23 Works

Lolium perenne BAC-end sequences

Ian Armstead
BAC-end sequences for HindIII and BstY1 Lolium perenne (perennial ryegrass) BAC libraries developed from genotype p226/135/16

Returning Zinj: Marking evolutionary history

Amy Staniforth
Overview This project responded to a Darwin Now scheme run by the British Council in 2009 to coincide with the Darwin Bicentenary celebrations in the UK and to encourage artists and researchers to develop work on evolution beyond the UK. Having completed her PhD (Becoming Human: Nostalgia, Nature and Nation in the search for human origins in twentieth century Tanzania, CWAS, University of Birmingham) in 2007 Dr Amy Staniforth was keen to document the Golden...

DeepPod: A convolutional Neural Network Based Quantification of Fruit Number in Arabidopsis

Gina Alessandra Garzon Martinez
Images used for manual annotation, training and test of a convolutional neural network. Images are in *.png format and manual data in .csv.

LpBAC5000

Ian Armstead
BAC DNA sequence contigs from the physical map minimum-tiling-path (MTP) for Lolium perenne genotype p226/135/16

Llangollen & Ruabon Parishes 1880 Ordnance Survey Map

John Roberts
Map has been annotated with details of water supply network, date unknown

Evolutionary genomics of anthroponosis in Cryptosporidium

Martin Swain, Justin Alexander Pachebat, Guy Robinson & Rachel M Chalmers
Genomes of cryptosporidium species used in the linked paper but embargoed on NCBI. Note that other genomes are already available via NCBI.

A viscous froth model adapted to wet foams

Denny Vitasari & Simon Cox
This dataset comprises the data from which we drew our conclusions concerning our extension of a “viscous froth” model to the dynamics of a wet foam in a Hele–Shaw cell. "lens_pb.fe" is a Surface Evolver input file from which all results are derived. We also provide the raw data (text files with extension .dat) which was generated from the Surface Evolver simulation code with different sets of parameters. Each .dat file consists of comma-separated columns...

Microbial genome sequences and taxonomic information based on the Genometa 2012 data set

Martin Swain
These files provide the NCBI taxonomic data for a cleaned up subset of fasta sequences from the Genometa paper by Davenport et al (PloS one 7.8 (2012): e41224 DOI: 10.1371/journal.pone.0041224). The text file "gi-taxonomy-maps.clean.txt" can be readily parsed, allowing the GI numbers in the fasta headers from Genometa to be mapped onto NCBI taxonomic information. This allows the species, genus etc of the genome sequences to be retrieved. There are also two fasta files based...

Supporting Information for Simulation of surfactant transport during the rheological relaxation of two-dimensional dry foams

Simon Cox & Francesca Zaccagnino
Data to supplement the article: F. Zaccagnino, A. Audebert and S.J. Cox (2018) Simulation of surfactant transport during the rheological relaxation of two-dimensional dry foams. For each of the figures listed in 00_Phys_Rev_E_98_022801_Data.pdf, which also gives contextual information, we provide the raw data (text files with extension .dat) which was generated by either the simulation code or the experiment (the two files with filenames ending "measurements.dat"). Each .dat file consists of comma-separated columns of numbers....

Lord of The Rings world audience database

Martin John Barker
This database contains all the responses (nearly 25,000) received to a questionnaire which was developed for use in the project, funded in the UK by the ESRC, to explore the launch and reception of The Lord of the Rings: III. This was a project involving researchers in twenty countries. Sponsorship: This research was made possible by a grant from the Economic and Social Research Council (ESRC Grant No. 000-22-0323)

HIV Prevalence and Armed Conflict BY INTENSITY Dataset v.2

Marie Louise Woodling & Colin McInnes
This Excel dataset complements the 'HIV Prevalence and Armed Conflict Dataset v.2'. In a similar vein, it also merges data on conflict from the UCDP/PRIO Armed Conflict dataset (v.4-2010) and data from UNAIDS which was prepared for the 2010 Report on the Global AIDS Epidemic, which details HIV prevalence between 1990-2009. However it differs from the aforementioned database by additionally indicating the INTENSITY of conflict in a given country. A key to understanding the dataset...

Supporting information for "Stability of a Twisted Plateau Border with Line Tension and Bending Stiffness"

Simon Cox
Surface evolver file: twister.fe Data from SE: For each set of simulated data on each of figures 4 to 6, there is a separate file, with file name containing by the figure number, the value of $T$ and the value of $B$. Each line is a critical value of the PB length $\ell$ and/or the twist angle $\theta$. This is the last line of data from a sequence of increasing $\ell$ or $\theta$, just before...

