Time-series drinking water metagenomes: Assemblies & MAGs

Solize Vosloo, Linxuan Huo, Christopher Anderson, Maria Sevillano & Ameet Pinto
Reconstructing microbial genomes from metagenomic short-read data can be challenging due to the unknown and uneven complexity of microbial communities. This complexity encompasses highly diverse populations which often includes strain variants. Reconstructing high-quality genomes is a crucial part of the metagenomic workflow as subsequent ecological and metabolic inferences depend on their accuracy, quality and completeness. In contrast to microbial communities in other ecosystems, there has been no systematic assessment of genome-centric metagenomic workflows for drinking...
1 citation reported since publication in 2021.
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