figshare

United Kingdom

197,507 Works

Additional file 9: Table S7. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Significant correlation of cytoscape network. (XLS 51 kb)

Additional file 8: Table S6. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Liver specific lncRNA analysis. (XLSX 349 kb)

Additional file 7: Table S5. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Classification and subgroup analysis of downregulated lncRNAs. (XLSX 92 kb)

Additional file 6: Table S4. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Classification and subgroup analysis of upregulated lncRNAs. (XLSX 206 kb)

Additional file 5: Table S3. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Significantly differentially expressed lncRNAs and mRNAs. (XLS 2545 kb)

Additional file 14: Table S12. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Target pathway enrichment. (XLSX 107 kb)

Additional file 13: Table S11. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Target GO enrichment. (XLSX 443 kb)

Additional file 12: Table S10. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
N vs C pathway enrichment. (XLSX 351 kb)

Additional file 11: Table S9. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
N vs C GO enrichment. (XLSX 1980 kb)

Additional file 2: Table S2. of Characterization of background noise in capture-based targeted sequencing data

Gahee Park, Joo Park, Seung-Ho Shin, Hyo-Jeong Jeon, Nayoung Kim, Yeon Kim, Hyun-Tae Shin, Eunjin Lee, Kwang Lee, Dae-Soon Son, Woong-Yang Park & Donghyun Park
Genes targeted for massively parallel sequencing. Table S3. Summary of sequencing metrics for 19 paired plasma and PBL DNA samples. Table S4. Acoustic shearing conditions. Table S5. Donor characteristics and KRAS variant allele frequency. (XLSX 19 kb)

Additional file 10: Table S8. of Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells

Qingsong Deng, Shihan Chen, Chunchuan Fu, Jiayun Jiang, Mengda Zou, Yunhua Tan, Xiaofei Wang, Feng Xia, Kai Feng, Kuansheng Ma & Ping Bie
Target prediction summary. (XLS 2 kb)

Additional file 4: Table S3. of Epidemiology of taeniosis/cysticercosis in Europe, a systematic review: Western Europe

Minerva Laranjo-González, Brecht Devleesschauwer, Chiara Trevisan, Alberto Allepuz, Smaragda Sotiraki, Annette Abraham, Mariana Afonso, Joachim Blocher, Luís Cardoso, José Correia Da Costa, Pierre Dorny, Sarah Gabriël, Jacinto Gomes, María Gómez-Morales, Pikka Jokelainen, Miriam Kaminski, Brane Krt, Pascal Magnussen, Lucy Robertson, Veronika Schmidt, Erich Schmutzhard, G. Smit, Barbara Šoba, Christen Stensvold, Jože Starič … & Veronique Dermauw
List of references included in the review made available through local sources. (XLSX 39 kb)

Additional file 3: Table S2. of Epidemiology of taeniosis/cysticercosis in Europe, a systematic review: Western Europe

Minerva Laranjo-González, Brecht Devleesschauwer, Chiara Trevisan, Alberto Allepuz, Smaragda Sotiraki, Annette Abraham, Mariana Afonso, Joachim Blocher, Luís Cardoso, José Correia Da Costa, Pierre Dorny, Sarah Gabriël, Jacinto Gomes, María Gómez-Morales, Pikka Jokelainen, Miriam Kaminski, Brane Krt, Pascal Magnussen, Lucy Robertson, Veronika Schmidt, Erich Schmutzhard, G. Smit, Barbara Šoba, Christen Stensvold, Jože Starič … & Veronique Dermauw
List of references included in the review retrieved through online international databases. (XLSX 30 kb)

Additional file 3: Figure S3. of Evaluation of left atrial volume and function using single-beat real-time three-dimensional echocardiography in atrial fibrillation patients

Qian Zhang, Ju-Fang Wang, Qing-Qing Dong, Qing Yan, Xiang-Hong Luo, Xue-Ying Wu, Jian Liu & Ya-Ping Sun
Manual tracking of the left atrial endocardium from healthy controls (A) and patient cases (B). (ZIP 1184 kb)

Additional file 2: Figure S2. of Evaluation of left atrial volume and function using single-beat real-time three-dimensional echocardiography in atrial fibrillation patients

Qian Zhang, Ju-Fang Wang, Qing-Qing Dong, Qing Yan, Xiang-Hong Luo, Xue-Ying Wu, Jian Liu & Ya-Ping Sun
Full volume image of the left atrium from healthy controls (A) and patient cases (B). (ZIP 1549 kb)

Additional file 1: Table S1. of Novel efficient genome-wide SNP panels for the conservation of the highly endangered Iberian lynx

Daniel Kleinman-Ruiz, Begoña Martínez-Cruz, Laura Soriano, Maria Lucena-Perez, Fernando Cruz, Beatriz Villanueva, Jesús Fernández & José Godoy
Genotypes of replicate samples. Table S2. Results of the Fisher’s exact test on differences in allele and genotype frequencies between sexes for the PDON pool. Table S3. Results of the Fisher’s exact test on differences in allele and genotype frequencies between sexes for the PAND pool. Table S4. Basic population genetics statistics per autosomal marker for both genetic pools. Table S5. Basic population genetics statistics per X-linked marker for both genetic pools. Table S6. Results...

