1,303 Works

Updated data of Borrelia spirochetes in human vaginal and seminal secretions.

Marianne J. Middelveen, Jennie Burke, Eva Sapi, Cheryl Bandoski, Katherine R. Filush, , Agustin Franco, Arun Timmaraju, Hilary A. Schlinger, Peter J. Mayne & Raphael B. Stricker
The dataset contains data files 1, 2, 2a, 3, 3a, 4, 5, 5a, 6 and 7. Detailed legends for each files can be found in the text file provided.

New dataset for mRNA splicing mutations in genetic disease

Natasha G. Caminsky, & Peter K. Rogan
Dataset for mRNA splicing mutations in genetic disease. All data from the extensive review of the literature presented in the article are reported as Supplementary tables 1 through 10. The following data are provided: 1) articles referring to information theory as a tool for splice site mutation analysis; 2) complete list of reviewed variants; 3) indels, duplications and multinucleotide variants; 4) deleterious natural site variants; 5) splicing mutation calculator data; 6) Benign Natural Site Variants;...

Raw Data for Table 2

Claire A. Sand, Anna Starr, & Andrew D. Grant
Blood biochemistry in healthy and endotoxaemic TRPV4 WT and KO mice. Blood gas and biochemistry were measured from venous blood samples by iSTAT point-of-care analyser in either TRPV4 KO mice, or WT mice treated i.p. with vehicle (10% DMSO) or HC-067047 (HC) for 24 h, either under naïve or endotoxaemic (LPS 12.5 mg/kg, i.v., 24 h) conditions. Abbreviations: PCO2, partial pressure of CO2; TCO2, total carbon dioxide; PCV, packed cell volume; HC, HC-067047; KO, TRPV4...

Data for JMP analysis

, Solomon Worku &
The displayed data was used to study the effect of rice variety, proportions of rice and tef, the interaction effect of the main factors on bread quality and to generate the prediction equations using statistical software JMP 8, 2008 (by SAS Institute Inc., Cary, NC, USA).

Raw data for Neuron:ENC ratio (page 10)

Benjamin N. Rollo, , Johanna E. Simkin, Trevelyan R. Menheniott & Donald F. Newgreen
ENC cell:neuron ratio and aggregate size.

qPCR data for tests of expression in charr developing embryo heads.

Johannes Gudbrandsson, Ehsan Ahi, , Kalina Kapralova, Bjarni Kristjansson, Sophie Steinhaeuser, Valerie Maier, Isak Johannesson, , & Arnar Palsson
“Gene Type": Designates the reference and candidate genes. “Gene”: Name of the gene. “Morph”: Which charr type the sample came from. "Relative age": Developmental timepoint. "Biological replicate": The two or more biological replicates used. "cDNA No": Marks the cDNA isolation used. "Ct value": Estimate of gene expression. "Tissue": Indicates the material used.

Parameters and multiple testing corrected p-values for expression analysis

Johannes Gudbrandsson, Ehsan Ahi, , Kalina Kapralova, Bjarni Kristjansson, Sophie Steinhaeuser, Valerie Maier, Isak Johannesson, , & Arnar Palsson
The file is tab-delimited and the columns are; “Unigene.Description”: the annotation for that gene / paralog group. “NR.contigs”: number of contigs with this annotation. “logCPM”: count per million, log-scale. "logFC.morph": Mean fold change between the morphs, log-scale. "logFC.T163", "logFC.T200", "logFC.T433": Mean fold change for each timepoints compared to timepoint 141, log-scale. "FDR.morph": P-value for morph difference, mulitple testing corrected. "FDR.time": P-value for time differences, mulitple testing corrected. "Contigs": SalmonDB id for the contigs with the...

