62 Works

Foraging behaviour of Parus major held in temporary captivity

R Thorogood, H Kokko & J Mappes
The data set describes foraging decisions by great tits (Parus major), held in temporary captivity. Data were collected from birds caught from forest at the University of Jyväskylä Research Station, Konnevesi (62°37.7'N 026°17'E), Finland, and were collected during the winter of 2013-2014. Birds were presented with (1) two different coloured plastic cups, or (2) two different artificial prey (almond pieces inside a paper packet and printed with a black and white symbol). One symbol was...

Data from: The physical boundaries of public goods cooperation between surface-attached bacterial cells

Michael Weigert & Rolf Kuemmerli
Bacteria secrete a variety of compounds important for nutrient scavenging, competition mediation and infection establishment. While there is a general consensus that secreted compounds can be shared and therefore have social consequences for the bacterial collective, we know little about the physical limits of such bacterial social interactions. Here, we address this issue by studying the sharing of iron-scavenging siderophores between surface-attached microcolonies of the bacterium Pseudomonas aeruginosa. Using single-cell fluorescence microscopy, we show that...

Data from: A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny

(LPWG), Legume Phylogeny Working Group, Anne Bruneau, Nasim Azani, Marielle Babineau, Edeline Gagnon, Carole Sinou, Royce Steeves, Erin Zimmerman, C. Donovan Bailey, Lynsey Kovar, Madhugiri Nageswara-Rao, Hannah Banks, RuthP. Clark, Manuel De La Estrella, Peter Gasson, GeoffreyC. Kite, BenteB. Klitgaard, GwilymP. Lewis, Danilo Neves, Gerhard Prenner, María De Lourdes Rico-Arce, ArianeR. Barbosa, Maria Cristina López-Roberts, Luciano Paganucci De Queiroz, PétalaG. Ribeiro … & Tingshuang Yi
The classification of the legume family proposed here addresses the long-known non-monophyly of the traditionally recognised subfamily Caesalpinioideae, by recognising six robustly supported monophyletic subfamilies. This new classification uses as its framework the most comprehensive phylogenetic analyses of legumes to date, based on plastid matK gene sequences, and including near-complete sampling of genera (698 of the currently recognised 765 genera) and ca. 20% (3696) of known species. The matK gene region has been the most...

Data from: Socially informed dispersal in a territorial cooperative breeder

Gabriele Cozzi, Nino Maag, Luca Börger, Tim H. Clutton-Brock & Arpat Ozgul
1. Dispersal is a key process governing the dynamics of socially and spatially structured populations, and involves three distinct stages: emigration, transience, and settlement. At each stage, individuals have to make movement decisions, which are influenced by social, environmental, and individual factors. Yet, a comprehensive understanding of the drivers that influence such decisions is still lacking, particularly for the transient stage during which free-living individuals are inherently difficult to follow. 2. Social circumstances such as...

Data from: No evidence of inbreeding depression in sperm performance traits in wild song sparrows

Sylvain Losdat, Ryan R. Germain, Pirmin Nietlisbach, Peter Arcese & Jane M. Reid
Inbreeding is widely hypothesized to shape mating systems and population persistence, but such effects will depend on which traits show inbreeding depression. Population and evolutionary consequences could be substantial if inbreeding decreases sperm performance and hence decreases male fertilisation success and female fertility. However, the magnitude of inbreeding depression in sperm performance traits has rarely been estimated in wild populations experiencing natural variation in inbreeding. Further, the hypothesis that inbreeding could increase within-ejaculate variation in...

Data from: Patterns of activity and body temperature of Aldabra giant tortoises in relation to environmental temperature

Wilfredo Falcón, Richard P. Baxter, Samuel Furrer, Martin Bauert, Jean-Michel Hatt, Gabriela Schaepman-Strub, Arpat Ozgul, Nancy Bunbury, Marcus Clauss, Dennis M. Hansen & Rich P. Baxter
We studied the temperature relations of wild and zoo Aldabra giant tortoises (Aldabrachelys gigantea) focusing on: 1) the relationship between environmental temperature and tortoise activity patterns (n=8 wild individuals), and 2) on tortoise body temperature fluctuations, including how their core and external body temperatures vary in relation to different environmental temperature ranges (seasons; n=4 wild, and n=5 zoo individuals). In addition, we surveyed the literature to review the effect of body mass on core body...

