SNP dataset retrieved from 176 whole-genome sequences (117 A. m. iberiensis, 28 A. m. carnica and 31 A. m. ligustica)Dora Henriques, Melanie Parejo, Alain Vignal, David Wragg, Andreas Wallberg, Matthew Webster & M. Alice Pinto
The dataset contains a total of 2,366,382 SNPs detected between 117 A. m. iberiensis, 28 A. m. carnica and 31 A. m. ligustica. SNP calling was performed using three different variant calling tools: GATK's, SAMtools’ mpileup 1.1 and PLATYPUS 0.8.1 Details for SNP processing and quality control is provided in the paper and its supplementary information.
This data repository is not currently reporting usage information. For information on how your repository can submit usage information, please see our documentation.