Raw intracranial data for recording day dpi0

, , , , , Anne E. Anderson, & Jesus M. Cortes
Four electrodes were implanted bilaterally in the motor cortex and hippocampus. Label electrodes were LC (left cortex), RC (right cortex), LH (left hippocampus) and RH (right hippocampus). These data corresponds to days post KA injection (dpi) equal to 0 (ie. the same day of the injection). There are a total number of 8 files (window1, window2,...,window8), each one corresponding to one independent time window (ie., a segment) of 1250 time points of interictal activity. Thus,...

Raw intracranial data for recording day dpi1

, , , , , Anne E. Anderson, & Jesus M. Cortes
As for file dpi0.xls but for dpi1.

Raw intracranial data for recording day dpi7

, , , , , Anne E. Anderson, & Jesus M. Cortes
As for file dpi0.xls but for dpi7.

Student Responses

Claire Hemingway, Catrina Adams & Molly Stuhlsatz
Anonymized, raw data of student responses to optional open-ended survey question administered online following secondary school students' participation in the online mentored inquiry experience.

Raw data for Figure 6.

Claire A. Sand, Anna Starr, & Andrew D. Grant
Oedema formation in TRPV4 WT and KO mice was measured by comparing wet and dry weights of various organs. WT mice treated i.p. with vehicle (10% DMSO) or HC-067047 (HC) for 24 h, either under naïve or endotoxaemic (LPS 12.5 mg/kg, i.v., 24 h) conditions.

Dataset for mRNA splicing mutations in genetic disease

Natasha Caminsky, & Peter K. Rogan
All data from the extensive review of the literature presented in the article are reported in tables. The following data are provided: articles referring to information theory as a tool for splice site mutation analysis; complete list of reviewed variants; indels, duplications and multinucleotide variants; deletrious natural site variants; branch point variants; type 1-2-3 cryptic splice site variants; validated variants; splicing mutation calculator data.

Data used for retrospective analysis of the effects of levosimendan for cardiogenic shock

, , , & Mustapha Ferjani
Data was collected at the ICU in the Military Hospital of Tunis between Jan 2004 and Dec 2009, and between Jan 2011 and Dec 2013. PAM: Mean Arterial Pressure (mm Hg); HR: Heart Rate (beat/min); POD: Right Atrial Pressure (mm Hg); IC: Cardiac Index (L/min/m2); PAPO: Pulmonary Wedge Pressure (mm Hg); RVS: Systemic Vascular Resistance (dyne/s/cm2); SVO2: Mixed Venous Oxygen Saturation (%); PAP: Pulmonary arterial systolic pressure (mm Hg); Mean Pulmonary Arterial Pressure (mm Hg);...

Detection of B. pseudomallei in Sputum using Selective Enrichment Broth and Ashdown’s Medium Compared to Standard Culture

, Joanne Letchford, , , James C. McLaughlin, Ellen Jo Baron &
Specimens (Column A) were inoculated into selective enrichment broth before sub-culture onto Ashdown’s medium (Column B). Colonies that grew were tested using the oxidase test (Column C); oxidase-positive colonies were tested using a monoclonal antibody-based latex agglutination test for B. pseudomallei (Column D). The final results of this testing method are given in Column E. All sputum specimens were also cultured onto sheep blood, chocolate, and MacConkey agars. The results of standard culture are given...

The reproductive effects of reduced pollen deposition via exclosures and hand pollination on the cushion plant Silene acaulis

Anya Reid, Robyn Hooper, Olivia Molenda & Christopher J. Lortie
Silene acaulis is an important alpine plant species commonly demonstrated to have positive impacts on other plants and insects. In this experiment, we covered sets of plants (gynodioecious species with hermaphrodite and female flowers) with mesh with hand pollination only to examine the relative importance of pollen load as a potential stressor in alpine ecosystems.

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Sean M. Courtney & Michael P. Massett
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LipA and LesA/B/C multiple sequence alignment and 4mUB assay data

Hossein Gouran, Sandeep Chakraborty, , Bjarni Asgeirsson &
This zip file contains: a multiple sequence alignment for LipA and LesA/B/C (ALN format), and a CSV, which contains raw values for 4-MUB assay presenting relative fluorescent units (RFU). EV, empty vector; PBS, phosphate buffered saline.

