Purdue University West Lafayette

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PURDUE Direct member

169 Works

PhysiCell: invader-scout-attacker system

Paul Macklin & Randy Heiland
Simulation Tool published via nanoHUB
PhysiCell model of an invader-scout-attacker multicellular system
No citations were reported. No usage information was reported.
https://doi.org/10.21981/j6p4-nf32 Cite

Volume Training App for PhysiCell

Furkan Kurtoglu & Aneequa Sundus
Simulation Tool published via nanoHUB
Training application for "Volume" concept in PhysiCell.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/wb4t-6c19 Cite

Crystal Viewer Tool

Yuanchen Chu, Daniel Mejia, Fan Chen, James Fonseca, Michael Povolotskyi & Gerhard Klimeck
Simulation Tool published via nanoHUB
Visualize different crystal lattices and planes
No citations were reported. No usage information was reported.
https://doi.org/10.21981/k3ek-r382 Cite

Nanoparticle Shape Lab

JCS Kadupitiya, Nicholas Brunk & Vikram Jadhao
Simulation Tool published via nanoHUB
Simulates the low-energy shapes of nanocontainers over a wide range of solution conditions
No citations were reported. No usage information was reported.
https://doi.org/10.21981/w21r-by03 Cite

A virion endocytosis tissue simulator

Yafei Wang, Randy Heiland & Paul Macklin
Simulation Tool published via nanoHUB
Simulate virus endocytosis (internalization), ACE2 receptor dynamics with PhysiCell
No citations were reported. No usage information was reported.
https://doi.org/10.21981/nwxr-ke91 Cite

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski & Peter Kolis
Simulation Tool published via nanoHUB
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/npm7-vp26 Cite

pc4thanos : Thanos vs. Avengers multicellular demonstrator

Paul Macklin
Simulation Tool published via nanoHUB
PhysiCell Thanos vs. Avengers demonstrator for multicellular simulation techniques
No citations were reported. No usage information was reported.
https://doi.org/10.21981/5hcw-vc96 Cite

Mechanics Training App for PhysiCell

Furkan Kurtoglu, Aneequa Sundus, Randy Heiland & Paul Macklin
Simulation Tool published via nanoHUB
Training application for "Mechanics" concept in PhysiCell.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/w5cq-gq52 Cite

LAMMPS Input Structure Generator for Functionally Graded Materials (FGM)

, Mahmudul Islam, Abdullah Amin, Satyajit Mojumder &
Simulation Tool published via nanoHUB
Generates initial geometries of Functionally Graded Materials (FGM) for LAMMPS simulations
No citations were reported. No usage information was reported.
https://doi.org/10.21981/c11p-9b13 Cite

PSPHV LDMOS

Colin McAndrew
Compact Models published via nanoHUB
PSPHV consists of an enhanced PSP103.6 model for the core MOS transistor, an updated JFETIDG model for the drift region, JUNCAP2 for the pn-junction diodes, and two 3-terminal MOS capacitors based on PSP for the gate-drain overlap capacitance.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/nk3r-w064 Cite

PhysiCell model for COVID19

Randy Heiland & Paul Macklin
Simulation Tool published via nanoHUB
Prototype 2-D multicellular simulation of COVID19.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/j6sp-j909 Cite

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Simulation Tool published via nanoHUB
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/c8e4-br73 Cite

PhysiCell model for tumor hypoxia

Lima Heber, Paul Macklin & Furkan Kurtoglu
Simulation Tool published via nanoHUB
Multicellular simulation in 2-D of tumor hypoxia.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/4qsm-t269 Cite

Molecular Spectroscopy

Michael Reppert
Simulation Tool published via nanoHUB
Front-end for content of Purdue course CHM676 (Molecular Spectroscopy).
No citations were reported. No usage information was reported.
https://doi.org/10.21981/sp8y-t106 Cite

PSPHV LDMOS

Colin McAndrew & Kejun Xia
Compact Models published via nanoHUB
PSPHV consists of an enhanced PSP103.6 model for the core MOS transistor, an updated JFETIDG model for the drift region, JUNCAP2 for the pn-junction diodes, and two 3-terminal MOS capacitors based on PSP for the gate-drain overlap capacitance.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/h8tz-rm88 Cite

SEM Image Processing Tool

Joshua Schiller, Matthew Robertson, Kristina Miller, Kevin Cruse, Kevin Liu, Darren Adams, Benjamin Galewsky, Elif Ertekin & Sameh Tawfick
Simulation Tool published via nanoHUB
Analysis and feature detection in SEM images of Graphene.
1 citation
No usage information was reported.
https://doi.org/10.21981/8w7x-7v98 Cite

PhysiCell biorobots simulation

Randy Heiland & Paul Macklin
Simulation Tool published via nanoHUB
2D sim of director, worker, and cargo cells.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/09v3-j053 Cite

Florida Ferroelectric Tunnel Junction Device Model

Tong Wu & Jing Guo
Compact Models published via nanoHUB
A compact model of the Ferroelectric Tunnel Junctions (FTJs) device is constructed, using the Wentzel–Kramers–Brillouin (WKB) approximation for tunneling current calculation.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/6tfd-gw48 Cite

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Simulation Tool published via nanoHUB
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/0497-1z62 Cite

PhysiBoSSa Simulation with ECM

Marco Ruscone, Vincent Noel, Laurence Calzone, Gaelle Letort & Arnau Montagud
Simulation Tool published via nanoHUB
Agent based multicellular simulation with extracellular matrix interaction
No citations were reported. No usage information was reported.
https://doi.org/10.21981/etd2-k596 Cite

PhysiBoSSa Simulation with ECM

Marco Ruscone, Vincent Noel, Laurence Calzone, Gaelle Letort & Arnau Montagud
Simulation Tool published via nanoHUB
Agent based multicellular simulation with extracellular matrix interaction
No citations were reported. No usage information was reported.
https://doi.org/10.21981/7ej8-0x59 Cite

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Simulation Tool published via nanoHUB
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/72ak-4v11 Cite

Polymer Modeler

Benjamin Haley, Nate Wilson, Chunyu Li, Andrea Arguelles, Eugenio Jaramillo & Alejandro Strachan
Simulation Tool published via nanoHUB
Build thermoplastic polymer chains and run LAMMPS to relax the chains and study mechanical properties
1 citation
No usage information was reported.
https://doi.org/10.21981/tmvb-ha42 Cite

PhysiBoSS simulation of COVID19 infection

Vincent Noel, Miguel Leon, Alfonso Valencia & Arnau Montagud
Simulation Tool published via nanoHUB
PhysiBoSS simulation of COVID19 infection based on Paul Macklin's PhysiCell simulation
No citations were reported. No usage information was reported.
https://doi.org/10.21981/r3kd-e771 Cite

Compact NEGF-Based Solver for Double-Gate MOSFETs

Fabian Hosenfeld & Alexander Kloes
Simulation Tool published via nanoHUB
Fast simulation of the DC current in a nanoscale double-gate MOSFET including thermionic emission and source-to-drain tunneling current.
No citations were reported. No usage information was reported.
https://doi.org/10.21981/p0yv-6x14 Cite

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