45 Works

Pervasive effects of Wolbachia on host temperature preference

Michael Hague, Chelsey Caldwell & Brandon Cooper
Heritable symbionts can modify a range of ecologically important host traits, including behavior. About half of all insect species are infected with maternally transmitted Wolbachia, a bacterial endosymbiont known to alter host reproduction, nutrient acquisition, and virus susceptibility. Here, we broadly test the hypothesis that Wolbachia modify host behavior by assessing the effects of eight different Wolbachia strains on the temperature preference of six Drosophila melanogaster-subgroup species. Four of the seven host genotypes infected with...

VTFT_Demography: global ageclass simulation data from the LPJ-wsl v2.0 Dynamic Global Vegetation Model

Leonardo Calle
Forest ecosystem processes follow classic responses with age, peaking production around canopy closure and declining thereafter. Although age dynamics might be more dominant in certain regions over others, demographic effects on net primary production (NPP) and heterotrophic respiration (Rh) are bound to exist. Yet, explicit representation of ecosystem demography is notably absent in most global ecosystem models. This is concerning because the global community relies on these models to regularly update our collective understanding of...

Multi-scale habitat assessment of pronghorn migration routes

Andrew Jakes, Nicholas DeCesare, Paul Jones, C Cormack Gates, Scott Story, Sarah Olimb, Kyran Kunkel & Mark Hebblewhite
We studied the habitat selection of pronghorn (Antilocapra americana) during seasonal migration; an important period in an animal’s annual cycle associated with broad-scale movements. We further decompose our understanding of migration habitat itself as the product of both broad- and fine-scale behavioral decisions and take a multi-scale approach to assess pronghorn spring and fall migration across the transboundary Northern Sagebrush Steppe region. We used a hierarchical habitat selection framework to assess a suite of natural...

Public opinion about management strategies for a low-profile Species across multiple jurisdictions: whitebark pine in the northern Rockies

Elizabeth Shanahan, Eric Raile, Helen Naughton, Michael Wallner & Kendall Houghton
1. As public land managers seek to adopt and implement conservation measures aimed at reversing or slowing the negative effects of climate change, they are looking to understand public opinion regarding different management strategies. 2. This study explores drivers of attitudes toward different management strategies (i.e., no management, protection, and restoration) for a low-profile but keystone tree species, the whitebark pine (Pinus albicaulis), in the Greater Yellowstone Ecosystem. Since the whitebark pine species has a...

Escape from natural enemies depends on the enemies, the invader, and competition

Jacob Lucero, Nafiseh Arab, Sebastian Meyer, Robert Pal, Rebecca A. Fletcher, Dávid Nagy, Ragan M. Callaway & Wolfgang Weisser
The enemy release hypothesis (ERH) attributes the success of some exotic plant species to reduced top-down effects of natural enemies in the non-native range relative to the native range. Many studies have tested this idea, but very few have considered the simultaneous effects of multiple kinds of enemies on more than one invasive species in both the native and non-native ranges. Here, we examined the effects of two important groups of natural enemies – insect...

Tree growth data, ISSR tree genetics data, and monotorpene concentration data relating to mountain pine beetle attacks on whitebark pine at Vipond Park, Montana, 2017-2018

Diana Six
Abstract This record contains three zip files of data. First, for the file treeGeneticISSRData, the data consists of genetic ISSR band scores. Two sets of trees were sampled for genetic analyses - large trees surviving mountain pine beetle and 'general population' trees that we just a little to small to be attacked that served as a proxy for the population without beetle selection. Second, for the file Treegrowthdata_, this dataset includes files that record tree...

Ecological traits and the spatial structure of competitive coexistence among carnivores

Pedro Monterroso, Francisco Díaz-Ruiz, Paul Lukacs, Paulo Alves & Pablo Ferreras
Competition is a widespread interaction among carnivores, ultimately manifested through one or more dimensions of the species’ ecological niche. One of the most explicit manifestations of competitive interactions regards spatial displacement. Its interpretation under a theoretical context provides an important tool to deepen our understanding of biological systems and communities, but also for wildlife management and conservation. We used Bayesian multi-species occupancy models on camera trapping data from multiple sites in Southwestern Europe (SWE) to...

