617 Works

RaDICaL: A Synchronized FMCW Radar, Depth, IMU and RGB Camera Data Dataset with Low-Level FMCW Radar Signals (ROS bag format)

Teck Yian Lim, Spencer Abraham Markowitz & Minh Do
This dataset consists of raw ADC readings from a 3 transmitter 4 receiver 77GHz FMCW radar, together with synchronized RGB camera and depth (active stereo) measurements. The data is grouped into 4 distinct radar configurations: - "indoor" configuration with range <14m - "30m" with range <38m - "50m" with range <63m - "high_res" with doppler resolution of 0.043m/s # Related code https://github.com/moodoki/radical_sdk # Hardware Project Page https://publish.illinois.edu/radicaldata

Datasets used in \"Recursive MAGUS: scalable and accurate multiple sequence alignment\"

Vladimir Smirnov
This archive contains the datasets used in the paper "Recursive MAGUS: scalable and accurate multiple sequence alignment". - 16S.3, 16S.T, 16S.B.ALL - HomFam - RNASim These can also be found at https://sites.google.com/eng.ucsd.edu/datasets/alignment/pastaupp

Multi-scale CyberGIS Analytics for Detecting Spatiotemporal Patterns of COVID-19

Fangzheng Lyu, Jeon-Young Kang, Shaohua Wang, Su Han, Zhiyu Li, Shaowen Wang & Anand Padmanabhan
This dataset contains all the code, notebooks, datasets used in the study conducted for the research publication titled "Multi-scale CyberGIS Analytics for Detecting Spatiotemporal Patterns of COVID-19 Data". Specifically, this package include the artifacts used to conduct spatial-temporal analysis with space time kernel density estimation (STKDE) using COVID-19 data, which should help readers to reproduce some of the analysis and learn about the methods that were conducted in the associated book chapter. ## What’s inside...

Trelease and Brownfields Woods tree decay dataset

Sierra Perez, James Dalling & Jennifer Fraterrigo
Information on the location, dimensions, time of treefall or death, decay state, wood nutrient, wood pH and wood density data, and soil moisture, slope, distance from forest edge and soil nutrient data associated with the publication "Interspecific wood trait variation predicts decreased carbon residence time in changing forests" authored by Sierra Perez, Jennifer Fraterrigo, and James Dalling. ** Note: Blank cells indicate that no data were collected.

Multi-State Survey of State Opportunity Zones Laws (Last Updated Jan. 14, 2022)

Michelle Layser
This dataset provides a 50-state (and DC) survey of state-level Opportunity Zones laws, including summaries of states' Opportunity Zone tax preferences, supplemental tax preferences, and approach to Opportunity Zones conformity. Data was last updated on January 14, 2022.

mspack-data

Hanau Felix, Rost Hannes & Idoia Ochoa
This data set contains mass spectrometry data used for the publication "mspack: efficient lossless and lossy mass spectrometry data compression".

Data from: Accurate Large-scale Phylogeny-Aware Alignment using BAli-Phy

Maya Gupta, Paul Zaharias & Tandy Warnow
This repository includes scripts and datasets for the paper, "Accurate Large-scale Phylogeny-Aware Alignment using BAli-Phy" submitted to Bioinformatics.

Dataset for \"Safety and data quality of EEG recorded simultaneously with multi-band fMRI\"

Maximillian Egan, Ryan Larsen & Sepideh Sadaghiani
This dataset contains EEG and Temperature data acquired from inside the bore of an MRI scanner during scanning with two different types of fMRI sequences: single-band and and multi-band. The EEG data were acquired from the heads of adult humans undergoing scanning, and can be used to assess differences in EEG data quality due to sequence type. The temperature data were acquired from a watermelon phantom and can be used to assess heating differences due...

Data for Conservation Tillage Mitigates Drought Induced Soybean Yield Losses in the US Corn Belt

Bowen Chen, Benjamin Gramig & Seong Yun
Data files and R code to replicate the econometric analysis in the journal article: B Chen, BM Gramig and SD Yun. “Conservation Tillage Mitigates Drought Induced Soybean Yield Losses in the US Corn Belt.” Q Open. https://doi.org/10.1093/qopen/qoab007

StyleGAN2 trained on MR brain and face images: network weights

Varun A. Kelkar & Mark A. Anastasio
This repository contains the weights for two StyleGAN2 networks trained on two composite T1 and T2 weighted open-source brain MR image datasets, and one StyleGAN2 network trained on the Flickr Face HQ image dataset. Example images sampled from the respective StyleGANs are also included. The datasets themselves are not included in this repository. The weights are stored as `.pkl` files. The code and instructions to load and use the weights can be found at https://github.com/comp-imaging-sci/pic-recon...

