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Additional file 5: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

Na Zhang, Yun-Juan Bao, Amy Tong, Scott Zuyderduyn, Gary Bader, J. Malik Peiris, Si Lok & Suki Lee
Pathway enrichment of the mRNA genes inversely regulated with the targeting miRNAs for H1N1 and H5N1 virus-infected macrophage cells at 1-, 3-, and 6-h post-infection. (XLS 154 kb)

Additional file 5: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

Na Zhang, Yun-Juan Bao, Amy Tong, Scott Zuyderduyn, Gary Bader, J. Malik Peiris, Si Lok & Suki Lee
Pathway enrichment of the mRNA genes inversely regulated with the targeting miRNAs for H1N1 and H5N1 virus-infected macrophage cells at 1-, 3-, and 6-h post-infection. (XLS 154 kb)

Additional file 3: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

Na Zhang, Yun-Juan Bao, Amy Tong, Scott Zuyderduyn, Gary Bader, J. Malik Peiris, Si Lok & Suki Lee
Differential expression of the genes in response to H5N1 virus infection at 6-h post-infection. (XLS 8081 kb)

Additional file 4: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

Na Zhang, Yun-Juan Bao, Amy Tong, Scott Zuyderduyn, Gary Bader, J. Malik Peiris, Si Lok & Suki Lee
Differential expression of mature miRNAs with a minimum fold-change of 1.2. (XLS 137 kb)

Additional file 4: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

Na Zhang, Yun-Juan Bao, Amy Tong, Scott Zuyderduyn, Gary Bader, J. Malik Peiris, Si Lok & Suki Lee
Differential expression of mature miRNAs with a minimum fold-change of 1.2. (XLS 137 kb)

Additional file 3: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

Na Zhang, Yun-Juan Bao, Amy Tong, Scott Zuyderduyn, Gary Bader, J. Malik Peiris, Si Lok & Suki Lee
Differential expression of the genes in response to H5N1 virus infection at 6-h post-infection. (XLS 8081 kb)

MOESM2 of Optimization of cellulolytic enzyme components through engineering Trichoderma reesei and on-site fermentation using the soluble inducer for cellulosic ethanol production from corn stover

Yong-Hao Li, Xiao-Yue Zhang, Fei Zhang, Liang-Cai Peng, Da-Bing Zhang, Akihiko Kondo, Feng-Wu Bai & Xin-Qing Zhao
Additional file 2: Table S2. Identified secreted proteins induced by MGD and CS.

MOESM2 of Optimization of cellulolytic enzyme components through engineering Trichoderma reesei and on-site fermentation using the soluble inducer for cellulosic ethanol production from corn stover

Yong-Hao Li, Xiao-Yue Zhang, Fei Zhang, Liang-Cai Peng, Da-Bing Zhang, Akihiko Kondo, Feng-Wu Bai & Xin-Qing Zhao
Additional file 2: Table S2. Identified secreted proteins induced by MGD and CS.

OA Technology Options.xlsx

Ann Michael
Table from Delta Think February 2018 News & Views newsletter - with technology options for OA publishing. Table is a small SAMPLE of technology options mostly for online hosting. For context see: https://scholarlykitchen.sspnet.org/2018/02/22/open-access-technology-options/

OA Technology Options.xlsx

Ann Michael
Table from Delta Think February 2018 News & Views newsletter - with technology options for OA publishing. Table is a small SAMPLE of technology options mostly for online hosting. For context see: https://scholarlykitchen.sspnet.org/2018/02/22/open-access-technology-options/

Gain Control Parameters for SOA and LA.csv

Pablo Barrionuevo, Beatriz Matesanz, Alejandro Gloriani, Isabel Arranz De La Fuente, Luis Issolio, Santiago Mar & Juan Aparicio
Parameter values used for modeling gain control mechanism in light adaptation data.

datafile1

Saroj Tripathi, Kodo Kawase & Paul Ben Ishai
The tables summarize the data on sweat ducts measured for the subject pool.

Analysis of mixed correlated bivariate zero-inflated count and (k, l)-inflated beta responses with application to social network datasets

E. Tabrizi, E. Bahrami Samani & M. Ganjali
This paper presents a new model that monitors the basic network formation mechanisms via the attributes through time. It considers the issue of joint modeling of longitudinal inflated (0, 1)-support continuous and inflated count response variables. For joint model of mentioned response variables, a correlated generalized linear mixed model is studied. The fraction response is inflated in two points k and l (k < l) and a k and l inflated beta distribution is introduced...

Analysis of mixed correlated bivariate zero-inflated count and (k, l)-inflated beta responses with application to social network datasets

E. Tabrizi, E. Bahrami Samani & M. Ganjali
This paper presents a new model that monitors the basic network formation mechanisms via the attributes through time. It considers the issue of joint modeling of longitudinal inflated (0, 1)-support continuous and inflated count response variables. For joint model of mentioned response variables, a correlated generalized linear mixed model is studied. The fraction response is inflated in two points k and l (k < l) and a k and l inflated beta distribution is introduced...

Data S11 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S4, red squirrel detections and covariates for occupancy analysis

Data S11 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S4, red squirrel detections and covariates for occupancy analysis

Data S10 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S8, pine marten trap locations: “traps.csv”

Data S10 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S8, pine marten trap locations: “traps.csv”

Data S9 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S8, pine marten encounter histories: “enc.csv”

Data S9 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S8, pine marten encounter histories: “enc.csv”

Data S12 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S3, grey squirrel detections and covariates for occupancy analysis

Data S12 from The enemy of my enemy is my friend: Native pine marten recovery reverses the decline of the red squirrel by suppressing grey squirrel populations

Emma Sheehy, Chris Sutherland, Catherine OReilly & Xavier Lambin
Data for use with File S3, grey squirrel detections and covariates for occupancy analysis

Description of data from Developmental plasticity of the stress response in female but not in male guppies

L. Chouinard-Thuly, A. R. Reddon, I. Leris, R. L. Earley & S. M. Reader
Read me file containing the information about the data presented in the data set document.

Description of data from Developmental plasticity of the stress response in female but not in male guppies

L. Chouinard-Thuly, A. R. Reddon, I. Leris, R. L. Earley & S. M. Reader
Read me file containing the information about the data presented in the data set document.

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