Data from: Climatic factors shape plastic trade-offs in the polyphenic black scavenger fly Sepsis thoracica (Diptera: Sepsidae)

Juan Pablo Busso & Wolf U. Blanckenhorn
Aim: Trade-offs allow individuals to optimize their fitness by tailoring the investment into different traits to variable environmental conditions, such as along geographic gradients. Trade-offs thus can help in adjusting to changing thermal and insolation profiles, especially in small ectotherms, whose body temperature typically follows environmental temperatures closely. Two traits usually involved in latitudinal adaptation are body size and melanism. Since both traits are costly, individuals need to optimize investment into each trait. Here we...

Data from: Interactive life-history traits predict sensitivity of plants and animals to temporal autocorrelation

Maria Paniw, Arpat Ozgul & Roberto Salguero-Gomez
Temporal autocorrelation in demographic processes is an important aspect of population dynamics, but a comprehensive examination of its effects on different life-history strategies is lacking. We use matrix populations models from 454 plant and animal populations to simulate stochastic population growth rates (log λs) under different temporal autocorrelations in demographic rates, using simulated and observed covariation among rates. We then test for differences in sensitivities, or changes, of log λs to changes in autocorrelation among...

Data from: Forecasting range shifts of a cold-adapted species under climate change: are genomic and ecological diversity within species crucial for future resilience?

Spyros Theodoridis, Theofania S. Patsiou, Christophe Randin & Elena Conti
Cold-adapted taxa are experiencing severe range shifts due to climate change and are expected to suffer a significant reduction of their climatically suitable habitats in the next few decades. However, it has been proposed that taxa with sufficient standing genetic and ecologic diversity will better withstand climate change. These taxa are typically more broadly distributed in geographic and ecological niche space, therefore they are likely to endure higher levels of populations loss than more restricted,...

Data from: Evolution of density-dependent movement during experimental range expansions

Emanuel A. Fronhofer, Sereina Gut, Florian Altermatt, E. A. Fronhofer, S. Gut & F. Altermatt
Range expansions and biological invasions are prime examples of transient processes that are likely impacted by rapid evolutionary changes. As a spatial process, range expansions are driven by dispersal and movement behaviour. While it is widely accepted that dispersal and movement may be context-dependent, for instance density-dependent, and best represented by reaction norms, the evolution of density-dependent movement during range expansions has received little experimental attention. We therefore tested current theory predicting the evolution of...

Data from: Frequent and parallel habitat transitions as driver of unbounded radiations in the Cape flora

Yanis Bouchenak-Khelladi & H. Peter Linder
The enormous species richness in the Cape Floristic Region (CFR) of Southern Africa is the result of numerous radiations, but the temporal progression and possible mechanisms of these radiations are still poorly understood. Here, we explore the macroevolutionary dynamics of the Restionaceae, that include 340 species which are found in all vegetation types in the Cape flora and are ecologically dominant in fynbos. Using an almost complete (i.e. 98%) species-level time calibrated phylogeny and models...

Data from: Sexual dimorphism in epicuticular compounds despite similar sexual selection in sex role-reversed seed beetles

Isobel Booksmythe, Howard D. Rundle, Göran Arnqvist, H. D. Rundle, I. Booksmythe & G. Arnqvist
Sexual selection imposed by mating preferences is often implicated in the evolution of both sexual dimorphism and divergence between species in signalling traits. Epicuticular compounds (ECs) are important signalling traits in insects and show extensive variability among and within taxa. Here, we investigate whether variation in the multivariate EC profiles of two sex role-reversed beetle species, Megabruchidius dorsalis and Megabruchidius tonkineus, predicts mate attractiveness and mating success in males and females. The two species had...

Data from: A non-invasive method for sampling the body odour of mammals

Brigitte M. Weiß, Andrea Marcillo, Marta Manser, Ruben Holland, Claudia Birkemeyer & Anja Widdig
1. Olfaction is a central aspect of mammalian communication, providing information about individual attributes such as identity, sex, group membership or genetic quality. Yet, the chemical underpinnings of olfactory cues remain little understood, one of the reasons being the difficulty in obtaining high quality samples for chemical analysis. 2. In the present study we adjusted and evaluated the use of thermal desorption (TD) tubes, commonly used in plant metabolomic and environmental studies, for non-invasive sampling...

