Data from: De novo assembly of two Swedish genomes reveals missing segments from the human GRCh38 reference and improves variant calling of population-scale sequencing dataAdam Ameur & Ulf Gyllensten
De novo assembly of two individuals from the SweGen dataset
Data from: Acute sleep loss results in tissue-specific alterations in epigenetic state and metabolic fuel utilization in humansJonathan Cedernaes & Christian Benedict
RNA-seq data and DNA methylation array data from 15 study participants. Biopsies were takes from adipose tissue and muscle, on two occasions: after a night of normal sleep and after a night of total sleep deprivation.
SweGen dataset from SweGen: A whole-genome map of genetic variability in a cross-section of the Swedish populationAdam Ameur, Robert Karlsson, Patrik Magnusson & Ulf Gyllensten
A high-quality map of genetic variation in the Swedish population based on a representative cross-section of 1000 individuals.
Metatranscriptomic data of antagonistic interaction between cyanobacteria and heterotrophic bacteria after 24 h incubation time
Structure and sequence analysis of Alcohol Dehydrogenase 5.
Data from: Function of isolated pancreatic islets from patients at onset of type 1 diabetes; Insulin secretion can be restored after some days in a non-diabetogenic environment in vitro. Results from the DiViD study.Lars Krogvold, Oskar Skog, Görel Sundström, Bjørn Edwin, Trond Buanes, Kristian F Hanssen, Johnny Ludvigsson, Manfred Grabherr, Olle Korsgren & Knut Dahl-Jørgensen
RNA-Sequencing reads from pancreatit islets.
Data from: Peacefully extreme - loss of combative strategies in the unstressed, sugar-xerophilic mould, Xeromyces bisporusSu-Lin L. Leong, Henrik Lantz, Olga Vinnere-Pettersson, Jens C. Frisvad, Ulf Thrane, Hermann J. Heipieper, Jan Dijksterhuis, Manfred Grabherr, Mats Pettersson, Christian Tellgren-Roth & Johan Schnurer
Annotation in GFF3-format for the draft genome of Xeromyces bisporus. Genome available for download at EMBL, accession nr. PRJEB6149.
Data from: Strong genetic, clinical and lifestyle effects on biomarker variation: towards the use of personalized cut-offsStefan Enroth, Åsa Johansson, Sofia Bosdotter Enroth & Ulf Gyllensten
Summary statistics from the GWAS on circulating plasma protein levels.
Data from: Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanicsAnders S. Christensen, Troels E. Linnet, Mikael Borg, Wouter Boomsma, Kresten Lindorff-Larsen, Thomas Hamelryck & Jan H. Jensen
Ensembles of protein structures resulting from Monte Carlo simulations. Each archive contains four independent simulations from the same starting structure and identical settings, but different random seeds.