ClonalKinetic Data and Intermediate Results of SimiC

Jianhao Peng & Idoia Ochoa
This dataset contains the ClonalKinetic dataset that was used in SimiC and its intermediate results for comparison. The Detail description can be found in the text file 'clonalKinetics_Example_data_description.txt' and 'ClonalKinetics_filtered.DF_data_description.txt'. The required input data for SimiC contains: 1. ClonalKinetics_filtered.clustAssign.txt => cluster assignment for each cell. 2. ClonalKinetics_filtered.DF.pickle => filtered scRNAseq matrix. 3. ClonalKinetics_filtered.TFs.pickle => list of driver genes. The results after running SimiC contains: 1. ClonalKinetics_filtered_L10.01_L20.01_Ws.pickle => inferred GRNs for each cluster 2. ClonalKinetics_filtered_L10.01_L20.01_AUCs.pickle =>...
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