940 Works

Maps of neurons stained with anti-Parvalbumin antibody

F. Pavone & I. Costantini
This dataset is about 3D-imaging at high resolution of parvalbumin expressing neurons of selected regions (area 17 of visual cortex) of human brain. The dataset contains the final fused volume in tiff format, the originally acquired 3D stacks, as well as stitching file generated by ZetaStitcher.

Probabilistic cytoarchitectonic map of Area TE 1.1 (HESCHL) (v5.0)

P. Morosan, J. Rademacher, A. Schleicher, K. Amunts, T. Schormann, C. Werner, H. Freund & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area TE 1.1 (HESCHL) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to...

Probabilistic cytoarchitectonic map of Area 7A (SPL) (v8.2)

F. Scheperjans, K. Hermann, S. B. Eickhoff, K. Amunts, A. Schleicher, L. Hoemke, H. Mohlberg & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area 7A (SPL) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area Fo2 (OFC) (v3.2)

A. Henssen, K. Zilles, N. Palomero-Gallagher, A. Schleicher, H. Mohlberg, F. Gerboga, S. B. Eickhoff, S. Bludau & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of Area Fo2 (OFC) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area 3a (PostCG) (v8.2)

S. Geyer, A. Schleicher, T. Schormann, H. Mohlberg & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area 3a (PostCG) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area 5L (SPL) (v8.2)

F. Scheperjans, K. Hermann, S. B. Eickhoff, K. Amunts, A. Schleicher, L. Hoemke, H. Mohlberg & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area 5L (SPL) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Ca2+/calmodulin-dependent protein kinase II tetracycline-transactivator expression: coronal sections (case 317.8)

F. Odeh, T.B. Leergaard, J. Boy, T. Schmidt, O. Riess & J.G. Bjaalie
Bright-field microscopy images of serial coronal brain sections showing Ca2+/calmodulin-dependent protein kinase II (Camk2a) promoter expression in a bigenic Camk2a-tetracycline-transactivator (tTA) mouse brain (case 317.8, adult female), using a driver-reporter construct in which the Camk2a-tTA promoter regulates the expression of the E. coli derived LacZ reporter gene encoding β-galactosidase, which is visualized histologically using X-gal (5-Bromo-4-chloro-3-indolyl β-d-galactopyranoside) as a substrate. Methodological details are provided in Odeh et al., Neuroimage 54:2603-11, 2011. Our data show that...

Probabilistic cytoarchitectonic map of Area 5M (SPL) (v8.2)

F. Scheperjans, K. Hermann, S. B. Eickhoff, K. Amunts, A. Schleicher, L. Hoemke, H. Mohlberg & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area 5M (SPL) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Ventral Dentate Nucleus (Cerebellum) (v6.0)

S. Tellmann, S. Bludau, S. B. Eickhoff, H. Mohlberg, M. Minnerop & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of Ventral Dentate Nucleus (Cerebellum) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to...

Probabilistic cytoarchitectonic map of Area OP3 (POperc) (v9.2)

S. B. Eickhoff, A. Schleicher, K. Amunts, H. Mohlberg & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area OP3 (POperc) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area s24 (sACC) (v16.0)

N. Palomero-Gallagher, S. B. Eickhoff, F. Hoffstaedter, A. Schleicher, H. Mohlberg, B. Vogt, K. Amunts & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area s24 (sACC) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Brain-wide distribution of vesicular glutamate transporter type 3 (VGLUT3)

M. Stensrud, F. Chaudhry, T.B. Leergaard, J.G. Bjaalie & V. Gundersen
Vesicular glutamate transporters (VGLUT1-3) carry glutamate into synaptic vesicles. This dataset is a brain-wide collection of microscopic images showing the distribution of vesicular glutamate transporter 3 (VGLUT3) in the normal rodent brain, visualized by for light microscopy using immunohistochemistry using an antibody against VGLUT3.

Probabilistic cytoarchitectonic map of Area Ig2 (Insula) (v11.0)

F. Kurth, S. B. Eickhoff, A. Schleicher, L. Hoemke, K. Zilles & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of Area Ig2 (Insula) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area FG3 (FusG) (v6.0)

S. Lorenz, K. Weiner, J. Caspers, H. Mohlberg, A. Schleicher, S. Bludau, S. B. Eickhoff, K. Grill-Spector, K. Zilles & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of Area FG3 (FusG) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of Area hOc4la (LOC) (v3.2)

A. Malikovic, K. Amunts, A. Schleicher, H. Mohlberg, M. Kujovic, N. Palomero-Gallagher, S. B. Eickhoff & K. Zilles
This dataset contains the distinct probabilistic cytoarchitectonic map of Area hOc4la (LOC) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the...

