3,740 Works

Svarteliste_ferskvannfisk_2017

Anders Finstad
Skript, filer og data for analyse av ekspansjonshastighet av fremmed ferskvannfisk for Norsk svarteliste 2017

Signal_vs_depth.m

Andreas Walther & Figshare Admin OSA
Code that gives an expected signal contrast-to-noise ratio for UOT and PAT optical imaging of organs deep inside scattering media

Svarteliste_ferskvannfisk_2017

Anders Finstad
Skript, filer og data for analyse av ekspansjonshastighet av fremmed ferskvannfisk for Norsk svarteliste 2017

ISO 10303-210:2000 AIM EXPRESS file

Thomas Thurman
EXPRESS schema for ISO 10303-210:2000.This schema is obsolete and is provided for archival purposes only.

PH.13.02.FS

Maja Zaloznik
Household Living Arrangements--FactsheetCode for data import and clean and visualisation of IPUMS data as poster/factsheet and shiny app.

H2MM analysis - Matlab scripts

Eitan Lerner & 0000-0002-0720-5426
These are the .m files that are essential for the H2MM analysis and usage of the Viterbi algorithm for calculation of state posterior probabilities and state assignments.
Documentation of code usage in H2MM analysis performed in this work, can be found, step-by-step in:essential_scripts_for_H2MM_analysis.m

Note 1: This set of .m files does not include all H2MM scripts. The core H2MM scripts not included in this library are given in Pirchi, Tsukanov et al., http://pubs.acs.org/doi/abs/10.1021/acs.jpcb.6b10726.The user should first and...

Code for calculation of R0, the Forster radius

Eitan Lerner & 0000-0002-0720-5426
This is a function I used for the calculation of the Forster radius and the overlap integral, shown in Table S1, from the input required according to Eq. S17.

Promoter open complex - Code for calculation of R0, the Forster radius

Eitan Lerner & 0000-0002-0720-5426
This is a function I used for the calculation of the Forster radius and the overlap integral, shown in Table S1, from the input required according to Eq. S17.

conformational dynamics of the transcription bubble in RNAP-promoter open complex - H2MM analysis - Matlab scripts

Eitan Lerner & 0000-0002-0720-5426
These are the .m files that are essential for the H2MM analysis and usage of the Viterbi algorithm for calculation of state posterior probabilities and state assignments.
Documentation of code usage in H2MM analysis performed in this work, can be found, step-by-step in:essential_scripts_for_H2MM_analysis.m

Note 1: This set of .m files does not include all H2MM scripts. The core H2MM scripts not included in this library are given in Pirchi, Tsukanov et al., http://pubs.acs.org/doi/abs/10.1021/acs.jpcb.6b10726.The user should first and...

conformational dynamics of the transcription bubble in RNAP-promoter open complex - Code for calculation of R0, the Forster radius

Eitan Lerner & 0000-0002-0720-5426
This is a function I used for the calculation of the Forster radius and the overlap integral, shown in Table S1, from the input required according to Eq. S17.

Scrub oak spread code

Christopher Baker
Code for "Oak habitat recovery on California’s largest islands: scenarios for the role of corvid-mediated dispersal."

Scrub oak spread code

Christopher Baker
Code for "Oak habitat recovery on California’s largest islands: scenarios for the role of corvid-mediated dispersal."

Caffemodel files and Python Examples

Seung Seog Han
# INSTALL PYCAFFE FIRST BEFORE USE THIS SCRIPT #Tutorial : Install PyCaffe
# Usage test.py

python test.py [test path] [train dataset] 0 0 [GPU_DEVICE=-1]

1) [test path]
ex) "c:\test dataset\b"ex) "c:\test dataset\b;c:\test dataset\c"
2) [train dataset]
asan : Asan train dataset aloneasanplus : Asan train + Atlas + MED-NODE dataset
3) [GPU device]
-1 : CPU (default)0~ : GPU device ID


# Usage roc.py
python roc.py [test path] [train dataset] 0 0 [target diagnosis] [GPU_DEVICE=-1]

1) [test path]
ex) "c:\test dataset\b"ex) "c:\test dataset\b;c:\test dataset\c"
2) [train dataset]
asan...

