1,945 Works

NCBI HomoloGene

The HomoloGene database provides a system for the automated detection of homologs among annotated genes of genomes across multiple species. These homologs are fully documented and organized by homology group. HomoloGene processing uses proteins from input organisms to compare and sequence homologs, mapping back to corresponding DNA sequences.

NCBI Nucleotide

The NCBI Nucleotide database collects sequences from such sources as GenBank, RefSeq, TPA, and PDB. Sequences collected relate to genome, gene, and transcript sequence data, and provide a foundation for research related to the biomedical field.

Sequence Read Archive

The Sequence Read Archive stores the raw sequencing data from such sequencing platforms as the Roche 454 GS System, the Illumina Genome Analyzer, the Applied Biosystems SOLiD System, the Helicos Heliscope, and the Complete Genomics. It archives the sequencing data associated with RNA-Seq, ChIP-Seq, Genomic and Transcriptomic assemblies, and 16S ribosomal RNA data.

Martha's Vineyard Coastal Observatory

The Martha's Vineyard Coastal Observatory (MVCO) is a leading research and engineering facility operated by Woods Hole Oceanographic Institution. The observatory is located at South Beach and in the ocean a mile off the south shore of Martha's Vineyard where it provides real time and archived coastal oceanographic and meteorological data for researchers, students and the general public.

Spitzer Heritage Archive

Spitzer is the final mission in NASA's Great Observatories Program - a family of four orbiting observatories, each observing the Universe in a different kind of light (visible, gamma rays, X-rays, and infrared). Spitzer is also a part of NASA's Astronomical Search for Origins Program, designed to provide information which will help us understand our cosmic roots, and how galaxies, stars and planets develop and form.

Tropical Ecology Assessment and Monitoring Network

TEAM is devoted to monitoring long-term trends in biodiversity, land cover change, climate and ecosystem services in tropical forests. Tropical forests received first billing because of their overwhelming significance to the global biosphere (e.g., their disproportionately large role in global carbon and energy cycles) and because of the extraordinary threats they face. About 50 percent of the species described on Earth, and an even larger proportion of species not yet described, occur in tropical forests....

Global Earth Observation Grid

The repository is no longer available. >>>!!!<<< 2019-12-03: no more access toGlobal Earth Observation Grid >>>!!!<<

Academic Seismic Portal at UTIG

>>>!!!<<< On June 1, 2020, the Academic Seismic Portal repositories at UTIG were merged into a single collection hosted at Lamont-Doherty Earth Observatory. Content here was removed July 1, 2020. Visit the Academic Seismic Portal @LDEO! https://www.marine-geo.org/collections/#!/collection/Seismic#summary (https://www.re3data.org/repository/r3d100010644) >>>!!!<<

Scientific Drilling Database

Projects in the International Scientific Continental Drilling Program (ICDP) produce large amounts of data. Since the start of ICDP, data sharing has played an important part in ICDP projects, and the ICDP Operational Support Group, which provides the infrastructure for data capturing for many ICDP projects, has facilitated dissemination of data within project groups. With the online Scientific Drilling Database (SDDB; http://www.scientificdrilling.org), ICDP and GeoForschungsZentrum Potsdam (GFZ), Germany created a platform for the public dissemination...

U.S. Antarctic Program Data Center

The U.S. Antarctic Program Data Center (USAP-DC) supports investigators funded by the National Science Foundation (NSF http://www.nsf.gov/ ) in documenting, preserving, and disseminating their research results. We register datasets in the Antarctic Master Directory (AMD http://gcmd.nasa.gov/portals/amd/ ) to comply with the Antarctic Treaty (http://www.ats.aq/e/ats.htm ); facilitate submission of datasets to long-term archives; and represent the U.S. in Scientific Committee on Antarctic Research (SCAR http://www.scar.org/data-products/scadm ) activities. USAP-DC is a member of the Interdisciplinary Earth Data...


InnateDB is a publicly available database of the genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection. The database captures an improved coverage of the innate immunity interactome by integrating known interactions and pathways from major public databases together with manually-curated data into a centralised resource. The database can be mined as a knowledgebase or used with our integrated bioinformatics and visualization tools...


The Plant Metabolic Network (PMN) provides a broad network of plant metabolic pathway databases that contain curated information from the literature and computational analyses about the genes, enzymes, compounds, reactions, and pathways involved in primary and secondary metabolism in plants. The PMN currently houses one multi-species reference database called PlantCyc and 22 species/taxon-specific databases.

Nationales Bildungspanel

The project analyzes educational processes in Germany from early childhood to late adulthood. The National Educational Panel Study (NEPS) has been set up to find out more about the acquisition of education in Germany, to plot the consequences of education for individual biographies, and to describe central educational processes and trajectories across the entire life span. Such an interdisciplinary consortium of research institutes, researcher groups, and research. personalities has been assembled in Bamberg. In addition,...

