502 Works

Spatial distribution and morphometric characterization of vagal afferents (intramuscular arrays (IMAs)) within the longitudinal and circular muscle layers of the rat stomach

Bartek Rajwa, Bartek Rajwa, Cherie N Hudson, Deborah M Jaffey, Elizabeth Baronowsky, Felecia N Martin, Jennifer McAdams & Terry L Powley
Spatial distribution and morphometric characterization of vagal afferents (specifically: intramuscular arrays (IMAs)) within the longitudinal and circular muscle layers of the rat stomach.

Pig vagus nerve TH (tyrosine hydroxylase) and ChAT (choline acetyltransferase) positive fibers

Nicole A Pelot, J Ashley Ezzell, Jake E Cariello, Gabriel B Goldhagen, Kara A Clissold & Warren M Grill
Previously published as Duke_GrillPelot_OD025340_PigVagusNerve_TH_ChAT. The dataset provides immunohistological images of cross-sections of pig vagus nerves, identifying ChAT+ and TH+ fibers.

Anatomical Model Viewer

Ignacio Pascual
Render different human tissue types in three dimensions with the option to highlight or segment parts of: musculature, vasculature, nerve tissue, viscera and skeletal structure. Caption: Screenshot of anatomical viewer with subject Jeduk

2D Plot

Ignacio Pascual
Interactive example for plotting gene expression using the RAW Graphs platform. Data are obtained from Prof. Leah Resnikov at University of Florida.

CLARITY and three-dimensional (3D) imaging of the mouse and porcine colonic innervation

Pu-Qing Yuan
Regional ENS 3D structure/phenotype, axonal projections and connectivity in the mouse and pig colon.

Multi-scale rabbit cardiac electrophysiology models

Manuel Guidon, Mao-Tsuen Jeng, Pei-Chi Yang & Timothy J. Lewis
A computational workflow for integration and implementation of a reusable and reproducible rabbit cardiac multi-scale electrophysiology model.

SPARC Nerve Activity Predictor (SNAP)

Matthew P Ward
Interactive, AI-informed computational model of stimulus parameter-dependent vagal nerve responses resulting from bipolar, constant-current stimuli.

Multi-scale rabbit cardiac electrophysiology models

Manuel Guidon, Mao-Tsuen Jeng, Pei-Chi Yang & Timothy J. Lewis
A computational workflow for integration and implementation of a reusable and reproducible rabbit cardiac multi-scale electrophysiology model.

Multi-scale human cardiac electrophysiology models

Colleen E. Clancy, Pei-Chi Yang & Timothy J. Lewis
A computational workflow for integration and implementation of a reusable and reproducible human cardiac multi-scale electrophysiology model.

Multi-scale human cardiac electrophysiology models

Colleen E. Clancy, Mao-Tsuen Jeng, Pei-Chi Yang & Timothy J. Lewis
A computational workflow for integration and implementation of a reusable and reproducible human cardiac multi-scale electrophysiology model. Caption: Illustration of ion channels and action potential propogation in cardiac tissue

Vagus nerve stimulation promotes gastric emptying by increasing pyloric opening measured with magnetic resonance imaging

Bartek Rajwa, Bartek Rajwa, Deborah M. Jaffey, Jiayue Cao, Kun-Han Lu, Matthew P Ward, Robert J Phillips, Steven Oleson, Terry L Powley & Zhongming Liu
Vagus nerve stimulation promotes gastric emptying by increasing pyloric opening measured with magnetic resonance imaging.

TRAP-SEQ (Translating Ribosome Affinity Purification followed by RNA sequencing) of interscapular brown adipose tissue (iBAT)- related ganglia from 7-day cold and warm treated mice

Heike Muenzberg, Michael Salbaum, Hans-Rudolf Berthoud, Sangho Yu, rui zhang, Clara Huesing, Nathan Lee, Richard Carmouche, Sara Webb & Susan Newman
Genetically-based neuro-modulation of adipose tissue functions

A multi-scale model of cardiac electrophysiology

Colleen Clancy & Pei-Chi Yang
A multi-scale model of cardiac electrophysiology

Quantified Morphology of the Human Vagus Nerve with Anti-Claudin-1

Nicole A. Pelot, J. Ashley Ezzell, Gabriel B. Goldhagen, Jake E. Cariello, Kara A. Clissold & Warren M. Grill
Immunohistochemistry micrographs of human vagus nerves labeled with anti-claudin-1. Binary traces from segmentation to quantify effective nerve diameter, effective fascicle diameter, number of fascicles, and perineurium thickness.