Climate influences the value of a plant structural defence against browsing

Christopher H. Lusk, Susan K. Wiser & Daniel C. Laughlin
The circumstances that select for plant anti-herbivore defences are not well understood. In New Zealand, the “divaricate” cage-like architecture of many woody plants may have arisen as a defence against avian browsing; it also has some ability to deter browsing by introduced deer. Its prominence on alluvial soils in frosty and droughty areas led us to hypothesize that structural defences are of most value where fertile soils coincide with climatic constraints that prevent plants from...

The legacy of recurrent introgression during the radiation of hares

Mafalda S. Ferreira, Matthew R. Jones, Colin M. Callahan, Liliana Farelo, Zelalem Tolesa, Franz Suchentrunk, Pierre Boursot, L. Scott Mills, Paulo C. Alves, Jeffrey M. Good & José Melo-Ferreira
Hybridization may often be an important source of adaptive variation, but the extent and long-term impacts of introgression have seldom been evaluated in the phylogenetic context of a radiation. Hares (Lepus) represent a widespread mammalian radiation of 32 extant species characterized by striking ecological adaptations and recurrent admixture. To understand the relevance of introgressive hybridization during the diversification of Lepus, we analyzed whole exome sequences (61.7 Mb) from 15 species of hares (1- 4 individuals...

Data from: Positive associations with native shrubs are intense and important for an exotic invader but not the native annual community across an aridity gradient

Jacob Lucero, Merav Seifan, Ragan Callaway & Christopher Lortie
AIM AND LOCATION: Positive interactions influence the assembly of plant communities globally, particularly in stressful environments like deserts. However, few studies have measured the intensity and relative importance of positive interactions involving native and invasive species along aridity gradients. These measures are essential for predicting how dryland communities will respond to biological invasions and environmental change. Here, we measured the intensity and importance of positive associations formed between native shrubs and the annual plant community,...

Trade-offs between seed size and biotic interactions contribute to coexistence of co-occurring species that vary in fecundity

John Maron, Philip Hahn, Kayrn Hajek & Dean Pearson
Despite theoretical advances, the ecological factors and functional traits that enable species varying in seed size and fecundity to coexist remain unclear. Given inherent fecundity advantages, why don’t small-seeded species dominate communities? In perennial grasslands, we evaluated whether small-seeded species are less tolerant of competition from the community dominant bunchgrass than large-seeded species but also less vulnerable to seed predation by mice. We also explored whether trade-offs involving competitive tolerance include two other functional traits,...

Data from: An annotated draft genome of the mountain hare (Lepus timidus)

João Pedro Marques, Fernando A. Seixas, Jeffrey M. Good, Liliana Farelo, Colin M. Callahan, W. Ian Montgomery, Neil Reid, Paulo C. Alves, Pierre Boursot & José Melo-Ferreira
Hares (genus Lepus) provide clear examples of repeated and often massive introgressive hybridization and striking local adaptations. Genomic studies on this group have so far relied on comparisons to the European rabbit (Oryctolagus cuniculus) reference genome. Here, we report the first de novo draft reference genome for a hare species, the mountain hare (Lepus timidus), and evaluate the efficacy of whole-genome re-sequencing analyses using the new reference versus using the rabbit reference genome. The genome...

Phylogenomic resolution of sea spider diversification through integration of multiple data classes

Jesus Ballesteros, Emily Setton, Carlos Santibáñez-López, Claudia Arango, Georg Brenneis, Saskia Brix, Kevin Corbett, Esperanza Cano-Sánchez, Merai Dandouch, Geoffrey Dilly, Marc Eleaume, Guilherme Gainett, Cyril Gallut, Sean McAtee, Lauren McIntyre, Randy Moran, Pablo López-González, Gerhard Scholtz, Clay Williamson, Arthur Woods, Jakob Zehms, Ward Wheeler & Prashant Sharma
Despite significant advances in invertebrate phylogenomics over the past decade, the higher-level phylogeny of Pycnogonida (sea spiders) remains elusive. Due to the inaccessibility of some small-bodied lineages, few phylogenetic studies have sampled all sea spider families. Previous efforts based on a handful of genes have yielded unstable tree topologies. Here, we inferred the relationships of 89 sea spider species using targeted capture of the mitochondrial genome, 56 conserved exons, 101 ultraconserved elements, and three nuclear...

