409 Works

Probability map of bundle lh_CMF-RMF_0 (atlas of superficial white matter fibre bundles, version 2018)

M. Guevara, C. Román, J. Houenou, D. Duclap, C. Poupon, J. F. Mangin & P. Guevara
This data contains the probability map of a short fibre bundle connecting the left hemisphere Caudal Middle Frontal and Rostral Middle Frontal regions of the Desikan-Killiany atlas, in the MNI ICBM152 reference brain. This bundle was identified using a hybrid approach, incorporating anatomical information (from cortical regions of interest) and fibre shape (fibre clustering), from the tractography datasets of 78 subjects in the Neurospin’s ARCHI database. The map shows the probability of finding a fibre...

Probability map of bundle lh_PrC-SM_0 (atlas of superficial white matter fibre bundles, version 2018)

M. Guevara, C. Román, J. Houenou, D. Duclap, C. Poupon, J. F. Mangin & P. Guevara
This data contains the probability map of a short fibre bundle connecting the left hemisphere Precentral and Supramarginal regions of the Desikan-Killiany atlas, in the MNI ICBM152 reference brain. This bundle was identified using a hybrid approach, incorporating anatomical information (from cortical regions of interest) and fibre shape (fibre clustering), from the tractography datasets of 78 subjects in the Neurospin’s ARCHI database. The map shows the probability of finding a fibre belonging to the bundle...

Probability map of bundle lh_PoC-PrC_3 (atlas of superficial white matter fibre bundles, version 2018)

M. Guevara, C. Román, J. Houenou, D. Duclap, C. Poupon, J. F. Mangin & P. Guevara
This data contains the probability map of a short fibre bundle connecting the left hemisphere Postcentral and Precentral regions of the Desikan-Killiany atlas, in the MNI ICBM152 reference brain. This bundle was identified using a hybrid approach, incorporating anatomical information (from cortical regions of interest) and fibre shape (fibre clustering), from the tractography datasets of 78 subjects in the Neurospin’s ARCHI database. The map shows the probability of finding a fibre belonging to the bundle...

Maximum probability map of superficial white matter fibre bundles (atlas of superficial white matter fibre bundles, version 2018)

M. Guevara, C. Román, J. Houenou, D. Duclap, C. Poupon, J. F. Mangin & P. Guevara
This data contains the maximum probability map of superficial white matter fibre bundles, in the MNI ICBM152 reference brain. These bundles were identified using a hybrid approach, incorporating anatomical information (from cortical regions of interest) and fibre shape (fibre clustering), from the tractography datasets of 78 subjects in the Neurospin’s ARCHI database. The maximum probability corresponds to the voxels with the highest number of putative fibres going through.

Probabilistic cytoarchitectonic map of Area 6d1 (PreCG) (v4.0)

B. Sigl, S. Caspers, S. Bludau, H. Mohlberg, S. B. Eickhoff & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of Area 6d1 (PreCG) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area hIP5 (IPS) (v7.0)

M. Richter, K. Amunts, H. Mohlberg, S. Bludau, S. B. Eickhoff, K. Zilles & S. Caspers
This dataset contains the distinct probabilistic cytoarchitectonic map of Area hIP5 (IPS) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the reference space, where each voxel...

Probabilistic cytoarchitectonic map of Area hPO1 (POS) (v7.0)

M. Richter, K. Amunts, H. Mohlberg, S. Bludau, S. B. Eickhoff, K. Zilles & S. Caspers
This dataset contains the distinct probabilistic cytoarchitectonic map of Area hPO1 (POS) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the reference space, where each voxel...

Anterograde visualization of projections from medial orbitofrontal cortex in rat (case: F29)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (42) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer biotinylated dextran amine (BDA) was injected into the medial orbitofrontal cortex (MOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the...

Anterograde visualization of projections from lateral and ventral orbitofrontal cortex in rat (case: F10)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (86) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. Two anterograde tracers, biotinylated dextran amine (BDA) and Phaseolus vulgaris-leucoagglutinin (PHA-L), were injected into the lateral (LOC) and ventral orbitofrontal cortex (VOC), respectively. Brain sections are 300 µm apart and 50 µm thick. The dataset contains two complete series throughout the anterior-posterior extent of the brain, contributing to visualization of...

