4D9OA4U2XA.pdb: PDB structures for the VP24 protein in Reston Ebola virus (PDBid:4D9OA) with with human karyopherin (KPNA; PDBid:4U2XD) docked, based on the Zaire Ebola virus (PDBid:4U2XA) as template. dockingKPNAtoRestonVP24.p1m: PyMol script used to dock KPNA to the modelled structure of Reston Ebola virus. 4U2XA.4U2XD.maxdist.out.sort: list of closest atoms of the residues of VP24 (PDBid:4U2XA) that make contact with KPNA (PDBid:4U2XD), sorted based on distances.
Fourier transform infrared photolysis difference spectra of CO- and NO-ligated inducible nitric oxide synthaseMichael Horn, Karin Nienhaus & Gerd Ulrich Nienhaus
Detailed information on the dataset can be found in the text file "Raw data legend".
Files containing the CD data for GraS, GraR and its different constructs, GraX and BceR (Fig. 11) are provided. The averaged raw data for Fig. 2b that were used to calculate the rate constant for phosphorylation are also provided.
Data from manipulative experiment to assess community effects of dogwhelk manipulation (addition of 10 dogwhelks to each of 5 x ~1.5 x 1.5 x 1.5 m boulders) or periwinkle manipulation (addition of 10 periwinkles to 5 different, but similar sized boulders).Richard Stafford & Rachel Williams
‘Before’ values are before manipulations, ‘after’ values are after 3 week period. Additional columns for dogwhelks and periwinkles indicate values immediately after manipulation and should equal ‘before’ values + 10 for the manipulated boulders. Treatment codes (final column) DW = dogwhelk manipulation, LL = periwinkle (Littorina littorea) manipulation, C = control
Acronyms: SCT: Stem cell transplantation; GVHD: Graft vs Host Disease; Chemo: chemotherapy; IS: Immunosuppression; URTI: Upper Respiratory Tract Infection; NFW: nasopharyngeal washing; BAL: Bronchi-alveolar Lavage; IFD: Indirect Immunofluorescence Assay; Chest CT: Chest Computed Tomography; HD: Hodgkin Disease; ALL: Acute Lymphoblastic Leukemia; CLL: Chronic Lymphoblastic Leukemia; MM: Multiple Myeloma; AML: Acute Myeloid Leukemia; CML: Chronic Myeloid Leukemia
AbN represents autoantibody negative control group in PANDA sample cohort; T1D denotes type 1 diabetes patients in PANDA cohort; DASP_B_Control is control group in DASP blind sample set; DASP_B_Patient is T1D patient group in DASP blind sample set; DASP_V_Control is control group in DASP verification sample set; DASP_V_Patient is T1D patient group in DASP verification sample set; Plate # indicates the # of storage plate the sample locates for PANDA samples; IS column is the...
This Excel file includes, in each cell, the mean voltage of the ERPs of one participant (lines: sub2 to sub38), for one electrode site (columns C3 to TP8) for one of the four 32 experimental conditions (SBd to SBs, that is, same&believe-different, to same&believe – same).
Please see README.txt in the zip file for precise details about the corpus and supplementary files. The updated zip file contains new files (Permutation_terms.txt, Non-Specific_miRNAs_Dictionary.txt and Word_variations.txt) and Table A has been updated
The dataset contains data files 1, 2, 3, 4, 5, 5a, 6 and 7. Detailed legends for each files can be found in the text file provided.
Fluorescence reporter assay data with assessing binding of insect repellents to the yellow fever mosquito (Culex quinquefasciatus) odorant binding protein AaegOBP1Gabriel M. Leal & Walter S. Leal
Fluorescence reporter was N-phenyl-1-naphthylamine (NPN). Insect repellents used were DEET, PMD, Picaridin and IR3535. Mosquito oviposition pheromone was used as a positive control. Please see ReadMe file for details regarding each file. Please see the associated article for methods.
Data was collected at the ICU in the Military Hospital of Tunis between Jan 2004 and Dec 2009, and between Jan 2011 and Dec 2013. PAM: Mean Arterial Pressure (mm Hg); HR: Heart Rate (beat/min); POD: Right Atrial Pressure (mm Hg); IC: Cardiac Index (L/min/m2); PAPO: Pulmonary Wedge Pressure (mm Hg); RVS: Systemic Vascular Resistance (dyne/s/cm2); SVO2: Mixed Venous Oxygen Saturation (%); PAP: Pulmonary arterial systolic pressure (mm Hg); Mean Pulmonary Arterial Pressure (mm Hg);...
