Datasets for evaluating FastqPuri and other RNA sequencing pre-processing tools.

J.C. (Julia) Engelmann
The collection consists of RNA sequencing (RNA-seq) datasets in fastq format which were used to evaluate FastqPuri ({}). FastqPuri is a command line software which evaluates the quality of RNA-seq data, filters low quality and adapter sequences as well as sequence reads from biological contamination. The sequence data originate from samples of two different model organisms, Homo sapiens (human) and Arabidopsis thaliana (thale cress). Another data set was simulated to represent a human sample contaminated...
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