Anterograde visualization of projections from ventral orbitofrontal cortex in rat (case: F6)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (45) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer biotinylated dextran amine (BDA) was injected into the ventral orbitofrontal cortex (VOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the...

Anterograde visualization of projections from medial orbitofrontal cortex in rat (case: F3)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (42) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer Phaseolus vulgaris-leucoagglutinin (PHA-L) was injected into the medial orbitofrontal cortex (MOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the brain,...

Anterograde visualization of projections from lateral orbitofrontal cortex in rat (case: F13)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (43) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer Phaseolus vulgaris-leucoagglutinin (PHA-L) was injected into the lateral orbitofrontal cortex (LOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the brain,...

Density measurements of different receptors for Area PGp (IPL) [human, v1.0]

K. Zilles, N. Palomero-Gallagher, K. Amunts & S. Caspers
This dataset contains the densities (in fmol/mg protein) of receptors for classical neurotransmitters in Area PGp (IPL) obtained by means of quantitative _in vitro_ autoradiography. The receptor densities are visualized as _fingerprints_ (**fp**), which provide the mean density and standard deviation for each of the analyzed receptor types, averaged across samples. Overview of available measurements [ **receptor** \| **_neurotransmitter_** \| _labeling agent_ ]: **AMPA** \| **_glutamate_** \| _[3H]AMPA_ **kainate** \| **_glutamate_** \| _[3H]kainate_ **NMDA** \|...

Efferents of the perirhinal cortex (PRH) in mice

U. Schlegel, Martha Hvoslef-Eide, Kristian Lensjø & Marianne Fyhn
This dataset contains confocal image data of coronal sections following anterograde tract tracer injections (AAV5-hSyn-hChR2(H134R)-EYFP) in the perirhinal cortex in five adult male C57BL/J6 mice. The images show connections from the perirhinal cortex to other areas in the mouse brain.

Modulation of hippocampal GABAergic currents by anti-gephyrin intrabodies (delta2-188)

R. Pizzarelli, D. Pimpinella, S. Marinelli & E. Cherubini
The efficiency of synaptic transmission relies on the temporally and spatially regulated expression of postsynaptic receptors localized in precise apposition to presynaptic release sites. At synapses, receptors are organized in clusters which are formed by highly regulated events, dynamically controlled by a number of proteins including scaffolds, adhesion molecules and active transport processes along the cytoskeleton (Kneussel and Loebrich, 2007). At inhibitory synapses, GABAergic signaling controls dendritic integration, neural excitability, circuit reorganization and fine tuning...

Modulation of cortical GABAergic currents by anti-gephyrin intrabodies (scFv-geph NLSC)

A. Morabito, M. Giustizieri, S. Marinelli, G. Meli, A. Cattaneo & E. Cherubini
The efficiency of synaptic transmission relies on the temporally and spatially regulated expression of postsynaptic receptors localized in precise apposition to presynaptic release sites. At synapses, receptors are organized in clusters which are formed by highly regulated events, dynamically controlled by a number of proteins including scaffolds, adhesion molecules and active transport processes along the cytoskeleton (Kneussel and Loebrich, 2007). At inhibitory synapses, GABAergic signaling controls dendritic integration, neural excitability, circuit reorganization and fine tuning...

Multi-area recordings from visual and somatosensory cortices, perirhinal cortex and hippocampal CA1

J. Bos, M. Vinck, L. Van Mourik-Donga, J. Jackson, M.P. Witter & C. Pennartz
The dataset includes spiking data from four areas (V2m, S1bf, perirhinal cortex, and hippocampal CA1) recorded simultaneously in freely moving rats during a spatial navigation task with visual discrimination and memory components. Position data of the animals during the task obtained from video tracking is also provided. A more detailed overview of the experimental design and data collection process can be found in [1].

Laminar recordings from V1 of monkeys performing a figure-ground segregation task

M. W. Self, T. Van Kerkoerle, H. Supèr & P. R. Roelfsema
This dataset contains electrophysiological data (Multi-unit activity and current-source density) from the different layers of V1 of macaque monkey during a figure-ground segregation task.

PCI-like measure in rodents

A. Arena, S. Thon & J. Storm
The aim of this task is to record evoked related potentials (ERPs) following a cortical perturbation, from a large number of cortical areas of rats exposed to general anaesthesia and during wakefulness. The recorded evoked cortical activity is used to quantify cortical complexity and to study its relation to (un)consciousness (Massimini et al. Science, 2005) in rodents. According to the Integrated Information Theory (IIT), any physical system generates consciousness as it is able to integrate...