Quantified Morphology of the Human Vagus Nerve with Anti-Claudin-1

Nicole A. Pelot, J. Ashley Ezzell, Gabriel B. Goldhagen, Jake E. Cariello, Kara A. Clissold & Warren M. Grill
Immunohistochemistry micrographs of human vagus nerves labeled with anti-claudin-1. Binary traces from segmentation to quantify effective nerve diameter, effective fascicle diameter, number of fascicles, and perineurium thickness.

Scientific Articles

Joost B Wagenaar & Leonardo A Guercio
Blackfynn can use this dataset to organize and archive interesting scientific articles that are of interest to the company...

Spatial mapping and contextualization of axon subtypes innervating the long bones of C3H and B6 mice

Madelyn Lorenz, Jennifer M Brazill, Alec Beeve, Ivana Shen & Erica L Scheller
A dataset containing high-resolution confocal images of tranverse cross-sections of the C57BL/6J and C3H/HeJ femur and tibia that have been stained with anti-CGRP (sensory nerve), anti-TH (sympathetic nerve), anti-perilipin (adipocytes), and dapi (nuclei)

LLC and MM DiFC CTC detections 2020_11_04

Amber Williams
Processed diffuse in vivo flow cytometry (DiFC) data for mice with Lewis lung carcinoma (LLC) and multiple myeloma (MM) tumors used to study short term circulating tumor cell (CTC) dynamics.

Expression of molecular markers in subpopulations of mouse superior cervical ganglion neurons

Seoeun Lee, Alexandre J Lafond & Lori Zeltser
Expression of molecular markers in subpopulations of mouse superior cervical ganglion neurons using small molecule FISH (RNAScope)

Generic human lung scaffold

Arti Sukasem, Richard Christie & Peter Hunter
Annotated lung scaffold for human available for registration of segmented neural anatomical-functional mapping of pulmonary neural circuits.

In vivo visualization of pig vagus nerve 'vagotopy' using ultrasound

Kip A Ludwig, Megan L Settell, Aaron C Skubal, Rex C Chen, Maïsha Kasole, Bruce E Knudsen, Evan N Nicolai, James K Trevathan, Aniruddha Upadhye, Andrew J Shoffstall, Justin C Williams, Aaron Suminski, Warren M Grill & Nicole A Pelot
Ultrasound images of the vagus nerve from within the surgical pocket in a pig model to visualize the bimodal organization, or 'vagotopy'.

Chemogenetic whole-body and iBAT (interscapular brown adipose tissue) -specific sympathetic stimulation in anesthetized mice

Heike Muenzberg, Clara Huesing & Nathan Lee
Genetically-based neuro-modulation of adipose tissue functions

Quantified Morphology of the Pig Vagus Nerve

Nicole A. Pelot, Gabriel B. Goldhagen, Jake E. Cariello & Warren M. Grill
Binary traces from segmentation of cross sections of cervical and subdiaphragmatic pig vagus nerves stained with Masson's trichrome. Quantified effective nerve diameter, effective fascicle diameter, and number of fascicles.

Human Islet Microvasculature Analysis

Martha Campbell-Thompson, Elizabeth Butterworth, Katelyn Carty, Lith Nasif & Jesus Peñaloza
Human pancreas cleared with passive CLARITY, immunostained, and imaged on a Zeiss 710 microscope. Image analysis of islet and islet collagen IV volumes were determined using Vesselucida360.

Generic mouse lung scaffold

Arti Sukasem, Zohreh Ekhlasi, Richard Christie & Peter Hunter
Annotated lung scaffold for mouse available for registration of segmented neural anatomical-functional mapping of pulmonary neural circuits.

Registration Year

  • 2022
    168
  • 2021
    137
  • 2020
    86
  • 2019
    111

Resource Types

  • Dataset
    502