40 Works

Simulations of quasi-static foam flow through a diverging-converging channel

Simon Cox
Simulations were conducted in Surface Evolver, Version 2.71c. See http://facstaff.susqu.edu/brakke/evolver/evolver.html. We saved a dump file at each time step and from this extracted the information given below. For each of the two simulations (monodisperse, polydisperse) there are four files containing information required to reconstruct the fields of stress, texture, topological changes, and velocity. To generate the figures in the paper we analysed this data using bespoke C programs and plotted the result using gnuplot, Version...

Lolium perenne BAC-based physical maps co-ordinates (Supplementary Table 4)

Ian Armstead
Clone co-ordinates of BAC-based physical maps assembled using FPC and LTC softwares from HICF data generated from Lolium perenne BAC libraries derived from genotype p226/135/16.

Analysis of wheat grain traits using X-ray micro computed tomography

Nathan Hughes
This dataset is from an experiment ran at the National Plant Phenomics Centre, Wales. Using a new and novel CT analysis method which can be found at https://github.com/NPPC-UK/microCT_grain_analyser

HIV Prevalence and Armed Conflict Dataset v.2

Marie Louise Woodling & Colin McInnes
This Excel dataset was constructed by merging the UCDP/PRIO Armed Conflict dataset (v.4-2010) and data from UNAIDS which was prepared for the 2010 Report on the Global AIDS Epidemic, which details HIV prevalence between 1990-2009. Where the HIV prevalence of a country is shaded in yellow, the occurrence of conflict is indicated in the respective year.It is intended to give a straightforward and immediate impression of HIV prevalence rates during/ after conflict, thus providing scope...

HIV Prevalence and Armed Conflict BY INTENSITY Dataset v.2

Marie Louise Woodling & Colin McInnes
This Excel dataset complements the 'HIV Prevalence and Armed Conflict Dataset v.2'. In a similar vein, it also merges data on conflict from the UCDP/PRIO Armed Conflict dataset (v.4-2010) and data from UNAIDS which was prepared for the 2010 Report on the Global AIDS Epidemic, which details HIV prevalence between 1990-2009. However it differs from the aforementioned database by additionally indicating the INTENSITY of conflict in a given country. A key to understanding the dataset...

µCT imaging raw data and data analysis of small grain cereals and their wild relatives

Candida Nobre Nibau & Nathan Hughes
micro CT raw data files (pre-processed tiffs) and image analysis files of grain and spike morphological traits (.csv).

Microbial genome sequences and taxonomic information based on the Genometa 2012 data set

Martin Swain
These files provide the NCBI taxonomic data for a cleaned up subset of fasta sequences from the Genometa paper by Davenport et al (PloS one 7.8 (2012): e41224 DOI: 10.1371/journal.pone.0041224). The text file "gi-taxonomy-maps.clean.txt" can be readily parsed, allowing the GI numbers in the fasta headers from Genometa to be mapped onto NCBI taxonomic information. This allows the species, genus etc of the genome sequences to be retrieved. There are also two fasta files based...

Peniarth 44 + Llanstephan 1, tt. 102-45

G. R. Isaac & Simon Rodway

Data for: Aquaculture populations of a non-native marine tunicate exhibit higher genetic diversity and more invasive traits than marina populations

Melanie Prentice
Dataset of 7 microsatellite loci used to genotype 7 populations of the invasive marine tunicate, D. vexillum, in Britain and Ireland.

The World Hobbit Project Database

Martin Barker
The World Hobbit Project (2013-4) was a major collaborative effort involving researchers in 46 countries, designed to gather audience responses to Peter Jackson’s film trilogy of JRR Tolkien’s book from across the world. Enabled by a small grant from the British Academy (to whom we acknowledge our thanks), the project garnered responses to an online questionnaire which was designed using the same basic ‘qualiquant’ methodology as the earlier Lord of the Rings international project. A...

Supporting Information for Evaluation of a Permutation-Based Evolutionary Framework for Lyndon Factorizations - Data

James Andrew Major
Evaluation of a Permutation-Based Evolutionary Framework for Lyndon Factorizations DOI This is the code repository for the paper (https://doi.org/10.1007/978-3-030-58112-1_27). We use data from NCBI RefSeq (see prokaryotes.csv) in amino acid format. From the NCBI genome list, FTP URLs are shown to download the files. The amino acid format files end in "_protein.faa.gz". Data is available at http://hdl.handle.net/2160/b51cb7f3-63b3-4634-8b45-a8dc458444b4. The list of genomes we used for the testing of the minimisation of the number of Lyndon factors...

