849 Works

Mean(LR.no) ABA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

Mean(LRD R) ABA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

Mean(LRR) ABA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

Control (C) treatment

Ristova Daniela
Ristova et al., (2018): Natural Genetic Variation Shapes Root System Responses to Phytohormones in Arabidopsis. Plant Journal. DOI: 10.1111/tpj.14034.

Mean(LR.no) IAA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

Mean(LRR) IAA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

Cytokinin (CK) treatment

Ristova Daniela
Ristova et al., (2018): Natural Genetic Variation Shapes Root System Responses to Phytohormones in Arabidopsis. Plant Journal. DOI: 10.1111/tpj.14034.

Mean(LR.no) CK

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

Mean(TRL) IAA

Ristova Daniela
After 3 days of treatment, plates were scanned with CCD flatbed scanners (EPSON Perfection V600 Photo, Seiko Epson, Nagano, Japan), and images used to quantify root parameters with FIJI, by using the tool ‘segmented line’ (Schindelin et al., 2012) as described in Ristova and Busch (2017). In particular, we quantified: primary root length on day 10 (P), growth rate of P after treatment (P2), branching zone or the length of P between the first and...

stomata density 261

Korte Arthur
Stomata density was measured using high-throughput microscopy from 7 week old Arabidopsis plants This is the overlapping set of 261 plants for which size, density and deltaC13 was measured on the same plants.

delta 13C

Korte Arthur
The rosettes of 7 week old plants were placed in individual paper bags after microscopic imaging was completed and dried at 70 °C for 3 weeks. Plant material was then ground to fine powder using a 25mm steel bead and a mixer mill (Retsch, MM 301). Isotope composition was determined using an ISOTOPE cube elemental analyzer coupled to an Isoprime 100 isotope ratio mass spectrometer (both from Elementar, Hanau, Germany) according to (Gowik, Bräutigam, Weber,...

PC3sc0

Julkowska Magdalena
3rd Principal Component - pulled using all RSA traits with prior scaling at 0 mM NaCl

Branched75

Julkowska Magdalena
EZ-Rhizo - length of the Branched Zone at 75 mM NaCl

PC2sc75

Julkowska Magdalena
2nd Principal Component - pulled using all RSA traits with prior scaling at 75 mM NaCl

Salt induced changes in Root System Architecture

Julkowska Magdalena
Salt stress affects not only plant size, but also plant architecture. In this study, we focused on salt stress-induced changes to Root System Architecture, by germinating the seedlings on vertical agar growth medium (no salt) and transplanting 4 days old seedlings into plates containing 0, 75 and 125 mM NaCl. The Root System Architecture phenotypes were quantified using EZ-Rhizo software for at least 4 replicates per accession per condition. The plants grown under control conditions...

Depth0

Julkowska Magdalena
EZ-Rhizo - Main Root Depth - a vertical line from the top-most to bottom-most point of the main root - at 0 mM NaCl

MRVA0

Julkowska Magdalena
EZ-Rhizo - Main Root Vector Angle at 0 mM NaCl

noLRpMR0

Julkowska Magdalena
EZ-Rhizo - number of lateral roots per main root at 0 mM NaCl

LRDpBZ0

Julkowska Magdalena
EZ-Rhizo - Lateral Root Density per cm of Branching Zone at 0 mM NaCl

LRLpMRL0

Julkowska Magdalena
Ratio of Lateral Root Length (cummulative) and Main Root Length at 0 mM NaCl

LRDpMR125

Julkowska Magdalena
EZ-Rhizo - Lateral Root Density per cm of Main Root at 125 mM NaCl

rSurvival fruit mlp

Exposito-Alonso Moises
relative survival to reproduction (proportion of plants or 1/0 alive/dead) in Madrid low precipitation treatment and population (high density) replicate

rSurvival fruit thi

Exposito-Alonso Moises
relative survival to reproduction (proportion of plants or 1/0 alive/dead) in Tuebingen high precipitation treatment and individual (low density) replicate

rSurvival fruit tli

Exposito-Alonso Moises
relative survival to reproduction (proportion of plants or 1/0 alive/dead) in Tuebingen low precipitation treatment and individual (low density) replicate

rSeeds mhi

Exposito-Alonso Moises
relative seed production (# offspring, excluding plants that died) in Madrid high precipitation treatment and individual (low density) replicate

Registration Year

  • 2020
    41
  • 2019
    453
  • 2018
    9
  • 2017
    193
  • 2016
    153

Resource Types

  • Dataset
    826
  • Collection
    23