152 Works
MicroRNA-624-mediated ARRDC3/YAP/HIF1α axis enhances esophageal squamous cell carcinoma cell resistance to cisplatin and paclitaxel
Jie Yan, Litong Shi, Shan Lin & Yi Li
Development of chemoresistance remains a major challenge in treating patients suffering from esophageal squamous cell carcinoma (ESCC), despite treatment advances. MicroRNAs (miRNAs) have been shown to play critical roles in the regulation of ESCC cell chemoresistance. Here, we aimed to investigate the role of miR-624 in ESCC and its molecular mechanism in mediating the resistance of ESCC cells to two common chemotherapeutic drugs, cisplatin (CIS) and paclitaxel (PT). Expression patterns of miR-624, arrestin domain-containing 3...
Orientin mediates protection against MRSA-induced pneumonia by inhibiting Sortase A
Li Wang, Shisong Jing, Han Qu, Kai Wang, Yajing Jin, Ying Ding, Lin Yang, Hangqian Yu, Yan Shi, Qianxue Li & Dacheng Wang
Drug-resistant pathogenic Staphylococcus aureus (S. aureus) has severely threatened human health and arouses widespread concern. Sortase A (SrtA) is an essential virulence factor of S. aureus, which is responsible for the covalent anchoring of a variety of virulence-related proteins to the cell wall. SrtA has always been regarded as an ideal pharmacological target against S. aureus infections. In this research, we have determined that orientin, a natural compound isolated from various medicinal plants, can effectively...
An application of waste algae biochar in aquaculture water to remove co-existed cadmium and PAHs and the corresponding mechanism
Qian Wang, Li Zhang, Yiqin Chen, Jie Yin & Juan-ying Li
Water quality in aquaculture farms is highly related to the quality of aquaculture products and the connected environment. Cadmium (Cd2+) and polycyclic aromatic hydrocarbons (PAHs) are two of the most common pollutants in the aquaculture water, while biochar derived from waste algae (Enteromorpha prolifera), namely BE, was applied in farms ponds to improve water quality. Firstly, the adverse environmental impact of BE was minor, while the concentrations of the heavy metal (Cd2+ in the present...
Adsorption of Rhodamine B from an aqueous solution by acrylic-acid-modified walnut shells: characterization, kinetics, and thermodynamics
Xianzhe Guo, Zhuozhuang Liu, Zhiming Tong, Nan Jiang & Wu Chen
A batch experiment was used in studying the effect of acrylic-acid-modified walnut shell (MWNS) as a low-cost adsorbent for removing Rhodamine B (RB) cationic dye in aqueous solutions. The adsorbent dosage, initial dye concentration, contact time, temperature, pH, and supporting electrolyte concentration on the adsorption behaviour of the adsorbent were explored. The adsorbent was characterized using the point of zero charge (pHPZC), Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy (SEM), automatic specific surface analysis...
Inference for High-Dimensional Censored Quantile Regression
Zhe Fei, Qi Zheng, Hyokyoung G. Hong & Yi Li
With the availability of high-dimensional genetic biomarkers, it is of interest to identify heterogeneous effects of these predictors on patients’ survival, along with proper statistical inference. Censored quantile regression has emerged as a powerful tool for detecting heterogeneous effects of covariates on survival outcomes. To our knowledge, there is little work available to draw inferences on the effects of high-dimensional predictors for censored quantile regression (CQR). This article proposes a novel procedure to draw inference...
An application of waste algae biochar in aquaculture water to remove co-existed cadmium and PAHs and the corresponding mechanism
Qian Wang, Li Zhang, Yiqin Chen, Jie Yin & Juan-ying Li
Water quality in aquaculture farms is highly related to the quality of aquaculture products and the connected environment. Cadmium (Cd2+) and polycyclic aromatic hydrocarbons (PAHs) are two of the most common pollutants in the aquaculture water, while biochar derived from waste algae (Enteromorpha prolifera), namely BE, was applied in farms ponds to improve water quality. Firstly, the adverse environmental impact of BE was minor, while the concentrations of the heavy metal (Cd2+ in the present...
