86 Works

Habitat Use of Spring Migrating Dabbling Ducks in the Wabash River Valley

Benjamin R. Williams & Thomas J. Benson
This data describes habitat use, availability, landscape level influences, and daily movement of dabbling ducks in the Wabash River Valley of southeastern Illinois and southwestern Indiana. It contains triangulated locations of individual ducks, associated habitat assignments of those locations, flood survey data to determine water availability, and randomly generated points to assess landscape level questions.

Data from: Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss

Brandon Legried, Erin K. Molloy, Tandy Warnow & Sebastien Roch
This repository includes scripts and datasets for the paper, "Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss."

VCF files used for VEF: a Variant Filtering tool based on Ensemble methods

Chuanyi Zhang & Idoia Ochoa
VCF files used to analyze a novel filtering tool VEF, presented in the article "VEF: a Variant Filtering tool based on Ensemble methods".

Experiments on patterns of alluvial cover and bedrock erosion in a meandering channel

Roberto Fernández, Gary Parker & Colin Stark
This dataset includes measurements taken during the experiments on patterns of alluvial cover over bedrock. The dataset includes an hour worth of timelapse images taken every 10s for eight different experimental conditions. It also includes the instantaneous water surface elevations measured with eTapes at a frequency of 10Hz for each experiment. The 'Read me Data.txt' file explains in more detail the contents of the dataset.

Flight Ability of Juvenile Songbirds at Fledgling: Examples of Fledgling Drop Tests

Todd M. Jones, Thomas J. Benson & Michael P. Ward
This data publication provides example video clips related to research on association among flight ability of juvenile songbirds at fledging and juvenile morphological traits (wing emergence, wing length, body condition, mass, and tarsus length. File names reflect the species dropped in each video. These videos are supplemental material for scientific publications by the authors and reflect an example subset of all videos collected form 2017-2018 as part of a larger study on the post-fledging ecology...

Data for: Probabilistic global maps of crop-specific areas from 1961 to 2014

Nicole Jackson, Megan Konar, Peter Debaere & Lyndon Estes
Agriculture has substantial socioeconomic and environmental impacts that vary between crops. However, information on how the spatial distribution of specific crops has changed over time across the globe is relatively sparse. We introduce the Probabilistic Cropland Allocation Model (PCAM), a novel algorithm to estimate where specific crops have likely been grown over time. Specifically, PCAM downscales annual and national-scale data on the crop-specific area harvested of 17 major crops to a global 0.5-degree grid from...

Data from TRACTION: Fast non-parametric improvement of estimated gene trees

Sarah Christensen, Erin K. Molloy, Pranjal Vachaspati & Tandy Warnow
Datasets used in the study, "TRACTION: Fast non-parametric improvement of estimated gene trees," accepted at the Workshop on Algorithms in Bioinformatics (WABI) 2019.

Data for: Dynamic controls on field-scale soil nitrous oxide hot spots and hot moments across a microtopographic gradient

Alexander Krichels
This dataset includes all data presented in the manuscript entitled: "Dynamic controls on field-scale soil nitrous oxide hot spots and hot moments across a microtopographic gradient"

RCT Tagger Results

Yogeshwar Kansara & Linh Hoang
The data file contains a list of articles and their RCT Tagger prediction scores, which were used in a project associated with the manuscript "An in-situ evaluation of the RCT Tagger using 7413 articles included in 570 Cochrane reviews with RCT-only inclusion criteria".

Articles With PubMed Identifiers

Yogeshwar Kansara & Linh Hoang
The data file contains a list of articles that have PubMed identifiers, which were used in a project associated with the manuscript "An in-situ evaluation of the RCT Tagger using 7413 articles included in 570 Cochrane reviews with RCT-only inclusion criteria".

Sampled Cochrane Reviews Included RCTs Only

Yogeshwar Kansara, Linh Hoang, Xiaoru Dong & Jingyi Xie
The data file contains detailed information of the Cochrane reviews that were used in a project associated with the manuscript (working title) "An in-situ evaluation of the RCT Tagger using 7413 articles included in 570 Cochrane reviews with RCT-only inclusion criteria".

Error Analysis

Yogeshwar Kansara, Linh Hoang & Jodi Schneider
The data file contains a list of articles given low score by the RCT Tagger and an error analysis of them, which were used in a project associated with the manuscript "An in-situ evaluation of the RCT Tagger using 7413 articles included in 570 Cochrane reviews with RCT-only inclusion criteria".

Data from: Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge

Erin K. Molloy & Tandy Warnow
This repository includes scripts and datasets for the paper, "Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge." All data files in this repository are for analyses using the logdet distance matrix computed on the concatenated alignment. Data files for analyses using the average gene-tree internode distance matrix can be downloaded from the Illinois Data Bank (https://doi.org/10.13012/B2IDB-1424746_V1). The latest version of NJMerge can be downloaded from Github (https://github.com/ekmolloy/njmerge).
List of Changes: • Updated timings for...

Expanded Morality Lexicon

Rezvaneh Rezapour & Jana Diesner
This lexicon is the expanded/enhanced version of the Moral Foundation Dictionary created by Graham and colleagues (Graham et al., 2013). Our Enhanced Morality Lexicon (EML) contains a list of 4,636 morality related words. This lexicon was used in the following paper - please cite this paper if you use this resource in your work. Rezapour, R., Shah, S., & Diesner, J. (2019). Enhancing the measurement of social effects by capturing morality. Proceedings of the 10th...