ORCIDs mapped to PubMed authors

Vetle Torvik
The dataset is based on a snapshot of PubMed taken in December 2018 (NLMs baseline 2018 plus updates throughout 2018), and for ORCIDs, primarily, the 2019 ORCID Public Data File https://orcid.org/. Matching an ORCID to an individual author name on a PMID is a non-trivial process. Anyone can create an ORCID and claim to have contributed to any published work. Many records claim too many articles and most claim too few. Even though ORCID records...

Bacillus-based direct-fed microbial reduces the pathogenic synergy of a co-infection with Salmonella enterica serovar Choleraesuis and porcine reproductive and respiratory syndrome virus

Federico Zuckermann
Raw data and its analysis collected from a trial designed to test the impact of providing a Bacillus-based direct-fed microbial (DFM) on the syndrome resulting from orally infecting pigs with either Salmonella enterica serotype Choleraesuis (S. Choleraesuis) alone, or in combination with an intranasal challenge, three days later, with porcine reproductive and respiratory syndrome virus (PRRSV).

State of Illinois - Common Spatial Geodatabase for the Social Sciences

Michael Lotspeich-Yadao
This geodatabase serves two purposes: 1) to provide State of Illinois agencies with a fast resource for the preparation of maps and figures that require the use of shape or line files from federal agencies, the State of Illinois, or the City of Chicago, and 2) as a start for social scientists interested in exploring how geographic information systems (whether this is data visualization or geographically weighted regression) can bring new meaning to the interpretation...

Data for “Invasive virile crayfish (Faxonius virilis Hagen, 1870) hybridizes with native spothanded crayfish (Faxonius punctimanus Creaser, 1933) in the Current River watershed of Missouri, U.S.”

Zachary Rozansky, Eric Larson & Christopher Taylor
This dataset contains 1 CSV file: RozanskyLarsonTaylorMsat.csv which contains microsatellite fragment lengths for Virile and Spothanded Crayfish from the Current River watershed of Missouri, U.S., and complimentary data, including assignments to species by phenotype and COI sequence data, GenBank accession numbers for COI sequence data, study sites with dates of collection and geographic coordinates, and Illinois Natural History Survey (INHS) Crustacean Collection lots where specimens are stored.

High-Throughput Single-Organelle Dataset

Daniel Castro & Jonathan Sweedler
The dataset contains the high-throughput matrix-assisted laser desorption/ionization mass spectrometry XmL files for the atrial gland and red hemiduct of Aplysia californica.

Burton Endo electron micrograph library

Nathan Schroeder
The data are original electron micrographs from the lab of the late Dr. Burt Endo of the USDA. These data were digitized from photographic prints and glass plate negatives at 600 DPI as 16 bit TIFF files. This second version added 10 new ZIP files from the Endo data collection. "Endo folder database.xlsx" is updated to reflect the addition. Information in "ReadmeFile name formatting.docx" remains the same as in V1.

Machine learning enabled phenotyping for GWAS and TWAS of WUE traits in 869 field-grown sorghum accessions

John Ferguson, Samuel Fernandes, Brandon Monier, Nathan Miller, Dylan Allen, Anna Dmitrieva, Peter Schmuker, Roberto Lozano, Ravi Valluru, Edward Buckler, Michael Gore, Patrick Brown, Edgar Spalding & Andrew Leakey
This dataset contains the images of a photoperiod sensitive sorghum accession population used for a GWAS/TWAS study of leaf traits related to water use efficiency in 2016 and 2017. *Note: new in this second version is that JPG images outputted from the nms files were added Accessions_2016.zip and Accessions_2017.zip: contain raw images produced by Optical Topometer (nms files) for all sorghum accessions. Images can be opened with Nanofocus μsurf analysis extended software (Oberhausen,Germany). Accessions_2016_jpg.zip and...

White and Red Sorghum as Primary Carbohydrate Sources in Extruded Diets of Felines

Maria Cattai de Godoy
- The research objectives were to evaluate the effect of dietary supplementation of white (WSH) and red (RSH) sorghum grains on gastrointestinal health of felines through the determination of apparent total tract macronutrient digestibility (ATTD), fecal characteristics, fermentative end-products, and microbiota, compared with a traditional corn-based diet (Control).
- Nine, intact, male domestic shorthaired cats (average age: 0.8 ± 0.00 yr; average weight: 4.5 ± 0.23 kg) were used in a triplicated 3 × 3...

