Data from: Reducing cryptic relatedness in genomic datasets via a central node exclusion algorithm

Pablo A.S. Fonseca, Thiago P. Leal, Fernanda Caroline Santos, Mateus Henrique Gouveia, Samir Id-Lahoucine, Izinara C. Rosse, Ricardo V. Ventura, Frank Angelo T. Bruneli, Marco Antônio Machado, Maria Gabriela C.D. Peixoto, Eduardo Tarazona-Santos, Maria Raquel S. Carvalho & Pablo A. S. Fonseca
Cryptic relatedness is a confounding factor in genetic diversity and genetic association studies. Development of strategies to reduce cryptic relatedness in a sample is a crucial step for downstream genetic analyzes. The present study uses a node selection algorithm, based on network degrees of centrality, to evaluate its applicability and impact on evaluation of genetic diversity and population stratification. 1,036 Guzerá (Bos indicus) females were genotyped using Illumina Bovine SNP50 v2 BeadChip. Four strategies were...
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