Data from: The effect of copy number hemiplasy on gene family evolution

Qiuyi Li, Yao-Ban Chan, Nicolas Galtier & Celine Scornavacca
The evolution of gene families is complex, involving gene-level evolutionary events such as gene duplication, horizontal gene transfer, and gene loss (DTL), and other processes such as incomplete lineage sorting (ILS). Because of this, topological differences often exist between gene trees and species trees. A number of models have been recently developed to explain these discrepancies, the most realistic of which attempt to consider both gene-level events and ILS. When unified in a single model,...
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