149 Works

Collaboration through big data and open science

Mona Roman
This dataset has been developed as part of the project funded by European Union’s Horizon 2020 Research and Innovation Programme under grant agreement No. 693651, Science2Society. The dataset relates to the case study that examines how a Foundation could open its database for the benefit of open science and open innovation. The dataset features interview notes with the database owners (3), potential users (3) and open science experts (2) that have given permission to publish...

Gut microbial composition of C57BL/6J mice and levels of betaines in related samples

Ville Mikael Koistinen, Olli Kärkkäinen, Klaudyna Borewicz, Iman Zarei, Jenna Jokkala, Valérie Micard, Natalia Rosa-Sibakov, Seppo Auriola, Anna-Marja Aura, Hauke Smidt & Kati Hanhineva
1) The gut microbial composition of C57BL/6J mice fed with diets enriched with rye bran and wheat aleurone, analyzed with 16S rRNA sequencing. 2) Betaine levels in the colon contents of C57BL/6J mice fed with diets enriched with rye bran and wheat aleurone; 3) betaine levels in the caecal tissue of C57BL/6J mice fed with diets enriched with rye bran and wheat aleurone; 4) betaine levels in tissues of murine pathogen free (MPF) and germ-free...

The Tall Tower Dataset

Jaume Ramon & Llorenç Lledó
A dataset containing quality controlled wind observations from 183 different tall towers has been created. High resolution wind speed and wind direction measurements have been collected from existing tall towers around the world within the context of the INDECIS project in an effort to boost the utilization of these non-standard atmospheric datasets. Wind observations taken at several heights greater than 10 meters above ground level have been retrieved from various sparse datasets and compiled in...

HPC-Europa3 - D12.5 - Workload collocation based on container technologies to improve isolation

Rudyy, Oleksandr (BSC), Garcia-Gasulla, Marta (BSC) & Sirvent, Raül (BSC)
The aim of this report is to study containers resource isolation and explore Dynamic Resource Assignment techniques to maximize hardware utilization. Containers bring virtualization benefits to High-Performance Computing systems, thus allowing the safe execution of concurrent applications within the same computational node. In this situation it becomes possible to dynamically re-assign resources of multiples applications given their workload, maximizing the useful time the hardware is being used. Nevertheless, containers do not fully isolate their environment...

HPC-Europa3 - D12.4 - Orchestration of applications packaged as containers

Sébastien, Gadrat (CNRS)
This deliverable is providing a status report of the use of Singularity containers within a workflow manager. The main goal will be to highlight potential constraints when running a workflow of containerized applications. A few workflow managers will be selected and evaluated, then a real use case will be fully implemented.

HPC-Europa3 - D12.2 - Container-as-a-service Technical Documentation

Wilson, Niall (ICHEC)
This document contains technical documentation related to the installation and usage of a number of container technologies used for HPC applications. It also demonstrates how container images can be created and used on different systems

Disease PERCEPTION

Jon Sánchez Valle, Miguel Ponce De León & Jose María Fernandez
Disease PERCEPTION's database including: Patient-patient similarity network, stratified comorbidity network and the disease molecular similarity network (and their associated genes and drugs)

Sub-100-fs Kerr lens mode-locked Yb:Lu₂O₃ thin-disk laser oscillator operating at 21 W average power

Norbert Modsching
Data sets of the paper entitled "Sub-100-fs Kerr lens mode-locked Yb:Lu₂O₃ thin-disk laser oscillator operating at 21 W average power," N. Modsching, et. al., published in the journal Optics Express. Uploaded data sets agree in the filename with the figure number and sub-figure letter of the publication (FigXx).

Kindla ICP-IM vegetation data

Ulf Grandin
Vegetation data from the ICP Integrated Monitoring site Kindla, Sweden

Gårdsjön ICP-IM vegetation data

Ulf Grandin
Vegetation data from the ICP-Integrated monitoring site Gårdsjön

Gårdsjön ICP-IM vegetation data

Ulf Grandin
Vegetation data from the ICP-Integrated monitoring site Gårdsjön

Gammtratten ICP-IM vegetation data

Ulf Grandin
Vegetation data from two intensive monitoring plots at the ICP Integrated Monitoring site Gammtratten, Sweden.

CSB Minimum Income Protection Indicators database

[Unknown]
The CSB Minimum Income Protection Indicators database contains data on minimum income protection provisions for workers, people at working age not in work, and the elderly. Information on net disposable incomes is available since 1992 for 15 EU member states. From 2001 on, CSB-MIPI covers 27 countries, mostly EU member states. In addition, yearly time series on the evolution of gross benefit levels for the 1990s and 2000s are provided.

HPC-Europa3 - D12.3 - Using container technologies to improve portability of applications in HPC

Muscianisi, Giuseppa (CINECA)
The aim of this deliverable is to provide indications about how to use container to improve portability of applications on HPC systems. Important steps to run a containerized application in a HPC system include the combination of a container instance within the job batch scheduler available on the system. In the first sections, this deliverable is focused about the usage of MPI libraries, network interconnection drivers and accelerators within a container. Then, some considerations about...

D12.1- Container-as-a-service analysis report

Niall Wilson
The main goal of this report is to evaluate the use of container technology in order to streamline the deployment of HPC end-user applications. Each application to be deployed typically has a number of dependencies in terms of supported versions of the OS, compilers and linked libraries, which make the maintenance of the different installations complex and error prone on typical HPC systems. The implementation of a lightweight virtualization strategy can strongly improve both the...

Registration Year

  • 2019
    149

Resource Types

  • Other
    135
  • Text
    12
  • Dataset
    2

Data Centers

  • CSC - IT Center for Science
    147
  • Aalto University
    2