Trophic cascade strength is influenced by size frequency distribution of primary consumers and size-selective predation: examined with mesocosms and modeling

Thomas Detmer & David Wahl
Data set of trophic cascade in mesocosms experiments for zooplankton (biomass and body size) and phytoplankton (chlorophyll a concentration) caused by Bluegill as well as zooplankton production in those same treatment groups. Zooplankton were collected by tube sampler and phytoplankton were collected through grab samples.

Data for: Vertebrate scavenger guild composition and utilization of carrion in an East Asian temperate forest

Maximilian Allen
This is the data set from the published manuscript 'Vertebrate scavenger guild composition and utilization of carrion in an East Asian temperate forest' by Inagaki et al.

Cline Center Historical Phoenix Event Data. Cline Center for Advanced Social Research. v1.2.0. December 10

Scott Althaus, Joseph Bajjalieh, John Carter, Buddy Peyton & Dan Shalmon
The Cline Center Historical Phoenix Event Data covers the period 1945-2019 and includes several million events extracted from 18.9 million news stories. This data was produced using the state-of-the-art PETRARCH-2 software to analyze content from the New York Times (1945-2018), the BBC Monitoring's Summary of World Broadcasts (1979-2019) and the Central Intelligence Agency’s Foreign Broadcast Information Service (1995-2004). It documents the agents, locations, and issues at stake in a wide variety of conflict, cooperation and...

TREC document topic annotations

Garrick Sherman
Human annotations of randomly selected judged documents from the AP 88-89, Robust 2004, WT10g, and GOV2 TREC collections. Seven annotators were asked to read documents in their entirety and then select up to ten terms they felt best represented the main topic(s) of the document. Terms were chosen from among a set sampled from the document in question and from related documents.

Hoover et al AUK-19-093 Illinois Data Bank Local conspecific density does not influence reproductive output in a secondary cavity-nesting songbird

Jeffrey P Hoover, Nicole M Davros, Wendy Schelsky & Jeffry D Brawn
Dataset associated with Hoover et al AUK-19-093 submission: Local conspecific density does not influence reproductive output in a secondary cavity-nesting songbird. Excel CSV with all of the data used in analyses. Description of variables YEARS: year ORDINAL_DATE: number for what day of the year it is with 1 January = 1,……30 December = 365 SITE: acronym for each study site BOX: unique nest box identifier on each study site TREAT: designates whether nest box was...

Automated Isotope Identification and Quantification Using Artificial Neural Networks

Mark Kamuda & Kathryn Huff
This dataset contains gamma-ray spectra templates for a source interdiction and uranium enrichment measurement task. This dataset also contains Keras machine learning models trained using datasets created using these templates.

[Redacted]

Removed by Illinois Data Bank curators. Contact us for more information. https://databank.illinois.edu/help#contact

Data for: Lipid heterogeneity between astrocytes and neurons revealed with single cell MALDI MS supervised by immunocytochemical classification

Elizabeth Neumann, Troy Comi, Stanislav Rubakhin & Jonathan Sweedler
We have recently created an approach for high throughput single cell measurements using matrix assisted laser desorption / ionization mass spectrometry (MALDI MS) (J Am Soc Mass Spectrom. 2017, 28, 1919-1928. doi: 10.1007/s13361-017-1704-1. Chemphyschem. 2018, 19, 1180-1191. doi: 10.1002/cphc.201701364). While chemical detail is obtained on individual cells, it has not been possible to correlate the chemical information with canonical cell types. Now we combine high-throughput single cell mass spectrometry with immunocytochemistry to determine lipid profiles...

Manipulating social information to promote frugivory by birds on a Hawaiian Island

Sean MacDonald, Michael Ward & Jinelle Sperry

Data for Phylogenomics of Auchenorrhyncha (Insecta: Hemiptera) using Transcriptomes: Examining Controversial Relationships via Degeneracy Coding and Interrogation of Gene Conflict

Rachel Skinner, Christopher Dietrich, Kimberly Walden, Eric Gordon, Andrew Sweet, Lars Podsiadlowski, Malte Petersen, Chris Simon, Daniela Takiya & Kevin Johnson
The data in this directory corresponds to: Skinner, R.K., Dietrich, C.H., Walden, K.K.O., Gordon, E., Sweet, A.D., Podsiadlowski, L., Petersen, M., Simon, C., Takiya, D.M., and Johnson, K.P. Phylogenomics of Auchenorrhyncha (Insecta: Hemiptera) using Transcriptomes: Examining Controversial Relationships via Degeneracy Coding and Interrogation of Gene Conflict. Systematic Entomology. Correspondance should be directed to: Rachel K. Skinner, rskinn2@illinois.edu If you use these data, please cite our paper in Systematic Entomology. The following files can be found...

Avian fitness consequences and habitat selection

Bryan Reiley
Nest survival and Fledgling production data for Bell's Vireo and Willow Flycatcher nests.

Registration Year

  • 2019
    86

Resource Types

  • Dataset
    85

Affiliations

  • University of Illinois
    47