5,308 Works

Table S11.xlsx from Transcriptome analysis and mining of genes related to shade tolerance in foxtail millet (Setaria italica (L.) P. Beauv.)

Dan Liu, Yanjiao Cui, Zilong Zhao, Jing Zhang, Suying Li & Zhengli Liu
A stereo interplanting system with foxtail millet beneath chestnut trees is an effective planting method to raise the utilization of land in chestnut orchards, increase yields and improve quality of chestnut nuts. Consequently, exploration of genes involved in shade tolerance response in foxtail millet and breeding shade-tolerant varieties have become urgent issues. In this study, RNA-seq of leaf samples from two shade-tolerant varieties and three shade-intolerant varieties of foxtail millet at the booting stage was...

Table S7.xlsx from Transcriptome analysis and mining of genes related to shade tolerance in foxtail millet (Setaria italica (L.) P. Beauv.)

Dan Liu, Yanjiao Cui, Zilong Zhao, Jing Zhang, Suying Li & Zhengli Liu
A stereo interplanting system with foxtail millet beneath chestnut trees is an effective planting method to raise the utilization of land in chestnut orchards, increase yields and improve quality of chestnut nuts. Consequently, exploration of genes involved in shade tolerance response in foxtail millet and breeding shade-tolerant varieties have become urgent issues. In this study, RNA-seq of leaf samples from two shade-tolerant varieties and three shade-intolerant varieties of foxtail millet at the booting stage was...

Table S1.xlsx from Transcriptome analysis and mining of genes related to shade tolerance in foxtail millet (Setaria italica (L.) P. Beauv.)

Dan Liu, Yanjiao Cui, Zilong Zhao, Jing Zhang, Suying Li & Zhengli Liu
A stereo interplanting system with foxtail millet beneath chestnut trees is an effective planting method to raise the utilization of land in chestnut orchards, increase yields and improve quality of chestnut nuts. Consequently, exploration of genes involved in shade tolerance response in foxtail millet and breeding shade-tolerant varieties have become urgent issues. In this study, RNA-seq of leaf samples from two shade-tolerant varieties and three shade-intolerant varieties of foxtail millet at the booting stage was...

Table S10.xlsx from Transcriptome analysis and mining of genes related to shade tolerance in foxtail millet (Setaria italica (L.) P. Beauv.)

Dan Liu, Yanjiao Cui, Zilong Zhao, Jing Zhang, Suying Li & Zhengli Liu
A stereo interplanting system with foxtail millet beneath chestnut trees is an effective planting method to raise the utilization of land in chestnut orchards, increase yields and improve quality of chestnut nuts. Consequently, exploration of genes involved in shade tolerance response in foxtail millet and breeding shade-tolerant varieties have become urgent issues. In this study, RNA-seq of leaf samples from two shade-tolerant varieties and three shade-intolerant varieties of foxtail millet at the booting stage was...

Microstructure evolution and mechanical properties of CNT/Al composite joints via friction stir welding

Xiaopeng Li, Zeyu Zhang, Yong Wang, Yong Peng, Dejun Yan, Zhanqiu Tan, Qi Zhou & Kehong Wang
The traditional fusion welding of carbon nanotubes (CNTs) reinforcement aluminium matrix composites has serious welding defects due to the violent interfacial reaction and the brittle secondary phase. In this paper, friction stir welding (FSW), a solid-phase welding technique, was applied to join the CNT/Al matrix composites. The result shows that the tensile strength of the FSW joint fabricated at 800 rev min–1 and 100 mm min–1 is 511 MPa, reaching 92.1% of the CNT/Al composites....