Triassic igneous activities in the east flank of the East Kunlun orogenic belt: the Daheba complex example
Nan Tian, Feng-Yue Sun, Zhong-Cui Pan, Liang Li, Yan Gu, Dong-Qian Wu, Jia-Fang Deng, Zhe-Dong Liu, Li Wang & Ya-Jing Zhang
The Triassic igneous complexes in the east flank of the East Kunlun orogenic belt (E-KOB) provide a window through which to investigate the Mesozoic magmatism in the E-KOB. Here, we report the precise timing of Triassic magmatism and magma petrogenesis of different rock types in the east flank of the E-KOB based on the petrology, mineral chemistry, geochemistry, zircon geochronology and Lu-Hf isotopes. Zircon U-Pb dating reveals that the Daheba complex was crystallized in 242–239...
Four new secoiridoids from the stem barks of Syringa reticulata (Bl.) Hara
Shuang Guo, Yan Liu, Yan-Ping Sun, Juan Pan, Wei Guan, Xiao-Mao Li, Si-Yi Wang, Adnan Mohammed Algradi, Bing-You Yang & Hai-Xue Kuang
Four new secoiridoids, syrretoside A (1), syrretoside B (2), 5β, 8β-syrretaglucone C(3), 5β, 8α-syrretaglucone C (4), together with eight known secoiridoids (5–12), were isolated from the stem barks of Syringa reticulata (Bl.) Hara. The structures of isolated compounds were established based on the physical and chemical means, NMR spectroscopy, high-resolution mass spectrometry (HR-ESI-MS), and circular dichroism spectrum (CD), as well as in comparison with the literature. The cytotoxicity of isolated compounds was investigated using CCK8...
Long non-coding RNA RP11-283G6.5 confines breast cancer development through modulating miR-188-3p/TMED3/Wnt/β-catenin signalling
Jing Pei, Shengquan Zhang, Xiaowei Yang, Chunguang Han, Yubo Pan, Jun Li, Zhaorui Wang, Chenyu Sun & Jing Zhang
The contributions of long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) to breast cancer are critical areas of investigation. In this study, we identified a novel lncRNA RP11-283G6.5 which was lowly expressed in breast cancer and whose low expression was correlated with poor overall survival and disease-free survival of breast cancer patients. Functional experiments revealed that ectopic expression of RP11-283G6.5 confined breast cancer cellular growth, migration, and invasion, and promoted cellular apoptosis. Conversely, RP11-283G6.5 silencing facilitated...
Quantifying stranded assets of the coal-fired power in China under the Paris Agreement target
Weirong Zhang, Yiou Zhou, Zhen Gong, Junjie Kang, Changhong Zhao, Zhixu Meng, Jian Zhang, Tao Zhang & Jiahai Yuan
Coal-fired power plays a critical role in China’s compliance with the Paris Agreement. This research quantifies China’s stranded coal assets under different coal capacity expansion scenarios with an integrated approach and high-precision coal-fired power database. From a top-down perspective, firstly, the pathway of China’s coal-fired power capacity consistent with the global 2°C scenario is outlined and then those stranded coal-fired power plants are identified with a bottom-up perspective. Stranded value is estimated based upon a...
Quantitative proteomics reveals that dormancy-related proteins mediate the attenuation in mycobacterium strains
Hong Wang, Li Wan, Jiahui Shi, Tao Zhang, Huiming Zhu, Songhao Jiang, Shuhong Meng, Shujia Wu, Jinshuai Sun, Lei Chang, Liqun Zhang, Kanglin Wan, Jiaqi Yang, Xiuqin Zhao, Haican Liu, Yao Zhang, Erhei Dai & Ping Xu
Although members of the Mycobacterium tuberculosis complex (MTBC) exhibit high similarity, they are characterized by differences with respect to virulence, immune response, and transmissibility. To understand the virulence of these bacteria and identify potential novel therapeutic targets, we systemically investigated the total cell protein contents of virulent H37Rv, attenuated H37Ra, and avirulent M. bovis BCG vaccine strains at the log and stationary phases, based on tandem mass tag (TMT) quantitative proteomics. Data analysis revealed that...
