Metagenomics: A viable tool for reconstructing herbivore diet

Physilia Chua, Alex Crampton-Platt, Youri Lammers, Inger Alsos, Sanne Boessenkool & Kristine Bohmann
Metagenomics can generate data on the diet of herbivores, without the need for primer selection and PCR enrichment steps as is necessary in metabarcoding. Metagenomic approaches to diet analysis have remained relatively unexplored, requiring validation of bioinformatic steps. Currently, no metagenomic herbivore diet studies have utilised both chloroplast and nuclear markers as reference sequences for plant identification, which would increase the number of reads that could be taxonomically informative. Here, we explore how in silico...
1 citation reported since publication in 2021.
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