Numerical investigation of asymmetric weld fusion geometry in laser welding of aluminium alloy with beam oscillation

Xi Chen, Nan Jiang, Meng Jiang, Yang Du, Shengchong Ma, Yuan Chen, Caiwang Tan, Zhenglong Lei, Sicong Zhao & Yanbin Chen
In this work, the asymmetric weld fusion geometry in oscillating laser beam welding (OLBW) of aluminium alloy was reported and investigated using a numerical approach. A multi-physics heat transfer and fluid flow model of OLBW was developed and validated with the corresponding experimental results. The weld fusion geometry, temperature fields, and fluid flow behaviours for four commonly used oscillation modes, line, circle, eight, and infinity, were calculated to analyse the origin of the asymmetric weld...

Additional file 1 of SPARC plays an important role in the oviposition and nymphal development in Nilaparvata lugens Stål

Weixia Wang, Tingheng Zhu, Pinjun Wan, Qi Wei, Jiachun He, Fengxiang Lai & Qiang Fu
Additional file 1: Table S1. Information of protein sequences used in alignment.

The perception of people with chronic kidney disease towards exercise and physical activity: a literature review

Jing Zhang & Paul Bennett
The perception of people with chronic kidney disease towards exercise and physical activity: a literature review

Additional file 1 of 3D-printed hemipelvic prosthesis combined with a dual mobility bearing in patients with primary malignant neoplasm involving the acetabulum: clinical outcomes and finite element analysis

Miao Wang, Tianze Liu, Changli Xu, Chang Liu, Bo Li, Qiujian Lian, Tongjiang Chen, Suchi Qiao & Zhiwei Wang
Additional file 1: Figure S1. The figure file shows the proceeding of soft tissue reconstruction in more detail.

A simplified multiplex methylated DNA testing for early detection of colorectal cancer in stool DNA

Yanmiao Dai, Guodong Zhao, Jun Yang, Xilang Zhou, Shangmin Xiong, Xirong Lu, Liming Gao, Jianfang Wu, Zouhua Xu, Sujuan Fei, Minxue Zheng & Hongwei Xu
Abstract Background ColoDefense1.0 assay has demonstrated its excellent sensitivity and specificity for early detection of colorectal cancer (CRC) by detecting the methylation levels of SDC2 and SEPT9, while exhibited limitations on relatively large sample capacity required and limited detection throughput by applying triplicate PCR reactions for each sample. In this study, ColoDefense1.0 was simplified and optimized into ColoDefense2.0 in a single PCR reaction. Methods A total 529 stool specimens were collected, and 244 CRC patients,...

Diagnostic value of the microcolon using ultrasonography in small bowel atresia

Hao Ju, Shu Feng & Ying Huang
Abstract Background Microcolon helps diagnose small bowel atresia (SBA) using contrast enema. However, there are no ultrasonography (US) microcolon criteria for diagnosing SBA. Therefore, this study aimed to evaluate colon accuracy and other characteristics for diagnosing SBA by US, using surgical or clinical information as the reference standard. Methods US was performed on 46 neonates aged ≤ 7 days old. In the study group (n = 15), neonates with SBA were confirmed following surgery. In...

Diagnostic value of the microcolon using ultrasonography in small bowel atresia

Hao Ju, Shu Feng & Ying Huang
Abstract Background Microcolon helps diagnose small bowel atresia (SBA) using contrast enema. However, there are no ultrasonography (US) microcolon criteria for diagnosing SBA. Therefore, this study aimed to evaluate colon accuracy and other characteristics for diagnosing SBA by US, using surgical or clinical information as the reference standard. Methods US was performed on 46 neonates aged ≤ 7 days old. In the study group (n = 15), neonates with SBA were confirmed following surgery. In...

Additional file 1 of The bacterial consortia promote plant growth and secondary metabolite accumulation in Astragalus mongholicus under drought stress

Yixian Lin, Hui Zhang, Peirong Li, Juan Jin & Zhefei Li
Supplementary Material 1

Identification, isolation, characterization, and synthesis of impurities of pesticide spirotetramat

Zhaojie Li, Yongze Li, Xuebin Zhang, Jing Zhou & Sheng Shen
Research work featured in this article describes the impurity profile of spirotetramat, a widely used broad-spectrum pesticide targeting acetyl-CoA carboxylase. Technical grade spirotetramat from four different sources were analyzed and compared with commercial Movento using UPLC-MS. Seven potential impurities were detected and six of them except for the trans-isomer of spirotetramat were subsequently isolated using preparative HPLC. All impurities were characterized mainly by MS and NMR spectroscopy and their structures were further confirmed by chemical...

