808 Works

Cu65

Salt David
Copper concentrations in leaves

rosetteDM

Vasseur Francois
Rosette dry mass (mg) measured at the end of the life cycle, at fruit ripening

LRL75

Julkowska Magdalena
EZ-Rhizo - cummulative lateral root length at 75 mM NaCl

Abscisic acid (ABA) treatment

Ristova Daniela
Ristova et al., (2018): Natural Genetic Variation Shapes Root System Responses to Phytohormones in Arabidopsis. Plant Journal. DOI: 10.1111/tpj.14034.

('clim-aet10_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

FT GH

Admin Admin
Flowering time was scored as the number of days between germination date and appearance of the first flower

('PF-mean_Total_length_day004_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

Leaf roll 16

Admin Admin
Results expressed as binary data, determined by the presence (1) or absence (0) of rolled leaves in all 4 plants / accession at 5 weeks growth

clim-aet6

Exposito-Alonso Moises
Actual evapotranspiration of June (mm)

GR21 cold

Kerdaffrec Envel
The germination rate of seeds (percentage of germinated seeds) after-ripened for 21 days (GR21) was estimated for each genotype following standard methods (Alonso Blanco et al. 2003). Briefly, about 75 seeds per genotype were spread on wet filter paper (Whatman, ref. 1001-047) in Petri dishes (Greiner Bio-One, ref. 628102) that were subsequently placed in moisture chambers to maintain high, constant humidity (close to 99%). Moisture chambers consisted of reasonably air-tight, transparent plastic boxes (Ikea), whose...

Anthocyanin 16

Admin Admin
Results expressed as binary data, determined by the presence (1) or absence (0) of anthocyanin in all 4 plants / accession after 5wks of growth

Mean(TLRL) IAA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

('DTFplantingSummerLocSweden2009_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

aLRL0

Julkowska Magdalena
EZ-Rhizo - average lateral root length at 75 mM NaCl

('Mean(LR.no)_C_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

YEL

Admin Admin
Yellowing is a precocious,more diffused leaf chlorosis.Accessions were divided in three subgroups (mild, intermediate and severe) according to the severity of the yellowing.

Mean(LRD R) IAA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

('Cd114_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

('avrRpm1_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

Rb85

Salt David
Rubidium concentrations in leaves

('rFitness_thp_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

Mo98

Admin Admin
Molybdenum concentrations in leaves, grown in soil. Elemental analysis was performed with an ICP-MS (PerkinElmer). Sample normalized to calculated weights as described in Baxter et al., 2008

('Depth75_raw_Full imputed genotype_amm',)

AraGWAS Catalog
GWAS study using the method "amm" with the "Full imputed genotype" genotype and "raw"" transformation

Mean(R) ABA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

SizeMainEffect2009

Admin Admin

Registration Year

  • 2016
    153
  • 2017
    193
  • 2018
    9
  • 2019
    453

Resource Types

  • Dataset
    788
  • Collection
    20