Lolium perenne BAC-based physical maps co-ordinates (Supplementary Table 4)

Ian Armstead
Clone co-ordinates of BAC-based physical maps assembled using FPC and LTC softwares from HICF data generated from Lolium perenne BAC libraries derived from genotype p226/135/16.

Rhododendron data on regeneration of communities in Snowdonia

Dylan Gwynn-Jones, Gruffydd Lloyd Jones, Anne Winters & John Scullion
Data to support publication, including community data, chemicals etc.

Simulating the interaction between a falling solid object and a soap film

Tudur Davies
Simulations were conducted in Surface Evolver, Version 2.70. See http://facstaff.susqu.edu/brakke/evolver/evolver.html, starting from the structure given in the file superquad_soapfilm_sim.fe. At each iteration, we dump information about the energy of the structure, the position and orientation of the super-quadric object, and the forces exerted on the object by the foam into the given data files. Information about the relevant parameters for each data file is given below. To generate the figures plotted in the paper, we...

Visual attention and cognition data set

Sebastian McBride
Visual attention data for all animals (columns A-E); data are the number of correct responses during each session (Sessions 1-4). Cognition data are the number of trails to reach the learning criterion during the 3 phases of the two-choice discrimination reversal task (columns G-J). The maximum number of trials within each phase of the task was set at 100.

µCT imaging raw data and data analysis of small grain cereals and their wild relatives

Candida Nobre Nibau & Nathan Hughes
micro CT raw data files (pre-processed tiffs) and image analysis files of grain and spike morphological traits (.csv).

Simulations of quasi-static foam flow through a diverging-converging channel

Simon Cox
Simulations were conducted in Surface Evolver, Version 2.71c. See http://facstaff.susqu.edu/brakke/evolver/evolver.html. We saved a dump file at each time step and from this extracted the information given below. For each of the two simulations (monodisperse, polydisperse) there are four files containing information required to reconstruct the fields of stress, texture, topological changes, and velocity. To generate the figures in the paper we analysed this data using bespoke C programs and plotted the result using gnuplot, Version...

HIV Prevalence and Armed Conflict Dataset v.2

Marie Louise Woodling & Colin McInnes
This Excel dataset was constructed by merging the UCDP/PRIO Armed Conflict dataset (v.4-2010) and data from UNAIDS which was prepared for the 2010 Report on the Global AIDS Epidemic, which details HIV prevalence between 1990-2009. Where the HIV prevalence of a country is shaded in yellow, the occurrence of conflict is indicated in the respective year.It is intended to give a straightforward and immediate impression of HIV prevalence rates during/ after conflict, thus providing scope...

Do educational digital films enhance patient COPD outcomes?

Liam Knox
Chronic Obstructive Pulmonary Disease (COPD) refers to a group of lung conditions characterized by airways inflammation, small airways obstruction and progressive loss of lung function. There are 900,000 people diagnosed with COPD in England and Wales but allowing for under-diagnosis, the true prevalence could be 1.5 million. Sufferers are extensive health care users; where COPD is the second most common cause of emergency hospital admission in the UK with direct NHS costs over £800 million...

Analysis of wheat grain traits using X-ray micro computed tomography

Nathan Hughes
This dataset is from an experiment ran at the National Plant Phenomics Centre, Wales. Using a new and novel CT analysis method which can be found at https://github.com/NPPC-UK/microCT_grain_analyser

The World Hobbit Project Database

Martin Barker
The World Hobbit Project (2013-4) was a major collaborative effort involving researchers in 46 countries, designed to gather audience responses to Peter Jackson’s film trilogy of JRR Tolkien’s book from across the world. Enabled by a small grant from the British Academy (to whom we acknowledge our thanks), the project garnered responses to an online questionnaire which was designed using the same basic ‘qualiquant’ methodology as the earlier Lord of the Rings international project. A...

Rhyddiaith y 15eg Ganrif

Richard Roberts, Sarah Rowles & Patrick Sims-Williams
Testunau o bum llawysgrif o’r 15fed ganrif Bwriad y prosiect yw digido rhyddiaith Gymraeg o’r llawysgrifau rhwng cyfnod y prosiect Rhyddiaith Gymraeg 1300–1425 a chyfnod y prosiect Corpws Hanesyddol yr Iaith Gymraeg 1500-1850

Registration Year

  • 2016
    6
  • 2017
    5
  • 2018
    5
  • 2019
    7

Resource Types

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    11
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    7
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    2
  • Image
    2
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    1