Refer to Supplementary File 4 for details of questions asked and scoring system.
All data from the extensive review of the literature presented in the article are reported in tables. The following data are provided: articles referring to information theory as a tool for splice site mutation analysis; complete list of reviewed variants; indels, duplications and multinucleotide variants; deletrious natural site variants; branch point variants; type 1-2-3 cryptic splice site variants; validated variants; splicing mutation calculator data.
Dataset 1: Demographic characteristics of student respondents The numbers in the SPSS file have been coded as per the information provided below. Semester of study: Premed semester 1, 2- Premed semester 2, 3- Premed semester 3, 4- Premed semester 4, 5- MD (undergraduate medical program) semester 1, 6- MD (undergraduate medical program) semester 2, 7- MD (undergraduate medical program) semester 3, 8 - MD (undergraduate medical program) semester 4, 9- MD (undergraduate medical program) semester...
Detection of B. pseudomallei in Sputum using Selective Enrichment Broth and Ashdown’s Medium Compared to Standard CultureSomary Nhem, Joanne Letchford, Chea Meas, Sovanndeth Thann, James C. McLaughlin, Ellen Jo Baron & T. Eoin West
Specimens (Column A) were inoculated into selective enrichment broth before sub-culture onto Ashdown’s medium (Column B). Colonies that grew were tested using the oxidase test (Column C); oxidase-positive colonies were tested using a monoclonal antibody-based latex agglutination test for B. pseudomallei (Column D). The final results of this testing method are given in Column E. All sputum specimens were also cultured onto sheep blood, chocolate, and MacConkey agars. The results of standard culture are given...
Quantifications of the amount of fHbp in whole cell extracts from the serogroup W strains are shown in the file ‘Quantifications of fHbp.csv’. The analysis of NadA and fHbp expression in whole cell extracts is shown in the figure provided ‘NadA and fHBP expression.tif'. Details can be found in the text file provided.
Figure 3 data (sheet 1): Total counts for microalgae (blue, green and diatoms) included in Figure 3 in the manuscript for plots before and after harvest. Figure 3 data (sheet 2): Individual counts for microalgae.
Skin pigmentation was determined via reflective colorimetry and is represented by an *L score. The *L score was measured three times for each sample. The “A” column represents each donor. The “B,” “C,” and “D” columns represent the first, second, and third measured *L score respectively.
Cycle threshold (CT) values were calculated for BD3 and TBP (housekeeping genes) for each donor. CT values were determined in duplicate for each sample. The “A” column represents the donor. The “B” column represents the sample treatment for the donor. The “C” column represents the target mRNA measured. The “D” column represents the CT value determined for that sample.
Detailed legends for each dataset (Datasets a-f) can be found in the text file provided.
Genotype data for 1627 variants on 5p15.33 (hg19, chr5: 1,243,287-1,355,002) for 1074 individuals from 14 populationsLisa Mirabello, Charles C. Chung, Meredith Yeager & Sharon A Savage
Data were retrieved for 1627 variants on 5p15.33 (hg19, chr5: 1,243,287-1,355,002) for all individuals in the 14 populations (1092 individuals) included in the 1000 Genomes project (2012 February release). Eighteen potentially related individuals were removed, which resulted in 1074 individuals.
Legends describing each file can be found in the text file provided.
Mass spectrometry data performed to analyse the components of the Superdex 75 fraction are reported. The procedure was first performed with recombinant rTHB1.
Induction of fDTOX:GFP by ciprofloxacin and effect of chitosan in vitro. A. Growth curve: the E. coli C600DTOX:GFP strain was induced with ciprofloxacin and the optical density was measured at 600 nm at 0, 2, 4 and 6 hours after induction. Non-induced culture of E. coli C600DTOX:GFP strain was used as control. Chitosan was added at 2 or 4 hours after induction. B. Bacteriophage fDTOX:GFP titers: bacteriophage titers were determined at 0, 2, 4 and...
DNA sequencing file (DNA sequencing file for PCR.ab1) confirming single stranded template DNA was amplified as it is while DNA sequencing file (DNA sequencing file for PD-PCR.ab1) confirming that single stranded template DNA was amplified as per our proposed PD-PCR scheme within this manuscript.