169 Works

pc4nanobio: cancer nanotherapy simulator

Randy Heiland, Yafei Wang & Paul Macklin
Simulate cancer response to drug-loaded nanoparticles

Protein Contact Maps

Benjamin Rafferty, Zachary Flohr & Ashlie Martini
Create and view protein contact maps and distance maps.

PhysiBoSS simulation of COVID19 infection

Vincent Noel
PhysiBoSS simulation of COVID19 infection based on Paul Macklin's PhysiCell simulation

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.

PhysiCell model for COVID19

Randy Heiland & Paul Macklin
Prototype 2-D multicellular simulation of COVID19.

Bound States Calculation Lab

Pranay Baikadi, Michael Povolotskyi, Viswanathan Nolastname, Dragica Vasileska, Xufeng Wang & Gerhard Klimeck
Calculates bound states for square, parabolic, triangular and V-shaped potential energy profile

MOOSE Simulation Environment

Steven Clark, Larry Aagesen & Daniel Schwen
Idaho National Laboratory's MOOSE (Multiphysics Object Oriented Simulation Environment)

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.

Cycle Training App for PhysiCell

Furkan Kurtoglu & Aneequa Sundus
Training application for "Cycle" concept in PhysiCell.

Feature Selection for Machine Learning

Zachary McClure & Alejandro Strachan
Assessing feature selection for machine learning models

Machine-learning Assisted Virtual Exfoliation via Liquid Phase

Alireza Moradzadeh, Narayan Aluru & Darren Adams
Finds the optimal solvent for exfoliation via liquid phase combining machine learning algorithms and molecular dynamics simulations

Polymer Crystal Structure Generator and Analysis Software - PolymerXtal

Tongtong Shen, Jessica Nash & Alejandro Strachan
PolymerXtal is a software designed to build and analyze molecular-level polymer crystal structures.

VEDA: Virtual Environment for Dynamic AFM

Daniel Kiracofe, John Melcher, Arvind Raman, Sudharsan Balasubramaniam, Steven Johnson & Shuiqing Hu
A suite of dynamic AFM simulators for air/liquid/vacuum on soft or hard samples.

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.

Compact NEGF-Based Solver for Double-Gate MOSFETs

Fabian Hosenfeld & Alexander Kloes
Fast simulation of the DC current in a nanoscale double-gate MOSFET including thermionic emission and source-to-drain tunneling current.

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.

PNJunction Lab Exploration Tool

Daniel Mejia, Alejandro Strachan & Saaketh Desai
PNJunction Lab Exploration Tool

Microenvironment Concept Training App for PhysiCell

Aneequa Sundus
Training application for "Microenvironment" concept in PhysiCell.

Purdue ME 581-Numerical Methods in Engineering Using Jupyter Notebooks

Martin Hunt, Marisol Koslowski, Peter Kolis, Meredith Meyer, Akshay Dandekar & Camilo Duarte-Cordon
Jupyter notebooks with an introduction to python and examples for Numerical Methods in Engineering.

Feature Selection for Machine Learning

Zachary McClure & Alejandro Strachan
Assessing feature selection for machine learning models

IAV Kinetics Module

Module explaining the in-host viral kinetics of IAV under different conditions.

PhysiCell biorobots simulation

Randy Heiland & Paul Macklin
2D sim of director, worker, and cargo cells.

PhysiCell for tumor heterogeneity

Randy Heiland & Paul Macklin
2D simulation of tumor heterogeneity

Nanoparticle Assembly Lab

Nicholas Brunk, JCS Kadupitiya, Masaki Uchida, & Vikram Jadhao
Simulate assembly of nanoparticles into aggregates in physiological conditions.

Registration Year

  • 2020
    169

Resource Types

  • Software
    169