Screening of differentially expressed microRNAs and target genes in two potato varieties under nitrogen stress

Yue Lu, Jingying Zhang, Zhijun Han, Zhongcai Han, Shuang Li, Jiayue Zhang, Haoran Ma & Yuzhu Han
Abstract Background A reasonable supply of nitrogen (N) fertilizer is essential for obtaining high-quality, high-level, and stable potato yields, and an improvement in the N utilization efficiency can effectively reduce N fertilizer use. It is important to use accurate, straightforward, and efficient transgenic breeding techniques for the identification of genes that can improve nitrogen use efficiency, thus enabling us to achieve the ultimate goal of breeding N-efficient potato varieties. In recent years, some of the...

Additional file 2 of Assessment of life support skills of resident dentists using OSCE: cross-sectional survey

Fan Yang, Chen Zheng, Tianer Zhu & Denghui Zhang
Additional file 2: Table S2. OSCE criteria scores of endotracheal intubation for stage assessment in standardized training.

Additional file 3 of Assessment of life support skills of resident dentists using OSCE: cross-sectional survey

Fan Yang, Chen Zheng, Tianer Zhu & Denghui Zhang
Additional file 3: Table S3. Questionnaire on self-assess competence and willingness of CPR.

Assessment of life support skills of resident dentists using OSCE: cross-sectional survey

Fan Yang, Chen Zheng, Tianer Zhu & Denghui Zhang
Abstract Background The aim of this cross-sectional survey was to apply the Objective Structured Clinical Examination (OSCE) to evaluate the cardiopulmonary resuscitation (CPR) and endotracheal intubation skills of resident dentists for stage assessment in standardized training. Methods A total of 146 third-year resident dentists were recruited and randomly assigned to perform either CPR or endotracheal intubation. Their performance was scored by experienced anesthesiologists with standardized scoring criteria. Participants were also asked to rated their self-assessed...

Additional file 1 of Screening of differentially expressed microRNAs and target genes in two potato varieties under nitrogen stress

Yue Lu, Jingying Zhang, Zhijun Han, Zhongcai Han, Shuang Li, Jiayue Zhang, Haoran Ma & Yuzhu Han
Additional file 1: Table 1. Summarystatistics of the miRNA sequencing data of two potato varieties at the seedlingand budding stages supplied with different levels of N. Table 2. Prediction of highly expressed miRNAs. Table 3. Prediction of target genes for differentialmiRNAs. Table 4. Enrichment analysis of target genescorresponding to differential miRNAs. Table 5. URLs of the online platforms. Table 6. Details of qRT-PCR primers for miRNAs. Table 7. Primer sequences.

Additional file 1 of Effects of Chinese medicine for COVID-19 rehabilitation: a multicenter observational study

Linda Li-Dan Zhong, Yi-Ping Wong, Chor-Yin Leung, Bo Peng, Zhi-Xiu Lin, Vivian Chi-Woon Wong Taam, Yi Luo, Hai-Yong Chen, Chao-Dong Chao, Chor-Fung Wong, Freddie Shung-Chi Tam, Kui Chan, Kwan-Yiu Lee, Lai-Fun Ho, Alan Yat-Lun Wong, Chi-Fung Choy, Bacon Fung-Leung Ng, Rowena How-Wan Wong, Yi-Bin Feng, Ching Liong & Zhao-Xiang Bian
Additional file 1. Tables S1 and S2 and Appendix S1 and S2.

