64,172 Works

INRA:Quercus petraea:442

GnpIS
442 is a Quercus petraea accession from GnpIS.

INRA:Quercus petraea:342

GnpIS
342 is a Quercus petraea accession from GnpIS.

INRA:Grapevine:2233Mtp2

GnpIS
Madeleine de Clermont (thermo.) is a Grapevine accession from GnpIS.

INRA:Forage:4992

GnpIS
FE891 is a Forage accession from GnpIS.

INRA:Grapevine:2593Mtp1

GnpIS
White Cinsaut is a Grapevine accession from GnpIS.

INRA:Grapevine:23298Mtp16

GnpIS
Mtp3298-16 is a Grapevine accession from GnpIS.

IPK:Beta vulgaris vulgaris cv. Fodder beet:BETA 2254

GnpIS
AKER_516 is a Beta vulgaris vulgaris cv. Fodder beet accession from GnpIS.

INRA:Grapevine:0Bdx606

GnpIS
NEBBIOLO is a Grapevine accession from GnpIS.

Genome assembly and annotation of Plasmopara viticola, the grapevine downy mildew pathogen

Yann Dussert, Carole Couture, Isabelle D. Mazet, Jérôme Gouzy, Marie-Christine Piron, Claire Kuchly, Olivier Bouchez, Claude Rispe, Pere Mestre & François Delmotte
This dataset includes the assembly and annotation of the Plasmopara viticola genome (INRA-PV221 isolate), following genome sequencing using PacBio long reads at deep coverage. The paper describing the genome is now published in Genome Biology and Evolution (doi.org/10.1093/gbe/evz048). Archives can contain README files with important information, ignore them at your own risk. If you have any question, request or commentary, you can email the dataverse contact.

plasmopara_viticola_INRA-PV221.repeatAnnotation.tar.gz

Yann Dussert, Carole Couture, Isabelle D. Mazet, Jérôme Gouzy, Marie-Christine Piron, Claire Kuchly, Olivier Bouchez, Claude Rispe, Pere Mestre & François Delmotte
Annotation of repeat sequences in the genome of Plasmopara viticola. Includes repeat annotation in gff3 format and repeat library in fasta format.

plasmopara_viticola_INRA-PV221.geneAnnotation.tar.gz

Yann Dussert, Carole Couture, Isabelle D. Mazet, Jérôme Gouzy, Marie-Christine Piron, Claire Kuchly, Olivier Bouchez, Claude Rispe, Pere Mestre & François Delmotte
Gene annotation of the Plasmopara viticola genome. Includes annotation in gff3 format, a fasta file with protein sequences, and training files for augustus.

plasmopara_viticola_INRA-PV221.functionalAnnot.tar.gz

Yann Dussert, Carole Couture, Isabelle D. Mazet, Jérôme Gouzy, Marie-Christine Piron, Claire Kuchly, Olivier Bouchez, Claude Rispe, Pere Mestre & François Delmotte
Functional annotation of the Plasmopara viticola proteome. Includes blast2Go results and list of secreted proteins.

plasmopara_viticola_INRA-PV221.assembly.PBv1.fasta.gz

Yann Dussert, Carole Couture, Isabelle D. Mazet, Jérôme Gouzy, Marie-Christine Piron, Claire Kuchly, Olivier Bouchez, Claude Rispe, Pere Mestre & François Delmotte
Genome assembly of Plasmopara viticola using PacBio long reads at high coverage.

IFV:Grapevine:300Ang31

GnpIS
Sauvignon blanc is a Grapevine accession from GnpIS.

INRA:Rapeseed:RAPSO_135

GnpIS
Amber is a Rapeseed accession from GnpIS.

INRA:Grapevine:1100Mtp1

GnpIS
Prosperi 8 is a Grapevine accession from GnpIS.

INRA:Quercus petraea:245

GnpIS
245 is a Quercus petraea accession from GnpIS.

INRA:Grapevine:504Mtp1

GnpIS
Petit Bouschet x Morrastel n°3 is a Grapevine accession from GnpIS.

INBO:Populus x generosa:87002257

GnpIS
87002257 is a Populus x generosa accession from GnpIS.

INRA:Cherry:V0182

GnpIS
Noire de Pitfam is a Cherry accession from GnpIS.

INRA:Wheat:35969

GnpIS
9126 is a Wheat accession from GnpIS.

INRA:Quercus robur:1981

GnpIS
1981 is a Quercus robur accession from GnpIS.

INRA:Quercus petraea:N091

GnpIS
N091 is a Quercus petraea accession from GnpIS.

INRA:Maize:FRA0410785

GnpIS
Shignomata.2 is a Maize accession from GnpIS.

INRA:Barley:11511

GnpIS
PALMA is a Barley accession from GnpIS.

Registration Year

  • 2018
    64,172

Resource Types

  • PhysicalObject
    62,457
  • Dataset
    1,533
  • Other
    13
  • Text
    13
  • Audiovisual
    4
  • Image
    3
  • Event
    1