Model files and GIS data for risk assessment in the Cambrian-Ordovician sandstone aquifer system, Northeastern Illinois, predevelopment-2070

Daniel Hadley, Daniel Abrams, Devin Mannix & Cecilia Cullen
These datasets contain modeling files and GIS data associated with a risk assessment study for the Cambrian-Ordovician sandstone aquifer system in Illinois from predevelopment (1863) to the year 2070. Modeling work was completed using the Illinois Groundwater Flow Model, a regional MODFLOW model developed for water supply planning in Illinois, as a base model. The model is run using the graphical user interface Groundwater Vistas 7.0. The development and technical details of the base Illinois...

Data for Anomalous density fluctuations in a strange metal

Peter Abbamonte
This is the complete dataset for the "Anomalous density fluctuations in a strange metal" Proceedings of the National Academy of Sciences publication (https://doi.org/10.1073/pnas.1721495115). This is an integration of the Zenodo dataset which includes raw M-EELS data. METHODOLOGICAL INFORMATION 1. Description of methods used for collection/generation of data: Data have been collected with a M-EELS instrument and according to the data acquisition protocol described in the original PNAS publication and in SciPost Phys. 3, 026 (2017)...

Survey of Cover Crop, Conservation Tillage and Nutrient Management Practice Usage in Illinois and 2020 Fall Covers for Spring Savings Crop Insurance Discount Program Participation

Menglin Liu & Benjamin Gramig
Please cite as: Menglin Liu and Benjamin M. Gramig. "Survey of Cover Crop, Conservation Tillage and Nutrient Management Practice Usage in Illinois and 2020 Fall Covers for Spring Savings Crop Insurance Discount Program Participation." Report to the Illinois Department of Agriculture and Fall Covers for Spring Savings working group. Center for the Economics of Sustainability and Department of Agricultural and Consumer Economics, University of Illinois at Urbana-Champaign. 2021. https://doi.org/10.13012/B2IDB-5222984_V1

Data for: Higher-order interaction between species inhibits bacterial invasion of a phototroph-predator microbial community

Harry (Avery) Mickalide & Seppe Kuehn
These are abundance dynamics data and simulations for the paper "Higher-order interaction between species inhibits bacterial invasion of a phototroph-predator microbial community". In this V2, data were converted in Python, in addition to MATLAB and more information on how to work with the data was included in the Readme.

Microclimatic Temperature and Vegetation Structure in Great Smoky Mountains National Park

Samuel Stickley & Jennifer Fraterrigo
This dataset consists of microclimatic temperature and vegetation structure maps at a 3-meter spatial resolution across the Great Smoky Mountains National Park. Included are raster models for sub-canopy, near-surface, minimum and maximum temperature averaged across the study period, season, and month during the growing season months of March through November from 2006-2010. Also available are the topographic and vegetation inputs developed for the microclimate models, including LiDAR-derived vegetation height, LiDAR-derived vegetation structure within four height...

Miscanthus grass as a novel functional fiber source in extruded feline diets

Maria Cattai de Godoy
- The aim of this research was to evaluate the novel dietary fiber source, miscanthus grass, in comparison to traditional fiber sources, and their effects on the microbiota of healthy adult cats. Four dietary treatments, cellulose (CO), miscanthus grass fiber (MF), a blend of miscanthus fiber and tomato pomace (MF+TP), or beet pulp (BP) were evaluated.

- The study was conducted using a completely randomized design with twenty-eight neutered adult, domesticated shorthair cats (19 females and...

Spatial accessibility of COVID-19 healthcare resources in Illinois, USA

Jeon-Young Kang, Alexander Michels, Fangzheng Lyu, Shaohua Wang, Nelson Agbodo, Vincent L Freeman, Shaowen Wang & Padmanabhan Anand
This dataset contains all the code, notebooks, datasets used in the study conducted to measure the spatial accessibility of COVID-19 healthcare resources with a particular focus on Illinois, USA. Specifically, the dataset measures spatial access for people to hospitals and ICU beds in Illinois. The spatial accessibility is measured by the use of an enhanced two-step floating catchment area (E2FCA) method (Luo & Qi, 2009), which is an outcome of interactions between demands (i.e, #...

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