Sagittal and horizontal section images showing neuronal nuclei, calbindin and parvalbumin staining in the rat hippocampal region

C. Boccara, L. Kjonigsen, I. Hammer, J.G. Bjaalie, T.B. Leergaard & M.P. Witter
Bright-field microscopy images of serial sagittal and horizontal (half hemisphere) brain sections showing neuronal nuclei (NeuN), calbindin and parvalbumin in an adult male Long Evans rat (case 902). The images show the detailed architecture of this complex region and enable identification of regional and subregional boundaries.

Probabilistic map of the direct segment of the right arcuate fasciculus (atlas of deep white matter fibre bundles, version 2018)

P. Guevara, D. Duclap, C. Poupon, L. Marrakchi-Kacem, P. Fillard, D. Le Bihan, M. Leboyer, J. Houenou & J. F. Mangin
This data contains the probability map of the direct segment of the right arcuate fasciculus (atlas of deep white matter fibre bundles, version 2018), in the MNI ICBM152 reference brain. This bundle was identified by fibre clustering, from the tractography datasets of 78 subjects in Neurospin’s ARCHI database. The map shows the probability of finding a fibre belonging to the bundle in each voxel of the reference brain. The maximum probability corresponds to the voxels...

Probabilistic map of the left fornix (atlas of deep white matter fibre bundles, version 2018)

P. Guevara, D. Duclap, C. Poupon, L. Marrakchi-Kacem, P. Fillard, D. Le Bihan, M. Leboyer, J. Houenou & J. F. Mangin
This data contains the probability map of the left fornix (atlas of deep white matter fibre bundles, version 2018), in the MNI ICBM152 reference brain. This bundle was identified by fibre clustering, from the tractography datasets of 78 subjects in Neurospin’s ARCHI database. The map shows the probability of finding a fibre belonging to the bundle in each voxel of the reference brain. The maximum probability corresponds to the voxels with the highest number of...

Maximum probability map of deep white matter fibre bundles (atlas of deep white matter fibre bundles, version 2018)

P. Guevara, D. Duclap, C. Poupon, L. Marrakchi-Kacem, P. Fillard, D. Le Bihan, M. Leboyer & J. F. Mangin
This data contains the maximum probability map of deep white matter fibre bundles (atlas of deep white matter fibre bundles, version 2018), in the MNI ICBM152 reference brain. These bundles were identified by fibre clustering, from the tractography datasets of 78 subjects in Neurospin’s ARCHI database. The maximum probability corresponds to the voxels with the highest number of putative fibres going through.

Probabilistic map of the anterior segment of the right arcuate fasciculus (atlas of deep white matter fibre bundles, version 2018)

P. Guevara, D. Duclap, C. Poupon, L. Marrakchi-Kacem, P. Fillard, D. Le Bihan, M. Leboyer, J. Houenou & J. F. Mangin
This data contains the probability map of the anterior segment of the right arcuate fasciculus (atlas of deep white matter fibre bundles, version 2018), in the MNI ICBM152 reference brain. This bundle was identified by fibre clustering, from the tractography datasets of 78 subjects in Neurospin’s ARCHI database. The map shows the probability of finding a fibre belonging to the bundle in each voxel of the reference brain. The maximum probability corresponds to the voxels...

Density measurements of different receptors for DG (Hippocampus) [human, v1.0]

N. Palomero-Gallagher & K. Zilles
This dataset contains the densities (in fmol/mg protein) of receptors for classical neurotransmitters in DG (Hippocampus) obtained by means of quantitative _in vitro_ autoradiography. The receptor densities are visualized as _fingerprints_ (**fp**), which provide the mean density and standard deviation for each of the analyzed receptor types, averaged across samples. Overview of available measurements [ **receptor** \| **_neurotransmitter_** \| _labeling agent_ ]: **AMPA** \| **_glutamate_** \| _[3H]AMPA_ **kainate** \| **_glutamate_** \| _[3H]kainate_ **NMDA** \| **_glutamate_**...

Registration Year

  • 2019
    409

Resource Types

  • Dataset
    409