This is readme for VCC-LF dataset. This dataset provides light field mat files that capture by Lytro I. The light field resolusion is [h,w,u,v,d]. If you use these data or our toolkit code, please cite our paper properly @inproceedings{ lirsiggraphasia2019, title={Hierarchical and View-invariant Light Field Segmentation by Maximizing Entropy Rate on 4D Ray Graphs}, author={Li, Rui and Heidrich, Wolfgang}, booktitle={ACM Transactions on Graphics (Proc. SIGGRAPH Asia)}, year={2019}, publisher={ACM} }

This Dataset contains DNA sequences of the human genome hg38 from GENCODE folder at EBI ftp server (ftp://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_28/GRCh38.primary_assembly.genome.fa.gz) A-Positive set (PAS sequences) Using GENCODE annotation for poly(A) (ftp://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_28/gencode.v28.polyAs.gff3.gz) We selected poly(A) signal annotation. Using bedtools-slop option, we found regions extended 300 bp upstream and 300 bp downstream of the poly(A) hexamer. With the bedtools-getfasta option, we extracted 606 bp fasta sequences from these regions. After eliminating duplicates, we obtained 37’516 presumed true functional poly(A) signal...

This dataset is the supporting information for the article Osipov et. al., The role of the SO2 radiative effect in sustaining the volcanic winter and soothing the Toba impact on climate, Journal of Geophysical Research: Atmospheres, https://doi.org/10.1029/2019JD031726. It includes the model, rundecks, auxiliary information and other data necessary to reproduce the simulations described in the paper.

The files associated with this dataset are the Genbank, GFF and protein coding-sequence (CDSs) files of a plant growth promoting bacteria isolated from the root endosphere of a pioneer desert plant in Jizan, Saudi Arabia. Genome annotation was carried out using the Automatic Annotation of Microbial Genomes (AAMG) which is an integrated module in the in-house INDIGO-Desert v1.1 pipeline (Alam et al., 2013).

[Update on 2020/02/20] Uploaded the raw intensity images at 0, 45, 90 and 135 degrees. This is to facilitate research work for other users. Previous .mat files were deleted because they can be generated with these raw images. Corresponding code was updated in main.m. This polarization image dataset is a collection of 40 high resolution color polarization data, with four raw intensity images with polarization angles at 0, 45, 90 and 135 degrees for each...

The files associated with this dataset are the Genbank, GFF and protein coding-sequence (CDSs) files of a plant growth promoting bacterium isolated from the root endosphere of a pioneer desert plant in Jizan, Saudi Arabia. Genome annotation was carried out using the Automatic Annotation of Microbial Genomes (AAMG) which is an integrated module in the in-house INDIGO-Desert v1.1 pipeline (Alam et al., 2013).

The files associated with this dataset are the Genbank, GFF and protein coding-sequence (CDSs) files of a plant growth promoting bacterium isolated from the root endosphere of a pioneer desert plant in Jizan, Saudi Arabia. Genome annotation was carried out using the Automatic Annotation of Microbial Genomes (AAMG) which is an integrated module in the in-house INDIGO-Desert v1.1 pipeline (Alam et al., 2013).

The files associated with this dataset are the GenBank, GFF and protein coding-sequence (CDSs-FASTA) files of a plant growth promoting bacteria isolated from the root endosphere of a pioneer desert plant in Jizan, Saudi Arabia. Genome annotation was carried out using the Automatic Annotation of Microbial Genomes (AAMG) which is an integrated module in the in-house INDIGO-Desert v1.1 pipeline (Alam et al., 2013).