Additional file 1 of Temporal associations between leukocytes DNA methylation and blood lipids: a longitudinal study

Zhiyu Wu, Lu Chen, Xuanming Hong, Jiahui Si, Weihua Cao, Canqing Yu, Tao Huang, Dianjianyi Sun, Chunxiao Liao, Yuanjie Pang, Zengchang Pang, Liming Cong, Hua Wang, Xianping Wu, Yu Liu, Yu Guo, Zhengming Chen, Jun Lv, Wenjing Gao & Liming Li
Additional file 1: Table S1. Details of sample size and quality control. Figure S1. Manhattan plots of the epigenome-wide association study (Model 1). Manhattan plots for (a) triglyceride (TG), (b) total cholesterol (TC), (c) high-density lipoprotein-cholesterol (HDL-C), and (d) low-density lipoprotein-cholesterol (LDL-C) in Model 1. The red horizontal dashed lines represent the FDR-adjusted threshold of significance. Table S2. Associations between DNA methylation and lipid measures (Model 2). Table S3. Enriched GO terms based on the...

Additional file 6 of Integrated assessment of the clinical and biological value of ferroptosis-related genes in multiple myeloma

Bibo Fu, Ruonan Shao, Huizhong Wang, Guanjun Chen, Shenrui Bai & Hua Wang
Additional file 6: Figure S5. Polydatin and dicoumarol sensitized MM cell lines to doxorubicin. Cell viabilities measured by CCK8 assay after MM cell lines treated with (A) doxorubicin or doxorubicin plus 60uM polydatin; (B) doxorubicin or doxorubicin plus 30uM dicoumarol for 48h.

Bile acid distributions, sex-specificity, and prognosis in colorectal cancer

Yuping Cai, Xinyi Shen, Lingeng Lu, Hong Yan, Huang Huang, Patricia Gaule, Engjel Muca, Casey M. Theriot, Zahra Rattray, Nicholas J. W. Rattray, Jun Lu, Nita Ahuja, Yawei Zhang, Philip B. Paty, Sajid A. Khan & Caroline H. Johnson
Abstract Background Bile acids are known to be genotoxic and contribute to colorectal cancer (CRC). However, the link between CRC tumor bile acids to tumor location, patient sex, microbiome, immune-regulatory cells, and prognosis is not clear. Methods We conducted bile acid analysis using targeted liquid chromatography–mass spectrometry (LC–MS) on tumor tissues from CRC patients (n = 228) with survival analysis. We performed quantitative immunofluorescence (QIF) on tumors to examine immune cells. Results Twelve of the...

Integrated assessment of the clinical and biological value of ferroptosis-related genes in multiple myeloma

Bibo Fu, Ruonan Shao, Huizhong Wang, Guanjun Chen, Shenrui Bai & Hua Wang
Abstract Background Ferroptosis is an iron-dependent mode of cell death that could be induced by erastin and exert antitumor effects. However, the clinical and biological roles of ferroptosis-related gene (FRG) signature and the therapeutic value of erastin in multiple myeloma (MM) remained unknown. Methods Clinical and gene expression data of MM subjects were extracted from the Gene Expression Omnibus (GEO) public database. Univariable cox analysis was applied to determine FRGs related to survival and the...

Additional file 1 of Bile acid distributions, sex-specificity, and prognosis in colorectal cancer

Yuping Cai, Xinyi Shen, Lingeng Lu, Hong Yan, Huang Huang, Patricia Gaule, Engjel Muca, Casey M. Theriot, Zahra Rattray, Nicholas J. W. Rattray, Jun Lu, Nita Ahuja, Yawei Zhang, Philip B. Paty, Sajid A. Khan & Caroline H. Johnson
Additional file 1: Table S1. Names of the bile acids measured in tumor tissues. Table S2. Demographics of colon cancer patients from samples used within this study. Table S4. Comparison of bile acid abundance between RCCs and LCCs by sex and age. Table S5. Pearson correlation of glucuronic acid to bile acid abundances in patients with LCC ≥ 55 years old (n=99). Table S6. Correlations between prognosis-linked bile acid and T regulatory cell abundances in...

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