13,673 Works

FireBrowse_Page_For_TCGA_Sarcoma_Publication

Broad Institute TCGA Genome Data Analysis Center

FireBrowse_Data_For_TCGA_BLCA_412_Publication

Broad Institute TCGA Genome Data Analysis Center

TCGA AWG Analyses for Liver Hepatocellular Carcinoma

Broad Institute TCGA Genome Data Analysis Center

Analysis Overview for Liver Hepatocellular Carcinoma (Primary solid tumor cohort) - 14 July 2016

Broad Institute TCGA Genome Data Analysis Center

Clustering of miRseq mature expression: consensus hierarchical

Broad Institute TCGA Genome Data Analysis Center

Clustering of miRseq mature expression: consensus NMF

Broad Institute TCGA Genome Data Analysis Center

Identification of putative miR direct targets by sequencing data

Broad Institute TCGA Genome Data Analysis Center

Clustering of miRseq precursor expression: consensus hierarchical

Broad Institute TCGA Genome Data Analysis Center

Clustering of miRseq precursor expression: consensus NMF

Broad Institute TCGA Genome Data Analysis Center

Clustering of mRNAseq gene expression: consensus hierarchical

Broad Institute TCGA Genome Data Analysis Center

Clustering of RPPA data: consensus hierarchical

Broad Institute TCGA Genome Data Analysis Center

Clustering of mRNAseq gene expression: consensus NMF

Broad Institute TCGA Genome Data Analysis Center

Clustering of RPPA data: consensus NMF

Broad Institute TCGA Genome Data Analysis Center

PARADIGM pathway analysis of mRNASeq expression and copy number data

Broad Institute TCGA Genome Data Analysis Center

Significant over-representation of pathway gene sets for a given gene list

Broad Institute TCGA Genome Data Analysis Center

PARADIGM pathway analysis of mRNASeq expression data

Broad Institute TCGA Genome Data Analysis Center

GSEA Class2: Canonical Pathways enriched in each subtypes of mRNAseq_cNMF in LIHC-TP

Broad Institute TCGA Genome Data Analysis Center

CHASM 1.0.5 (Cancer-Specific High-throughput Annotation of Somatic Mutations)

Broad Institute TCGA Genome Data Analysis Center

Mutation Assessor

Broad Institute TCGA Genome Data Analysis Center

Analysis of mutagenesis by APOBEC cytidine deaminases (P-MACD).

Broad Institute TCGA Genome Data Analysis Center

Mutation Analysis (MutSigCV v0.9)

Broad Institute TCGA Genome Data Analysis Center

Mutation Analysis (MutSig 2CV v3.1)

Broad Institute TCGA Genome Data Analysis Center

Mutation Analysis (MutSig v2.0)

Broad Institute TCGA Genome Data Analysis Center

Clustering of Methylation: consensus NMF

Broad Institute TCGA Genome Data Analysis Center

Correlation between gene mutation status and molecular subtypes

Broad Institute TCGA Genome Data Analysis Center

Publication Year

  • 2017
    2
  • 2016
    1,648
  • 2015
    3,088
  • 2014
    4,258
  • 2013
    4,677