American FactFinder

>>>!!!<<< American FactFinder has been decommissioned and is no longer available. Data are now available at: data.census.gov >>>!!!<<< American FactFinder, maintained by the U.S. Census Bureau, is a source for United States population, housing, economic, and geographic data. The Census Bureau conducts nearly one hundred surveys and censuses every year. Note that by law, no one is permitted to reveal information from these censuses and surveys that could identify any person, household, or business.

RRUFF Project

The RRUFF Project is creating a complete set of high quality spectral data from well characterized minerals and is developing the technology to share this information with the world. The collected data provides a standard for mineralogists, geoscientists, gemologists and the general public for the identification of minerals both on earth and for planetary exploration.Electron microprobe analysis is used to determine the chemistry of each mineral.

National Center for Atmospheric Research

The NCAR is a federally funded research and development center committed to research and education in atmospheric science and related scientific fields. NCAR seeks to support and enhance the scientific community nationally and globally by monitoring and researching the atmosphere and related physical and biological systems. Users can access climate and earth models created to better understand the atmosphere, the Earth and the Sun; as well as data from various NCAR research programs and projects....

National Center for Education Statistics

The National Center for Education Statistics (NCES) is responsible for collecting and analyzing data related to education, including assessing the performance of students from early childhood through secondary education as well as the literacy level of adults and post-secondary education surveys. Users can access data on public and private schools as well as public libraries and a college navigator tool containing information on over 7,000 post-secondary institutions.


VectorBase provides data on arthropod vectors of human pathogens. Sequence data, gene expression data, images, population data, and insecticide resistance data for arthropod vectors are available for download. VectorBase also offers genome browser, gene expression and microarray repository, and BLAST searches for all VectorBase genomes. VectorBase Genomes include Aedes aegypti, Anopheles gambiae, Culex quinquefasciatus, Ixodes scapularis, Pediculus humanus, Rhodnius prolixus. VectorBase is one the Bioinformatics Resource Centers (BRC) projects which is funded by National Institute...

The Global Proteome Machine

The Global Proteome Machine (GPM) is a protein identification database. This data repository allows users to post and compare results. GPM's data is provided by contributors like The Informatics Factory, University of Michigan, and Pacific Northwestern National Laboratories. The GPM searchable databases are: GPMDB, pSYT, SNAP, MRM, PEPTIDE and HOT.


Rhea is a freely available and comprehensive resource of expert-curated biochemical reactions. It has been designed to provide a non-redundant set of chemical transformations for applications such as the functional annotation of enzymes, pathway inference and metabolic network reconstruction. There are three types of reaction participants (reactants and products): Small molecules, Rhea polymers, Generic compounds. All three types of reaction participants are linked to the ChEBI database (Chemical Entities of Biological Interest) which provides detailed...


ForestPlots.net is a web-accessible secure repository for forest plot inventories in South America, Africa and Asia. The database includes plot geographical information; location, taxonomic information and diameter measurements of trees inside each plot; and participants in plot establishment and re-measurement, including principal investigators, field assistants, students.

Human Protein Reference Database

Human Protein Reference Database (HPRD) has been established by a team of biologists, bioinformaticists and software engineers. This is a joint project between the PandeyLab at Johns Hopkins University, and Institute of Bioinformatics, Bangalore. HPRD is a definitive repository of human proteins. This database should serve as a ready reckoner for researchers in their quest for drug discovery, identification of disease markers and promote biomedical research in general. Human Proteinpedia (www.humanproteinpedia.org) is its associated data...

Human Proteinpedia

Human Proteinpedia is a community portal for sharing and integration of human protein data. This is a joint project between Pandey at Johns Hopkins University, and Institute of Bioinformatics, Bangalore. This portal allows research laboratories around the world to contribute and maintain protein annotations. Human Protein Reference Database (HPRD) integrates data, that is deposited in Human Proteinpedia along with the existing literature curated information in the context of an individual protein. All the public data...


The ClinicalCodes repository aims to hold code lists for all published electronic medical record studies, irrespective of code type (e.g. Read, ICD9-10, SNOMED) and database (CPRD, QResearch, THIN etc.). Once deposited, code lists will be freely available, with no login needed to download codes.


<<>>!!!>>> All GeoBase products are available on the Open Government of Canada portal: https://open.canada.ca/data/en/dataset?q=geobase&organization=nrcan-rncan GeoBase initiative provides geospatial data of the entire Canadian landmass for government, business, and/or personal assessments of sustainable resource development, public safety, sanitation, and environmental protection. Data is available for download as ESRI Shapefile, FGDB, KML, and GML.

Registration Year

  • 2015

Resource Types

  • Collection
  • Software
  • Dataset