Matlab Code - Acoustic Scattering in IGA

Tahsin Khajah
Matlab code written in GeoPDEs to perform Isogeometric Analysis of Acoustic Scattering

Matlab Code - Acoustic Scattering in IGA

Tahsin Khajah
Matlab code written in GeoPDEs to perform Isogeometric Analysis of Acoustic Scattering

Matlab Code - Acoustic Scattering in IGA

Tahsin Khajah
Matlab code written in GeoPDEs to perform Isogeometric Analysis of Acoustic Scattering

even-keel

Michael Schiltz
“On an Even Keel”: Silver Risk, Trade Finance, and Hedging Strategies around the Turn of the Twentieth Century-- A guide to the construction of the database; a logbook on data visualizations, discarded research venues, software, etc.

even-keel

Michael Schiltz
“On an Even Keel”: Silver Risk, Trade Finance, and Hedging Strategies around the Turn of the Twentieth Century-- A guide to the construction of the database; a logbook on data visualizations, discarded research venues, software, etc.

Caffemodel files and Python Examples

Seung Seog Han
# INSTALL PYCAFFE FIRST BEFORE USE THIS SCRIPT #Tutorial : Install PyCaffe
# Usage test.py

python test.py [test path] [train dataset] 0 0 [GPU_DEVICE=-1]

1) [test path]
ex) "c:\test dataset\b"ex) "c:\test dataset\b;c:\test dataset\c"
2) [train dataset]
asan : Asan train dataset aloneasanplus : Asan train + Atlas + MED-NODE dataset
3) [GPU device]
-1 : CPU (default)0~ : GPU device ID


# Usage roc.py
python roc.py [test path] [train dataset] 0 0 [target diagnosis] [GPU_DEVICE=-1]

1) [test path]
ex) "c:\test dataset\b"ex) "c:\test dataset\b;c:\test dataset\c"
2) [train dataset]
asan...

Caffemodel files and Python Examples

Seung Seog Han
# INSTALL PYCAFFE FIRST BEFORE USE THIS SCRIPT #Tutorial : Install PyCaffe
# Usage test.py

python test.py [test path] [train dataset] 0 0 [GPU_DEVICE=-1]

1) [test path]
ex) "c:\test dataset\b"ex) "c:\test dataset\b;c:\test dataset\c"
2) [train dataset]
asan : Asan train dataset aloneasanplus : Asan train + Atlas + MED-NODE dataset
3) [GPU device]
-1 : CPU (default)0~ : GPU device ID


# Usage roc.py
python roc.py [test path] [train dataset] 0 0 [target diagnosis] [GPU_DEVICE=-1]

1) [test path]
ex) "c:\test dataset\b"ex) "c:\test dataset\b;c:\test dataset\c"
2) [train dataset]
asan...

combine_MMnGM.R

Karl Broman
R script that combines the data in MM_processed_files.zip and GM_processed_files.zip to make the merged MMnGM_processed_files.zip file.
Requires the qtl2convert package, https://github.com/rqtl/qtl2convert

combine_MMnGM.R

Karl Broman
R script that combines the data in MM_processed_files.zip and GM_processed_files.zip to make the merged MMnGM_processed_files.zip file.
Requires the qtl2convert package, https://github.com/rqtl/qtl2convert

parse_muga.R

Karl Broman
R script that converts the data in GM_primary_files.zip and MM_primary_files.zip and converts them to the forms useful for R/qtl2, in MM_processed_files.zip and GM_processed_files.zip.
Requires the qtl2convert package, https://github.com/rqtl/qtl2convert

parse_muga.R

Karl Broman
R script that converts the data in GM_primary_files.zip and MM_primary_files.zip and converts them to the forms useful for R/qtl2, in MM_processed_files.zip and GM_processed_files.zip.
Requires the qtl2convert package, https://github.com/rqtl/qtl2convert

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