Identification of microRNA hsa-miR-30c-5p as an inhibitory factor in the progression of hepatocellular carcinoma and investigation of its regulatory network via comprehensive analysis
Shangshang Hu, Jinyan Zhang, Xiaoyu Fang, Guoqing Guo, Jing Dai, Zhiyong Sheng, Dongdong Li, Jiasheng Chen, Li Zhang, Chuanmiao Liu & Yu Gao
Hepatocellular carcinoma (HCC) is a primary liver cancer with high morbidity and mortality. An increasing number of abnormal gene expressions were identified to be associated with the progression of HCC. Previous studies showed that the hsa-miR-30 c-5p (miR-30 c), one of the miR-30 family members, might play a role in suppressing tumor progression in a variety of tumors. The present study aims to examine miR-30 c effects in the development of HCC. The role of...
A new diterpenoid alkaloid from Delphinium gyalanum C. Marquand & Airy Shaw
Xinyu Li, Meizhen Ye, Feng Gao, Xianli Zhou, Lin Chen & Shuai Huang
A new C19-diterpenoid alkaloid named gyalanutine A (1) and fourteen known compounds 2-15 were isolated from the plant of Delphinium gyalanum C. Marquand & Airy Shaw. Compound 1 displayed an unusual lycoctonine-type C19-diterpenoid alkaloid skeleton with the cleavage of N-C19 and C7-C17 bonds, and the construction of the N-C7 bond. Structures were identified by multiple spectroscopic analyses including 1 D, 2 D NMR, IR and HR-ESI-MS. Compounds were tested for acetylcholinesterase inhibitory and anti-inflammatory activity.
Additional file 3 of Temporal expression study of miRNAs in the crown tissues of winter wheat grown under natural growth conditions
Menglei Wang, Chenhui Yang, Kangning Wei, Miao Zhao, Liqiang Shen, Jie Ji, Li Wang, Daijing Zhang, Junqiang Guo, Yun Zheng, Juanjuan Yu, Mo Zhu, Haiying Liu & Yong-Fang Li
Additional file 3: Table S2. Expression of wheat new miRNAs in crown tissues.
Additional file 5 of Temporal expression study of miRNAs in the crown tissues of winter wheat grown under natural growth conditions
Menglei Wang, Chenhui Yang, Kangning Wei, Miao Zhao, Liqiang Shen, Jie Ji, Li Wang, Daijing Zhang, Junqiang Guo, Yun Zheng, Juanjuan Yu, Mo Zhu, Haiying Liu & Yong-Fang Li
Additional file 5: Table S4. Expression of differentially expressed miRNAs in wheat crown tissues.
Additional file 5 of Temporal expression study of miRNAs in the crown tissues of winter wheat grown under natural growth conditions
Menglei Wang, Chenhui Yang, Kangning Wei, Miao Zhao, Liqiang Shen, Jie Ji, Li Wang, Daijing Zhang, Junqiang Guo, Yun Zheng, Juanjuan Yu, Mo Zhu, Haiying Liu & Yong-Fang Li
Additional file 5: Table S4. Expression of differentially expressed miRNAs in wheat crown tissues.
Additional file 6 of Temporal expression study of miRNAs in the crown tissues of winter wheat grown under natural growth conditions
Menglei Wang, Chenhui Yang, Kangning Wei, Miao Zhao, Liqiang Shen, Jie Ji, Li Wang, Daijing Zhang, Junqiang Guo, Yun Zheng, Juanjuan Yu, Mo Zhu, Haiying Liu & Yong-Fang Li
Additional file 6: Figure S2. miRNAs with similar expression patterns in crown and leaf tissues at the winter dormancy stage, spring green-up stage and jointing stage.