Evolutionary genomics of anthroponosis in Cryptosporidium

Martin Swain, Justin Alexander Pachebat, Guy Robinson & Rachel M Chalmers
Genomes of cryptosporidium species used in the linked paper but embargoed on NCBI. Note that other genomes are already available via NCBI.

Peniarth 30 (Llyfr Colan)

G. R. Isaac, Simon Rodway & Sarah Rowles

Supporting information for \"Flexible genes establish widespread bacteriophage pan-genomes in cryoconite hole ecosystems\"

Christopher M. Bellas, Declan C. Schroeder, Arwyn Edwards, Gary L. Barker & Alexandre Magno Anesio
Bacteriophage genomes rapidly evolve via mutation and horizontal gene transfer to counter evolving bacterial host defenses; such arms race dynamics should lead to divergence between phages from similar, geographically isolated ecosystems. However, near-identical phage genomes can reoccur over large geographical distances and several years apart, conversely suggesting many are stably maintained. Here, we show that phages with near-identical core genomes in distant, discrete aquatic ecosystems maintain diversity by possession of numerous flexible gene modules, where...

Do educational digital films enhance patient COPD outcomes?

Liam Knox
Chronic Obstructive Pulmonary Disease (COPD) refers to a group of lung conditions characterized by airways inflammation, small airways obstruction and progressive loss of lung function. There are 900,000 people diagnosed with COPD in England and Wales but allowing for under-diagnosis, the true prevalence could be 1.5 million. Sufferers are extensive health care users; where COPD is the second most common cause of emergency hospital admission in the UK with direct NHS costs over £800 million...

3D Model of a hand specimen of the Rasthof Formation bearing lonestones and granule clusters

Daniel Paul Le Heron, Marie Busfield & Christoph Kettler
As supplementary material, we present a 3 D model of a hand specimen of the Rasthof Formation in .fbx format. It can be viewed in the free Windows 3D Viewer app, and imported to various other software platforms e.g. Agisoft Metashape. The model was constructed from 119 photos taken by Christoph Kettler in May 2020. The photographs were aligned, a dense point cloud generated, textured, and a 3 D model created following the standard photogrammetry...

Supporting information for \"Stability of a Twisted Plateau Border with Line Tension and Bending Stiffness\"

Simon Cox
Surface evolver file: twister.fe Data from SE: For each set of simulated data on each of figures 4 to 6, there is a separate file, with file name containing by the figure number, the value of $T$ and the value of $B$. Each line is a critical value of the PB length $\ell$ and/or the twist angle $\theta$. This is the last line of data from a sequence of increasing $\ell$ or $\theta$, just before...

A viscous froth model adapted to wet foams

Denny Vitasari & Simon Cox
This dataset comprises the data from which we drew our conclusions concerning our extension of a “viscous froth” model to the dynamics of a wet foam in a Hele–Shaw cell. "lens_pb.fe" is a Surface Evolver input file from which all results are derived. We also provide the raw data (text files with extension .dat) which was generated from the Surface Evolver simulation code with different sets of parameters. Each .dat file consists of comma-separated columns...

Rhyddiaith y 15fed Ganrif

Katherine Joan Himsworth, Silva Mikaela Nurmio, Richard Roberts, Sara Elin Roberts, Sarah Rowles, Paul Russell & Patrick Sims-Williams
Testunau o bymtheg llawysgrif o’r 15fed ganrif Bwriad y prosiect yw digido rhyddiaith Gymraeg o’r llawysgrifau rhwng cyfnod y prosiect Rhyddiaith Gymraeg 1300–1425 a chyfnod y prosiect Corpws Hanesyddol yr Iaith Gymraeg 1500-1850

Peniarth 14, tt. 79-90

G. R. Isaac & Simon Rodway

Peniarth 29 (Llyfr Du o’r Waun)

G. R. Isaac & Simon Rodway

Peniarth 01 (rhyddiaith Llyfr Du Caerfyrddin)

G. R. Isaac & Simon Rodway

Cotton Caligula A.iii

G. R. Isaac & Simon Rodway

Lolium perenne BAC-end sequences

Ian Armstead
BAC-end sequences for HindIII and BstY1 Lolium perenne (perennial ryegrass) BAC libraries developed from genotype p226/135/16

Rhododendron data on regeneration of communities in Snowdonia

Dylan Gwynn-Jones, Gruffydd Lloyd Jones, Anne Winters & John Scullion
Data to support publication, including community data, chemicals etc.

Registration Year

  • 2020
    9
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    15
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Resource Types

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    8
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Affiliations

  • Aberystwyth University
    1