4 Works

Data from: Fisher’s geometric model predicts the effects of random mutations when tested in the wild

Frank W. Stearns & Charles B. Fenster
Fisher's Geometric Model of Adaptation (FGM) has been the conceptual foundation for studies investigating the genetic basis of adaptation since the onset of the neo Darwinian synthesis. FGM describes adaptation as the movement of a genotype toward a fitness optimum due to beneficial mutations. To date, one prediction of FGM, the probability of improvement is related to the distance from the optimum, has only been tested in microorganisms under laboratory conditions. There is reason to...

Data from: Protein synthesis inhibition in the peri-infarct cortex slows motor recovery in rats

Maximilian Schubring-Giese, Susan Leemburg, Andreas Rüdiger Luft & Jonas Aurel Hosp
Neuroplasticity and reorganization of brain motor networks are thought to enable recovery of motor function after ischemic stroke. Especially in the cortex surrounding the ischemic scar (i.e., peri-infarct cortex), evidence for lasting reorganization has been found at the level of neurons and networks. This reorganization depends on expression of specific genes and subsequent protein synthesis. To test the functional relevance of the peri-infarct cortex for recovery we assessed the effect of protein synthesis inhibition within...

Data from: EDAPHOLOG monitoring system: automatic, real-time detection of soil microarthropods

Miklós Dombos, Oxána Bánszegi, Katalin Szlávecz & Andrés Kosztolányi
Soil microarthropods as organic matter decomposers play an important role in soil functioning thus providing ecosystem services. However, ecosystem scale investigations on their abundance and dynamics are scarce because their high spatio-temporal heterogeneity requires huge sample size. Processing and identifying large number of individuals are extremely labour-intensive. We prototyped a device called EDAPHOLOG monitoring system that consists of (1) a probe that catches and detects microarthropods and estimates their body size; (2) a data logger...

Data from: A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda

François Blanquart, Mary Kate Grabowski, Joshua Herbeck, Fred Nalugoda, David Serwadda, Michael A. Eller, Merlin L. Robb, Ronald Gray, Godfrey Kigozi, Oliver Laeyendecker, Katrina A. Lythgoe, Gertrude Nakigozi, Thomas C. Quinn, Steven J. Reynolds, Maria J. Wawer & Christophe Fraser
Evolutionary theory hypothesizes that intermediate virulence maximizes pathogen fitness as a result of a trade-off between virulence and transmission, but empirical evidence remains scarce. We bridge this gap using data from a large and long-standing HIV-1 prospective cohort, in Uganda. We use an epidemiological-evolutionary model parameterised with this data to derive evolutionary predictions based on analysis and detailed individual-based simulations. We robustly predict stabilising selection towards a low level of virulence, and rapid attenuation of...

Registration Year

  • 2016

Resource Types

  • Dataset


  • Johns Hopkins University
  • University of Washington
  • Walter Reed Army Institute of Research
  • University Hospital of Zurich
  • National Institutes of Health
  • National Autonomous University of Mexico
  • University of Debrecen
  • Rakai Health Sciences Program
  • Makerere University
  • University of Veterinary Medicine