Automatic segmentation of the IFOF stem region (stem-ROI) using a Convolutional Neural Network (CNN). The dataset is composed of colored Fraction Anisotropy (cFA) images paired with the corresponding labeled stem-ROIs. In total there are 158 subjects, in which 128 have been used for training and 30 for test. For the test subjects the inferred stem-ROIs has been computed with the "TractSeg-BrainLife-test" app.
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