418 Works

Generic rat heart scaffold

Richard Christie, Mahyar Osanlouy & Peter Hunter
Annotated heart scaffold for rat available for registration of segmented neural anatomical-functional mapping of cardiac neural circuits.

Generic mouse stomach scaffold

Mabelle Lin, Richard Christie & Peter Hunter
Annotated mouse stomach scaffold available for registration of segmented neural anatomical-functional mapping of enteric neural circuits.

Quantified morphology of the human vagus nerve with anti-claudin-1

Nicole A Pelot, J Ashley Ezzell, Gabriel B Goldhagen, Jake E Cariello, Kara A Clissold & Warren M Grill
Quantified vagus nerve morphology across species

Jupyter Voila Interactive Data Analysis

Katie Zhuang & Million Mulugeta
Example use of voila - a JupyterLab extension that creates interactive web pages from an iPython Notebook. The example goes through data exploration and analysis of effects of stimulation on colon motility, based on a SPARC dataset.

Spatial mapping and contextualization of axon subtypes innervating the long bones of C3H and B6 mice

Madelyn Lorenz, Jennifer M Brazill, Alec Beeve, Ivana Shen & Erica L Scheller
A dataset containing high-resolution confocal images of tranverse cross-sections of the C57BL/6J and C3H/HeJ femur and tibia that have been stained with anti-CGRP (sensory nerve), anti-TH (sympathetic nerve), anti-perilipin (adipocytes), and dapi (nuclei)

Jupyterlab exploration of computational models of unmyelinated peripheral axons

Katie Zhuang & Nicole A Pelot
Example JupyterLab environment used to compile, run and display results of neural computational models, based on a SPARC dataset (https://doi.org/10.26275/iiwv-k07f)

Acute Wired Colonic Monitor of Conscious Activity (ColoMOCA) implantation in pig bowel

Margot Damaser, Dennis Bourbeau, Steve Majerus, Ian McAdams, Jun Yang, Anna Rietsch, Brett Hanzlicek & Aref Smiley
A FitBit for the Bladder

Generic human heart scaffold

Richard Christie, Mahyar Osanlouy & Peter Hunter
Annotated heart scaffold for human available for registration of segmented neural anatomical-functional mapping of cardiac neural circuits.

Generic rat brainstem scaffold

Shelley Fong, Arti Sukasem, Richard Christie & Peter Hunter
whole-body

Human whole-body with embedded organs

Elias Soltani, Richard Christie & Peter Hunter
The generated body scaffold was fitted to data and the organ fiducial markers were embedded in the human whole-body. The landmarks were obtained from image data and also were defined in the body scaffold.

Simulations of pelvic and vagus neural interface anatomy-dependent stimulus and recording properties

Calvin D Eiber, Sophie Payne, Peregrine Osborne, Janet R Keast & James Fallon
ViNERS (Visceral Nerve Ensemble Recording & Stimulation) peripheral neural interface modelling environment

Generic human stomach scaffold

Mabelle Lin, Richard Christie & Peter Hunter
Annotated human stomach scaffold available for registration of segmented neural anatomical-functional mapping of enteric neural circuits.

Generic cat bladder scaffold

Zohreh Ekhlasi, Richard Christie & Peter Hunter
Annotated bladder scaffold for cat available for registration of segmented neural anatomical-functional mapping of LUT neural circuits.

Small Enteric Neural Network Simulator

Joel Bornstein
This network is designed to study the interactions of different types of synaptic potentials in a realistic enteric neuron and the effects of varying the voltage-dependent ion channels in the output neuron membrane. Caption: Simulated neuron voltage

Multi-scale rabbit cardiac electrophysiology models

Manuel Guidon, Mao-Tsuen Jeng, Pei-Chi Yang & Timothy J. Lewis
A computational workflow for integration and implementation of a reusable and reproducible rabbit cardiac multi-scale electrophysiology model. Caption: Illustration of ion channels and action potential propogation in cardiac tissue

3D Visualization

Esra Neufeld
Three-dimensional representation of the effects of a stimulating electrode around a bundle of nerve fibers. Caption: Image of neuron stimulation model with electric field lines and gradient.

Influence of acute thoracolumbar root nerves electrical stimulation on colonic motility in anesthetized male Yucatan minipigs

Muriel Larauche, Yushan Wang, Yan-Peng Chen, Wentai Liu & Million Mulugeta
Acute thoracolumbar nerve electrical stimulation; monitor colon manometry in all regions (proximal, transverse and distal) before, during and post stimulation.

Multi-scale rabbit cardiac electrophysiology models

Timothy J. Lewis, Mao-Tsuen Jeng & Pei-Chi Yang
A computational workflow for integration and implementation of a reusable and reproducible rabbit cardiac multi-scale electrophysiology model. Caption: Illustration of ion channels and action potential propogation in cardiac tissue.

Multi-scale human cardiac electrophysiology models

Pei-Chi Yang, Colleen E. Clancy, Timothy J. Lewis & Mao-Tsuen Jeng
A computational workflow for integration and implementation of a reusable and reproducible human cardiac multi-scale electrophysiology model. Caption: Illustration of ion channels and action potential propogation in cardiac tissue

Multi-scale rabbit cardiac electrophysiology models

Timothy J. Lewis, Mao-Tsuen Jeng & Pei-Chi Yang
A computational workflow for integration and implementation of a reusable and reproducible rabbit cardiac multi-scale electrophysiology model. Caption: Illustration of ion channels and action potential propogation in cardiac tissue.

Fabbri-based composite SAN model

Alan Garny & Peter Hunter
CellML version of the Fabbri et al. 2017 human sinoatrial node (SAN) cell model and an ODE-based version of the Gerstner & Kistler 2002 brain stem model combined to demonstrate the effect of brain stem activity on heart rate

Chemogenetic activation or inhibition of cholinergic or nitrergic myenteric neurons of mouse colon

Thomas Gould
Tension files of the colon after chemogenetic activation and inhibition of of cholinergic or nitrergic myenteric neurons

Optogenetic inhibition of nitrergic and cholinergic neurons of murine colonic myenteric plexus

Dante Heredia & Thomas Gould
Tension files of the colon after optogenetic inhibition of cholinergic or nitrergic myenteric neurons

Generic mouse colon scaffold

Mabelle Lin, Richard Christie & Peter Hunter
Annotated mouse colon scaffold available for registration of segmented neural anatomical-functional mapping of enteric neural circuits.

CLARITY and three-dimensional (3D) imaging of the mouse and porcine colonic innervation

Pu-Qing Yuan, Lixin Wang, Million Mulugeta & Yvette Tache
3D imaging, colon, innervation, enteric nerve system, phenotyping

Registration Year

  • 2022
    82
  • 2021
    138
  • 2020
    87
  • 2019
    111

Resource Types

  • Dataset
    418