Probabilistic cytoarchitectonic map of LB (Amygdala) (v6.1)

O. Kedo, K. Zilles, N. Palomero-Gallagher, S. Bludau & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of LB (Amygdala) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the reference...

sIPSCs from juvenile (P21-30) C57Bl6/J male mice from CA1 pyramidal neurons receiving input from PV+ interneurons

E. Cherubini, C. Marchetti & S. Marinelli
A general procedure to fit individual synaptic events recorded from voltage clamp experiments was tested with various sets of experimental data on GABAergic synapses; gephyrin and gephyrin-dependent pathways were chosen as a suitable example of a kinetic model of synaptic transmission. The data used here are obtained from coronal hippocampal slices (300 μm thick) from juvenile (P21-30) C57B16/J male mice receiving input from parvalbumin positive (PV+) interneurons. The dataset contains 614 individual events recorded from...

Probabilistic cytoarchitectonic map of CM (Amygdala) (v6.1)

O. Kedo, K. Zilles, N. Palomero-Gallagher, S. Bludau & K. Amunts
This dataset contains the distinct probabilistic cytoarchitectonic map of CM (Amygdala) in the individual, single subject template of the MNI Colin 27 reference space. As part of the Julich-Brain cytoarchitectonic atlas, the area was identified using classical histological criteria and quantitative cytoarchitectonic analysis on cell-body-stained histological sections of 10 human postmortem brains obtained from the body donor program of the University of Düsseldorf. The results of the cytoarchitectonic analysis were then mapped to the reference...

Hippocampal image volume derived from Thy1-GFP-M transgenic mouse

F. Pavone & L. Silvestri
Reconstruction of the hippocampus of a Thy1-GFP-M transgenic mouse, where a subset of pyramidal neurons and of interneurons are labeled. Data obtained with serial two-photon tomography.

Purkinje cell distribution in mouse cerebellum

F. Pavone & L. Silvestri
The dataset contains the complete reconstruction of the cerebellum from an L7-GFP mouse (PND 10), where all Purkinje cells are fluorescently labeled. The dataset includes raw imaging data obtained with confocal light sheet microscopy of cleared sample and cell localization (position of somata expressed as xyz coordinates).

Neuronal density in the human cerebral cortex

M. Inda, J. DeFelipe & A. Muñoz
This dataset contains the neuronal density in various cytoarchitectonic areas of the human cerebral cortex. Cell density was analyzed on cell-body-stained histological sections of 5 human postmortem brains that were supplied by Dr R. Alcaraz, Forensic Pathology Service, Basque Institute of Legal Medicine, Bilbao, Spain. Brain samples were obtained following the guidelines and approval by the Institutional Ethical Committee.

Axonal projections from the forelimb representation of the rat primary somatosensory cortex (case R605)

I. Zakiewicz, Y. Van Dongen, T.B. Leergaard & J.G. Bjaalie
Bright-field microscopy images of serial coronal brain sections showing anterogradely labeled axons in an adult male Sprague Dawley rat following injection of Phaseolus vulgaris leucoagglutinin in the forelimb representation of the primary somatosensory cortex. The labeling was visualized histologically in sections counterstained to visualize cytoarchitecture. The presence of cytochrome oxidase positive barrels has been visualized in selected sections through the sensorimotor cortex.

Anterograde visualization of projections from lateral orbitofrontal cortex in rat (case: F36)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (42) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer biotinylated dextran amine (BDA) was injected into the lateral orbitofrontal cortex (LOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the...

Anterograde visualization of projections from lateral orbitofrontal cortex in rat (case: F35)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (43) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer biotinylated dextran amine (BDA) was injected into the lateral orbitofrontal cortex (LOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the...

Anterograde visualization of projections from ventral orbitofrontal cortex in rat (case: F34)

H. Kondo, G.M. Olsen, M. Gianatti, B. Monterotti, T. Sakshaug & M.P. Witter
High-resolution bright-field microscopy images (44) of serial coronal brain sections showing anterogradely labeled axons in orbitofrontal cortex (OFC) in a female adult Sprague Dawley rat. The anterograde tracer biotinylated dextran amine (BDA) was injected into the ventral orbitofrontal cortex (VOC). Brain sections are 300 µm apart and 50 µm thick. The dataset contains a complete series throughout the anterior-posterior extent of the brain, contributing to visualization of a topographically organized connectivity from OFC throughout the...

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