MOESM1 of A rapid and efficient in vitro regeneration system for lettuce (Lactuca sativa L.)

Isabel Armas, Natalia Pogrebnyak & Ilya Raskin
Additional file 1. A spreadsheet containing all raw data generated and analyzed during this study. The first sheet contains the data for cultivar ‘RSL NFR’ and the second sheet contains the data for cultivar ‘Winter Density’.

Additional file 5: of Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

Vincent Prieur, Shannon Clarke, Luiz Brito, John McEwan, Michael Lee, Rudiger Brauning, Ken Dodds & BenoĂŽt Auvray
OvineGeneticMap.IMF.txt. This file contains information about physical and genetics positions for the entire sheep genome assembly (ISGC Oar_v3.1). The first line gives the correct setting to load it in the UCSC genome browser. This file contains four columns, the chromosome, and the physical position for the previous markers, the physical position for the markers, and the genetic position for a marker. (TXT 1492 kb)

Additional file 4: of Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

Vincent Prieur, Shannon Clarke, Luiz Brito, John McEwan, Michael Lee, Rudiger Brauning, Ken Dodds & BenoĂŽt Auvray
OvineExpectedRecombinationRate.txt. This file contains information about physical and expected recombination rate for the entire sheep genome assembly (ISGC Oar_v3.1). The first line gives the correct setting to load it in the UCSC genome browser. This file contains four columns, the chromosome, the physical position for the previous markers, the physical position for the markers, and the expected recombination rate between the two markers. (TXT 1492 kb)

Additional file 6: of Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize

Rurika Oka, Johan Zicola, Blaise Weber, Sarah Anderson, Charlie Hodgman, Jonathan Gent, Jan-Jaap Wesselink, Nathan Springer, Huub Hoefsloot, Franziska Turck & Maike Stam
List of primers used in ChIP-qPCR experiments. The first and second column indicate the loci the primers anneal to, and the name of the primer pairs, respectively. The right column indicates the sequences of the forward (F:) and reverse (R:) primers for each pair. (XLSX 12 kb)

Additional file 3: of Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

Vincent Prieur, Shannon Clarke, Luiz Brito, John McEwan, Michael Lee, Rudiger Brauning, Ken Dodds & BenoĂŽt Auvray
Description of the markers used for the analyses including physical position, number of informative meiosis, number of meiosis with known phase. (XLSX 320 kb)

Additional file 5: of Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize

Rurika Oka, Johan Zicola, Blaise Weber, Sarah Anderson, Charlie Hodgman, Jonathan Gent, Jan-Jaap Wesselink, Nathan Springer, Huub Hoefsloot, Franziska Turck & Maike Stam
List of tissue-specific and shared candidates and their linked genes. Columns from the left to right indicate: candidate chromosome location and coordinates and ID followed by chromosome coordinates, IDs, orientation, expression levels in V2-IST and husk of upstream and downstream adjacent genes. The significance of differential expression for flanking genes is indicated. NA means that the upstream or downstream gene did not fulfil the requirement to be associated as a target gene. (XLSX 171 kb)

Additional file 1: of MicroRNA profiling of ovarian granulosa cell tumours reveals novel diagnostic and prognostic markers

Wei-Tzu Cheng, Roseanne Rosario, Anita Muthukaruppan, Michelle Wilson, Kathryn Payne, Peter Fong, Andrew Shelling & Cherie Blenkiron
Clinico-pathological characteristics of GCT tumours included in this study. *Adult-GCT patient samples with unknown FIGO stage information and excluded from recurrence analysis; â  Adult-GCT patient sample with an aggressive clinical progression (progressive disease and tumour recurrence) and excluded from recurrence analysis; aClinical diagnosis based on histopathology; bStaged according to the International Federation of Gynaecology and Obstetrics (FIGO) system. (XLSX 13 kb)

Additional file 4: of Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize

Rurika Oka, Johan Zicola, Blaise Weber, Sarah Anderson, Charlie Hodgman, Jonathan Gent, Jan-Jaap Wesselink, Nathan Springer, Huub Hoefsloot, Franziska Turck & Maike Stam
Number of enhancer candidates overlapping with TEs in individual TE families. TE Superfamily column states which TE superfamily the TEs belong to, the TE family column provides the TE family IDs, the family members column lists the total number of elements remaining after removing short and intronic TEs (see methods). For V2-IST, Husk and total enhancer candidates, the number of candidates overlapping at least 80% with TEs within a family and the percent of TEs...

Additional file 1: of Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

Vincent Prieur, Shannon Clarke, Luiz Brito, John McEwan, Michael Lee, Rudiger Brauning, Ken Dodds & BenoĂŽt Auvray
Description of the population based on pedigree information. The description of the populations based on pedigree information is given. (XLSX 15 kb)

Resource Types

  • Dataset
    197,507

Publication Year

  • 2017
    13,279
  • 2016
    50,722
  • 2015
    58,608
  • 2014
    54,671
  • 2013
    18,217
  • 2012
    1,693
  • 2011
    289
  • 2010
    16
  • 2009
    8
  • 2008
    4

Data Centers

  • figshare Academic Research System
    197,494
  • figshare ASHA Publications
    6
  • St. Edward's University
    4
  • University College of Southeast Norway
    3