Relative reproductive phenology and synchrony affect neonate survival in a nonprecocial ungulate

Eric Michel, Bronson Strickland, Stephen Demarais, Jerrold Belant, Todd Kautz, Jared Duquette, Dean Beyer, Michael Chamberlain, Karl Miller, Rebecca Shuman, John Kilgo, Duane Diefenbach, Bret Wallingford, Justin Vreeland, Steve Ditchkoff, Christopher DePerno, Christopher Moorman, Michael Chitwood & Marcus Lashley
1. Degree of reproductive synchronization in prey is hypothesized as a predator defense strategy reducing prey risk via predator satiation or predator avoidance. Species with precocial young, especially those exposed to specialist predators, should be highly synchronous to satiate predators (predator satiation hypothesis), while prey with nonprecocial (i.e., altricial) young, especially those exposed to generalist predators, should become relatively asynchronous to avoid predator detection (predator avoidance hypothesis). The white-tailed deer (Odocoileus virginianus) in North America...

Data from: Snow-mediated plasticity does not prevent camouflage mismatch

Alexander Kumar, Marketa Zimova, James Sparks & L Scott Mills
Global reduction in snow cover duration is one of the most consistent and widespread climate change outcomes. Declining snow duration has severe negative consequences for diverse taxa including seasonally color molting species, which rely on snow for camouflage. However, phenotypic plasticity may facilitate adaptation to reduced snow duration. Plastic responses could occur in the color molt phenology or through behavior that minimizes coat color mismatch or its consequences. We quantified molt phenology of 200 wild...

Data from: Riparian habitat restoration increases the availability and occupancy of Yellow-breasted Chat territories but brood parasitism is the primary influence on reproductive performance

Timothy Robert Forrester, David J. Green, René McKibbin, A. Michael Bezener & Christine A. Bishop
Implementation and evaluation of conservation efforts requires an understanding of the habitat selection and reproductive success of endangered populations. As populations recover, established territory holders may force new arrivals into lower-quality habitat, which can reduce reproductive success, especially in disturbed landscapes where suitable habitat is scarce. The endangered Western Yellow-breasted Chat (Icteria virens auricollis) population in the fragmented riparian zone of the Okanagan Valley, British Columbia, Canada, has rapidly increased in response to habitat restoration....

Data from: Developing a Stopover-CORT hypothesis: corticosterone predicts body composition and refueling rate in Gray Catbirds during migratory stopover

Joely DeSimone, Mariamar Gutierrez Ramirez, Cory Elowe, Michael Griego, Creagh Breuner & Alexander Gerson
Migratory flight is energetically challenging, requiring alternating phases of fuel catabolism and fuel accumulation, accompanied by dramatic changes in body composition and behavior. Baseline corticosterone (CORT; the primary glucocorticoid in birds) is thought to underlie transitions between fuel catabolism during flight, fuel deposition during stopover, and the initiation of migratory flight. However, studies of CORT on stopover physiology and behavior remain disparate efforts, lacking the cohesion of a general hypothesis. Here we develop a Stopover-CORT...

Data from: Species-specific variation in germination rates contributes to spatial coexistence more than adult plant water use in four closely-related annual flowering plants

Aubrie James, Timothy Burnette, Jasmine Mack, David James, Vince Eckhart & Monica Geber
1. Spatial partitioning is a classic hypothesis to explain plant species coexistence, but evidence linking local environmental variation to spatial sorting, demography, and species’ traits is sparse. If co-occurring species’ performance is optimized differently along environmental gradients because of trait variation, then spatial variation might facilitate coexistence. 2. We used a system of four naturally co-occurring species of Clarkia (Onagraceae) to ask if distribution patchiness corresponds to variation in two environmental variables that contribute to...

Sex linkage of the skeletal muscle sodium channel gene (SCN4A) explains apparent deviations from Hardy–Weinberg equilibrium of tetrodotoxin-resistance alleles in garter snakes (Thamnophis sirtalis)

Kerry Gendreau, Michael Hague, Chris Feldman, , & Joel McGlothlin
The arms race between tetrodotoxin-bearing Pacific newts (Taricha) and their garter snake predators (Thamnophis) in western North America has become a classic example of coevolution, shedding light on predator-prey dynamics, the molecular basis of adaptation, and patterns of convergent evolution. Newts are defended by tetrodotoxin (TTX), a neurotoxin that binds to voltage-gated sodium channels (Nav proteins), arresting electrical activity in nerves and muscles and paralyzing would-be predators. However, populations of the common garter snake (T....

