Id1, Id2, Id3, and Id4 in adult mouse brain lateral wall V-SVZ neural stem cells
Hyung-song Nam, Robert Benezra & Mario Capecchi
The R script in Nam and Capecchi, 2020 used to analyze the scRNA-seq dataset in Mizrak et al., 2019 (https://doi.org/10.1016/j.celrep.2018.12.044) was updated to Seurat 3. Results are similar to Seurat 2.
Clustering result.
Selected marker genes RNA in clusters.
Tabulated results of AverageExpression command for selected genes RNA.
To validate the AverageExpression results, qRT-PCR measurements of several genes RNA in Morizur et al., 2018 (https://doi.org/10.1016/j.stemcr.2018.06.005) were utilized. These selected genes RNA levels were compared against the AverageExpression results. The...
Clustering result.
Selected marker genes RNA in clusters.
Tabulated results of AverageExpression command for selected genes RNA.
To validate the AverageExpression results, qRT-PCR measurements of several genes RNA in Morizur et al., 2018 (https://doi.org/10.1016/j.stemcr.2018.06.005) were utilized. These selected genes RNA levels were compared against the AverageExpression results. The...
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