8 Works

pycalphad 0.4.1

Richard Otis & Zi-Kui Liu
pycalphad is a free and open-source Python library for designing thermodynamic models, calculating phase diagrams and investigating phase equilibria using the CALPHAD method. It provides routines for reading thermodynamic database (TDB files) and solving the multi-component, multi-phase Gibbs energy minimization problem. The purpose of this project is to provide any interested people the ability to tinker with and improve the nuts and bolts of CALPHAD modeling without having to be a computer scientist or expert...

A FASTA file containing 44 SSU rRNA genes with length >300 base pairs, including 40 extracted from the 77 genomes from metagenomes

Lily Momper
A FASTA file containing 44 SSU rRNA genes with length >300 base pairs, including 40 extracted from the 77 genomes from metagenomes, plus 4 additional SSU rRNA genes identified in preliminary (i.e. non-reported) GFMs

R Script for Combining Datasets

Elizabeth Roberto & Meredith Reba
The file contains a sample R script which can be used to combine the three global, city-level population datasets.

Spectral models for low-luminosity active galactic nuclei in LINERs

Rodrigo Nemmen
Spectral energy distribution data from the paper Nemmen et al. 2014, "Spectral models for low-luminosity active galactic nuclei in LINERs%3A the role of advection-dominated accretion and jets", published in MNRAS. This dataset includes the observational data and model SEDs published in the paper.
For more info about the data, please open the README.md file included.
DOI for paper%3A 10.1093/mnras/stt2388
This notation applies to all files%3A
- Each filename begins with the name of the galaxy- `ad` in the...

Scaffold ID files

Lily Momper
IMG/M-relevant files needed to isolate scaffold sets for all 77 genomes from metagenomes

pycalphad 0.4.2

Richard Otis & Zi-Kui Liu
pycalphad is a free and open-source Python library for designing thermodynamic models, calculating phase diagrams and investigating phase equilibria using the CALPHAD method. It provides routines for reading thermodynamic database (TDB files) and solving the multi-component, multi-phase Gibbs energy minimization problem. The purpose of this project is to provide any interested people the ability to tinker with and improve the nuts and bolts of CALPHAD modeling without having to be a computer scientist or expert...

All fasta files for bacterial and archaeal genomes from metagenomes, SURF microbial ecology project.

Lily Momper
Sequence files for bacterial and archaeal genomes recovered from metagenomes at SURF, a deep terrestrial subsurface environment.

Registration Year

  • 2016
    8

Resource Types

  • Dataset
    3
  • Software
    3
  • Collection
    2