808 Works

('At2_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

YieldPlantingSummer2009

Admin Admin
Yield was recorded as dry seed weight in grams in Experiment 2 with two replicates under each condition

rSurvival fruit mlp

Exposito-Alonso Moises
relative survival to reproduction (proportion of plants or 1/0 alive/dead) in Madrid low precipitation treatment and population (high density) replicate

rFitness mli

Exposito-Alonso Moises
relative lifetime fitness (# offspring including 0 when plant died) in Madrid low precipitation treatment and individual (low density) replicate

8W

Admin Admin
Number of days required for the bolt height to reach 5cm

Rb85

Salt David
Rubidium concentrations in leaves

('Cd111_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

clim-aet3

Exposito-Alonso Moises
Actual evapotranspiration of March (mm)

Mean(R) C

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

MRVA0

Julkowska Magdalena
EZ-Rhizo - Main Root Vector Angle at 0 mM NaCl

('LN22_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

LRDpMR75

Julkowska Magdalena
EZ-Rhizo - Lateral Root Density per cm of Main Root at 75 mM NaCl

LRDpBZ75

Julkowska Magdalena
EZ-Rhizo - Lateral Root Density per cm of Branching Zone at 75 mM NaCl

Silique 16

Admin Admin
The length of 5 siliques was measured for each accession after growth had concluded

TRS75

Julkowska Magdalena
EZ-Rhizo - Total Root Size (length) at 75 mM NaCl

Se82

Admin Admin
Selenium concentrations in leaves, grown in soil. Elemental analysis was performed with an ICP-MS (PerkinElmer). Sample normalized to calculated weights as described in Baxter et al., 2008

('FT_GH_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

DTF spain 2008 (2nd experiment)

Admin Admin
FT was recorded daily as days to flower after germination in Experiment 2 with four replicates under spain conditions.

rSurvival fruit mhi

Exposito-Alonso Moises
relative survival to reproduction (proportion of plants or 1/0 alive/dead) in Madrid high precipitation treatment and individual (low density) replicate

rSeeds mhi

Exposito-Alonso Moises
relative seed production (# offspring, excluding plants that died) in Madrid high precipitation treatment and individual (low density) replicate

('FT10_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

Germ in dark

Admin Admin
The ability to germinate in the dark at 4°C was measured as the percentage of non dormant seeds that can germinate during 1-week long cold exposure, in the absence of light

YEL

Admin Admin
Yellowing is a precocious,more diffused leaf chlorosis.Accessions were divided in three subgroups (mild, intermediate and severe) according to the severity of the yellowing.

1001 Genomes & easyGWAS

Grimm Dominik
Phenotypes from the 1001 Genomes Project and the easyGWAS publication

Registration Year

  • 2016
    153
  • 2017
    193
  • 2018
    9
  • 2019
    453

Resource Types

  • Dataset
    788
  • Collection
    20