Modeling Tumor in Hypoxic Condition

This is a class project that aims modeling two-species biofilm that grows on a wound

An example Jupyter Notebook

Simulate assembly of nanoparticles into aggregates in physiological conditions

The Ions in Nanoconfinement app empowers users to simulate ions confined between material surfaces that are nanometers apart, and extract the associated ionic structure.

2D simulation of tumor heterogeneity

PhysiCell model of immune cells attacking a heterogeneous tumor

Calculates basic properties of interest with a given interatomic potential and is used to drive the calibration of the potential.

PhysiCell demonstration of biased random cell migration

Users Manual and Examples for Jupyter

Uses DAKOTA to perform deterministic and Bayesian calibration

Training application for "Motility" concept in PhysiCell.

Training application for "Motility" concept in PhysiCell.

2D simulation of biorobots delivering a drug to cancer cells

Assembles all possible configurations of a structural level in a Hierarchical Material.

This modules simulates both the standard diffusion and concentration-dependent diffusion.

2D sim of director, worker, and cargo cells.

2D sim of director, worker, and cargo cells.

2D sim of director, worker, and cargo cells.

2D simulation of biorobots delivering a drug to cancer cells

PhysiCell model of immune cells attacking a heterogeneous tumor

PhysiCell model of immune cells attacking a heterogeneous tumor

2D sim of director, worker, and cargo cells.

An ABM simulating the liver tissue mechanobiology on cancer metastatic seeding with PhysiCell

Visualize different crystal lattices and planes