Data from: SNP discovery and gene annotation in the surf clam Mesodesma donacium

Cristian Gallardo-Escárate, Valentina Valenzuela-Muñoz, Gustavo Núñez-Acuña & Pilar Haye
The main objective of this research was to identify single-nucleotide polymorphisms (SNPs) from an Expressed Sequences Tags (EST) data set generated by 454 pyrosequencing in the soft clam Mesodesma donacium. A total of 180 159 ESTs were yielded from a M. donacium cDNA library. De novo assembly was performed using stringent calling parameters, producing 10 178 contigs and 41 765 singletons. Here, a total of 2594 SNPs were discovered related to 613 consensus sequences, achieving...
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