Data from: Divergent evolution and niche differentiation within the common peatmoss Sphagnum magellanicum

Narjes Yousefi, Kristian Hassel, Kjell Ivar Flatberg, Petri Kemppainen, Emiliano Trucchi, Arthur Jonathan Shaw, Magni Olsen Kyrkjeeide, Péter Szövényi & Hans Kristen Stenøien
PREMISE OF THE STUDY: Populations with phenotypic polymorphism in discrete characters may be good models for investigating genome evolution and speciation. Sphagnum magellanicum Brid. is found throughout the northern hemisphere, and despite considerable variation in morphological characters, it is considered one of the least taxonomically controversial peatmoss species. We have observed two main morphs of the species associated with different microhabitats. Here we investigated the genomic and environmental basis of this intraspecific morphological variation. METHODS:...

Data from: A reassessment of explanations for discordant introgressions of mitochondrial and nuclear genomes

Timothée Bonnet, Raphaël Leblois, Francois Rousset & Pierre-André Crochet
Hybridization is increasingly recognized as a significant evolutionary process, in particular because it can lead to introgression of genes from one species to another. A striking pattern of discordance in the amount of introgression between mitochondrial and nuclear markers exists such that substantial mitochondrial introgression is often found in combination with no or little nuclear introgression. Multiple mechanisms have been proposed to explain this discordance, including positive selection for introgressing mitochondrial variants, several types of...

Data from: Dispersal in dendritic networks: ecological consequences on the spatial distribution of population densities

Florian Altermatt & Emanuel A. Fronhofer
1. Understanding the consequences of spatial structure on ecological dynamics is a central theme in ecology. Recently, research has recognized the relevance of river and river-analogue network structures, because these systems are not only highly diverse but also rapidly changing due to habitat modifications or species invasions. 2. Much of the previous work on ecological and evolutionary dynamics in metapopulations and metacommunities in dendritic river networks has been either using comparative approaches or was purely...

Data from: Taxonomic delimitation of the rare, eastern North American endemic lichen Santessoniella crossophylla (Pannariaceae)

James C. Lendemer, Heather B. Stone & Erin A. Tripp
The taxonomic delimitation and generic placement of Santessoniella crossophylla (Old Gray Crosslobes), a cyanolichen endemic to eastern North America, are revisited based on newly generated nrITS and mtSSU sequences. A population from Nova Scotia whose identification as S. crossophylla has been questioned is confirmed as belonging to the species. The monospecific genus Rockefellera is introduced to accommodate lichens ascribable to S. crossophylla in light of molecular results herein presented. The new name honors the Rockefeller...

Data from: Habitat filtering determines the functional niche occupancy of plant communities worldwide

Yuanzhi Li, Bill Shipley, Jodi N. Price, Vinícius De L. Dantas, Riin Tamme, Mark Westoby, Andrew Siefert, Brandon S. Schamp, Marko J. Spasojevic, Vincent Jung, Daniel C. Laughlin, Sarah J. Richardson, Yoann Le Bagousse-Pinguet, Christian Schöb, Antonio Gazol, Honor C. Prentice, Nicolas Gross, Jacob Overton, Marcus V. Cianciaruso, Frédérique Louault, Chiho Kamiyama, Tohru Nakashizuka, Kouki Hikosaka, Takehiro Sasaki, Masatoshi Katabuchi … & Yoann Le Bagousse-Pinguet
How the patterns of niche occupancy vary from species-poor to species-rich communities is a fundamental question in ecology that has a central bearing on the processes that drive patterns of biodiversity. As species richness increases, habitat filtering should constrain the expansion of total niche volume, while limiting similarity should restrict the degree of niche overlap between species. Here, by explicitly incorporating intraspecific trait variability, we investigate the relationship between functional niche occupancy and species richness...

Data from: Pedigree-based inbreeding coefficient explains more variation in fitness than heterozygosity at 160 microsatellites in a wild bird population

Pirmin Nietlisbach, Lukas F. Keller, Glauco Camenisch, Frédéric Guillaume, Peter Arcese, Jane M. Reid & Erik Postma
Although the pedigree-based inbreeding coefficient F predicts the expected proportion of an individual's genome that is identical-by-descent (IBD), heterozygosity at genetic markers captures Mendelian sampling variation and thereby provides an estimate of realized IBD. Realized IBD should hence explain more variation in fitness than their pedigree-based expectations, but how many markers are required to achieve this in practice remains poorly understood. We use extensive pedigree and life-history data from an island population of song sparrows...