Experimental data showing the effect(s) of growth hormone receptor/ binding protein (Ghr/bp) gene disruption and/or caloric restriction on the various outcomes

, Jamal Saleh, , Jeremy Turner, John Kopchick, Romesh Khardori & Andrzej Bartke
Data showing the effects of either the senescence-retarding Ghr/bp mutation, the senescence-retarding 30% caloric restriction, or both factors on the following (groups of) traits: 1) body weight, 2) complete blood cell content, 3) food consumption, 4) ad libitum-fed glucose tolerance, 5) fasted glucose tolerance, 6) 0.75 U.S.P.U. insulin tolerance, 7) 0.3 U.S.P.U. insulin tolerance, 8) pyruvate conversion, 9) open-field activity, 10) open-field memory, 11) various characteristics peripheral to the indirect calorimetry and spontaneous activity chambers-based...

Raw data of Borrelia spirochetes in human vaginal and seminal secretions

Marianne J. Middelveen, Jennie Burke, Eva Sapi, Cheryl Bandoski, Katherine R. Filush, , Agustin Franco, Arun Timmaraju, Hilary A. Schlinger, Peter J. Mayne & Raphael B. Stricker
The dataset contains data files 1, 2, 3, 4, 5, 5a, 6 and 7. Detailed legends for each files can be found in the text file provided.

Data used for SCAPEL search methodology to identify plant alpha helical - antimicrobial peptides in the PDB database

Sandeep Chakraborty, My Phu, , Bjarni Asgeirsson &
list.plants.txt: list of PDB IDs resulting from querying the PDB database with the keyword ‘plant’. ALPHAHELICES.zip: DSSP analysis of proteins listed in list.plants.txt to identify alpha helices. RawDataHelix.txt: PAGAL analysis of alpha helices listed in ALPHAHELICES.zip. HTH: Set of all pairs of alpha helices connected with a short (

Descriptive statistics for validation of Drosophila melanogaster genome sequence data

Casey M. Bergman & Penelope R. Haddrill
The PercentMapped column is obtained from the output of samtools flagstat using BAM files of mapped reads generated by bowtie2. The WolbachiaDepth, WolbachiaBreadth and PredictedInfectionStatus columns are obtained from the output of bedtools genomecov using BAM files of mapped reads generated by bowtie2. The ExperimentalInfectionStatus column is obtained from the results of Verspoor and Haddrill (2011). All other columns are obtained from the output of fastQC on the raw, unmapped reads.

Complete data for neurochemical and behavioral assessment in a mouse model of creatine transporter deficiency.

Laura Baroncelli, Maria Grazia Alessandrì, Jonida Tola, Elena Putignano, Martina Migliore, Elena Amendola, Francesca Zonfrillo, Cornelius Gross, Vincenzo Leuzzi, Giovanni Cioni & Tommaso Pizzorusso
Detailed descriptions of each dataset can be found in the text file provided.

Experimental and theoretical calculations raw data

Ignacio Boron, Juan Pablo Bustamante, Kelly S Davidge, , Lesley AH Bowman, Mariana Tinajero-Trejo, Sebastián Carballal, Rafael Radi, Robert K Poole, , Dario A Estrin, Marcelo A Marti & Leonardo Boechi
Detailed legends describing the raw data can be found in the text file provided.

Demographic characteristics and responses of student respondents

, Arun K Dubey, , Burton L Herz & Brian W Little
Dataset 1: Demographic characteristics of student respondents The numbers in the SPSS file have been coded as per the information provided below. Semester of study: Premed semester 1, 2- Premed semester 2, 3- Premed semester 3, 4- Premed semester 4, 5- MD (undergraduate medical program) semester 1, 6- MD (undergraduate medical program) semester 2, 7- MD (undergraduate medical program) semester 3, 8 - MD (undergraduate medical program) semester 4, 9- MD (undergraduate medical program) semester...

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