Genomic population structure of striped bass (Morone saxatilis) from the Gulf of St. Lawrence to Cape Fear River

Nathalie LeBlanc, Benjamin Gahagan, Samuel Andrews, Trevor Avery, Gregory Puncher, Benjamin Reading, Colin Buhariwalla, R Allen Curry, Andrew Whitely & Scott Pavey
Striped Bass, Morone saxatilis (Walbaum, 1792), is an anadromous fish species that supports fisheries throughout North America and is native to the North American Atlantic Coast. Due to long coastal migrations that span multiple jurisdictions, a detailed understanding of population genomics is required to untangle demographic patterns, understand local adaptation, and characterize population movements. This study used 1256 single nucleotide polymorphism (SNP) loci to investigate genetic structure of 477 Striped Bass sampled from 15 locations...

Data from: A phylogeny for the Drosophila montium species group: a model clade for comparative analyses

William Conner, Emily Delaney, Michael Bronski, Paul Ginsberg, Timothy Wheeler, Kelly Richardson, Brooke Peckenpaugh, Kevin Kim, Masayoshi Watada, Ary Hoffmann, Michael Eisen, Artyom Kopp, Brandon Cooper & Michael Turelli
The Drosophila montium species group is a clade of 94 named species closely related to the model D. melanogaster species group. The montium species group is distributed over a broad geographic range throughout Asia, Africa, and Australasia. Species of this group possess a wide range of morphologies, mating behaviors, and endosymbiont associations, making this clade useful for comparative analyses. We use genomic data from 42 available species to estimate the phylogeny and relative divergence times...

How climate impacts the composition of wolf killed-elk in northern Yellowstone National Park

Christopher Wilmers, Matthew Metz, Daniel Stahler, Michel Kohl, Chris Geremia & Douglas Smith
1. While the functional response of predators is commonly measured, recent work has revealed that the age and sex composition of prey killed is often a better predictor of prey population dynamics because the reproductive value of adult females is usually higher than that of males or juveniles. 2. Climate is often an important mediating factor in determining the composition of predator kills, but we currently lack a mechanistic understanding of how the multiple facets...

Data from: Arctic and boreal paleofire records reveal drivers of fire activity and departures from Holocene variability

Tyler Hoecker, Philip Higuera, Ryan Kelly & Feng Sheng Hu
Boreal forest and tundra biomes are key components of the Earth system because the mobilization of large carbon stocks and changes in energy balance could act as positive feedbacks to ongoing climate change. In Alaska, wildfire is a primary driver of ecosystem structure and function, and a key mechanism coupling high-latitude ecosystems to global climate. Paleoecological records reveal sensitivity of fire regimes to climatic and vegetation change over centennial-millennial time scales, highlighting increased burning concurrent...

Evolutionary divergence of potential drought adaptations between two subspecies of an annual plant: Are trait combinations facilitated, independent, or constrained?

Vincent Eckhart & Timothy Burnette
Premise: Whether drought-adaptation mechanisms tend to evolve together, evolve independently, and/or evolve constrained by genetic architecture is incompletely resolved, particularly for water relations traits besides gas exchange. We addressed this issue in two subspecies of Clarkia xantiana (Onagraceae), California winter annuals that separated approximately 65,000 years ago and are adapted, partly by differences in flowering time, to native ranges differing in precipitation. Methods: In these subspecies and in recombinant inbred lines (RILs) from a cross...

Life history predicts flight muscle phenotype and function in birds

Shane DuBay, Yongjie Wu, Graham Scott, Yanhua Qu, Qiao Liu, Joel Smith, Chao Xin, Andrew Hart Reeve, Chen Juncheng, Dylan Meyer, Jing Wang, Jacob Johnson, Zachary Cheviron, Fumin Lei & John Bates
1. Functional traits are the essential phenotypes that underlie an organism’s life history and ecology. Although biologists have long recognized that intraspecific variation is consequential to an animals’ ecology, studies of functional variation are often restricted to species-level comparisons, ignoring critical variation within species. In birds, interspecific comparisons have been foundational in connecting flight muscle phenotypes to species-level ecology, but intraspecific variation has remained largely unexplored. 2. We asked how age- and sex-dependent demands on...

Registration Year

  • 2020

Resource Types

  • Dataset


  • University of Montana
  • United States Department of Agriculture
  • Utah State University
  • University of Georgia
  • University of Virginia
  • University of Alberta
  • University of Nevada Reno
  • University of Wisconsin-Madison
  • McMaster University
  • University of Porto