Two pipelines as annotation system for non-coding RNAs from sequence data

Agnes Hotz-Wagenblatt, Coral Del Val, Christopher Previti &
For profiling using small RNA sequencing we developed a consensus database combining several non-coding RNA databases to be used for annotation. Two pipelines were created for data analysis, one for cleaning and mapping the reads (sRNAmapper) and one for the annotation by comparing the sequence reads to our non-coding RNA database (ncRNAannotator).
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