Data from: Ejaculate evolution in external fertilizers: influenced by sperm competition or sperm limitation?

Wen Bo Liao, Yan Huang, Yu Zeng, Mao Jun Zhong, Yi Luo & Stefan Lüpold
The evolution of sperm quality and quantity is shaped by various selective processes, with sperm competition generally considered the primary selective agent. Particularly in external fertilizers, however, sperm limitation through gamete dispersal can also influence gamete investments, but empirical data examining this effect are limited. Here, we studied the relative importance of sperm competition and the spawning conditions in explaining the macroevolutionary patterns of sperm size and number within two taxa with external fertilization but...

Data from: Increased prenatal maternal investment reduces inbreeding depression in offspring

Kate E. Ihle, Pascale Hutter & Barbara Tschirren
Inbreeding depression refers to the reduction of fitness that results from matings between relatives. Evidence for reduced fitness in inbred individuals is widespread, but the strength of inbreeding depression varies widely both within and among taxa. Environmental conditions can mediate this variation in the strength of inbreeding depression, with environmental stress exacerbating the negative consequences of inbreeding. Parents can modify the environment experienced by offspring, and have thus the potential to mitigate the negative consequences...

Data from: Warming and top predator loss drive ecosystem multifunctionality

Pablo Augusto P. Antiqueira, Owen L. Petchey & Gustavo Quevedo Romero
Global change affects ecosystem functioning both directly by modifications in physicochemical processes, and indirectly, via changes in biotic metabolism and interactions. Unclear, however, is how multiple anthropogenic drivers affect different components of community structure and the performance of multiple ecosystem functions (ecosystem multifunctionality). We manipulated small natural freshwater ecosystems to investigate how warming and top predator loss affect seven ecosystem functions representing two major dimensions of ecosystem functioning, productivity and metabolism. We investigated their direct...

Data from: A structural approach for understanding multispecies coexistence

Serguei Saavedra, Rudolf P. Rohr, Jordi Bascompte, Oscar Godoy, Nathan J.B. Kraft, Jonathan M. Levine & Nathan J. B. Kraft
Although observations of species-rich communities have long served as a primary motivation for research on the coexistence of competitors, the majority of our empirical and theoretical understanding comes from two-species systems. How much of the coexistence observed in species rich communities results from indirect effects among competitors that only emerge in diverse systems remains poorly understood. Resolving this issue requires simple, scalable, and intuitive metrics for quantifying the conditions for coexistence in multispecies systems, and...

Data from: Group cohesion in foraging meerkats: follow the moving ‘vocal hot spot’

Gabriella E.C. Gall, Marta B. Manser & Gabriella E. C. Gall
Group coordination, when ‘on the move’ or when visibility is low, is a challenge faced by many social living animals. While some animals manage to maintain cohesion solely through visual contact, the mechanism of group cohesion through other modes of communication, a necessity when visual contact is reduced, is not yet understood. Meerkats (Suricata suricatta), a small, social carnivore, forage as a cohesive group while moving continuously. While foraging, they frequently emit ‘close calls’, soft...

Data from: Enhancing plant diversity in agricultural landscapes promotes both rare bees and dominant crop-pollinating bees through complementary increase in key floral resources

Louis Sutter, Philippe Jeanneret, Agustín M. Bartual, Gionata Bocci & Matthias Albrecht
1. Enhancing key floral resources is essential to effectively mitigate the loss of pollinator diversity and associated provisioning of pollination functions in agro-ecosystems. However, effective floral provisioning measures may diverge among different pollinator conservation targets, such as the conservation of rare species or the promotion of economically important crop pollinators. We examined to what extent such diverging conservation goals could be reconciled. 2. We analysed plant–bee visitation networks of 64 herbaceous semi-natural habitats representing a...

Registration Year

  • 2017

Resource Types

  • Dataset


  • University of Zurich
  • Swiss Federal Institute of Aquatic Science and Technology
  • Uppsala University
  • Australian National University
  • University of Bern
  • University of Basel
  • University of Sheffield
  • Universidade Federal de Goiás
  • University of California System
  • Federal University of São Carlos
  • University of Queensland
  • University of Cambridge
  • University of Aberdeen
  • University of Lausanne
  • University of Melbourne