Kinetics of SARS-CoV-2 specific IgM and IgG responses in COVID-19 patients
Baoqing Sun, Ying Feng, Xiaoneng Mo, Peiyan Zheng, Qian Wang, Pingchao Li, Ping Peng, Xiaoqing Liu, Zhilong Chen, Huimin Huang, Fan Zhang, Wenting Luo, Xuefeng Niu, Peiyu Hu, Longyu Wang, Hui Peng, Zhifeng Huang, Liqiang Feng, Feng Li, Fuchun Zhang, Fang Li, Nanshan Zhong & Ling Chen
The emerging COVID-19 caused by SARS-CoV-2 infection poses severe challenges to global public health. Serum antibody testing is becoming one of the critical methods for the diagnosis of COVID-19 patients. We investigated IgM and IgG responses against SARS-CoV-2 nucleocapsid (N) and spike (S) protein after symptom onset in the intensive care unit (ICU) and non-ICU patients. 130 blood samples from 38 COVID-19 patients were collected. The levels of IgM and IgG specific to N and...
Uncovering antiobesity-related hypertension targets and mechanisms of metformin, an antidiabetic medication
Lu Yang, Jianxin Yang, Xiao Liang, Wenjun Huang, Xiaoxi Zhang & Rong Li
Metformin, a common clinical drug used to treat diabetes mellitus, is found with potential antiobese actions as reported in increasing evidences. However, the detailed mechanisms of metformin-antiobesity-related hypertension remain unrevealed. We have utilized the bioinformatics strategy, including network pharmacology and molecular docking analyses, to uncover pharmacological targets and molecular pathways of bioactive compounds against clinical disorders, such as cancers, coronavirus disease 2019. In this report, the in-silico approaches using network pharmacology and molecular docking was...
Elevated Ras related GTP binding B (RRAGB) expression predicts poor overall survival and constructs a prognostic nomogram for colon adenocarcinoma
Jianjia Xiao, Qingqing Liu, Weijie Wu, Ying Yuan, Jie Zhou, Jieyu Shi & Shaorong Zhou
Currently, no articles have explored the roles of RRAGB gene in the occurrence and development of cancer. By means of The Cancer Genome Atlas (TCGA) data mining, we found that this gene might be a novel prognostic predictor for colon adenocarcinoma (COAD). Hence, this article was carried out to explore its roles in COAD and associations with immunity. RRAGB single-gene expression matrix and corresponding clinical information were extracted from TCGA database. Univariate/multivariate cox regression analyses...
Prevalence and predictors of post-traumatic stress disorder in patients with cured coronavirus disease 2019 (COVID-19) one month post-discharge
Yumeng Ju, Jin Liu, Roger M. K. Ng, Bangshan Liu, Mi Wang, Wentao Chen, Mei Huang, Aiping Yang, Kongliang Shu, Yun Zhou, Li Zhang, Mei Liao, Jiyang Liu & Yan Zhang
Background: Coronavirus disease 2019 (COVID-19) can place an immense psychological strain on the infected patient. The psychological distress can linger after the initial recovery from the infection. Objective: This study aimed to evaluate the prevalence and predictors of provisional post-traumatic stress disorder (PTSD) in patients with cured COVID-2019. Methods: The baseline survey was conducted from 10 to 25 February 2020 in patients with COVID-19 in a designated hospital. Demographic and clinical characteristics were acquired, and...
Etomidate ameliorated advanced glycation end-products (AGEs)-induced reduction of extracellular matrix genes expression in chondrocytes
Xiaohua Sun, Jizheng Zhang, Yi Li, Wanlu Ren & Lijun Wang
Osteoarthritis (OA) is a rheumatic disease common in the elderly. AGEs are the end products of glycation reactions and play an important role in the development of OA. Etomidate is a general anesthesia-inducing agent recently reported to exert significant anti-inflammatory effects. The present study aims to explore the protective effect of Etomidate against advanced glycation end-products (AGEs)-induced reduction of extracellular matrix gene expression in chondrocytes. In the present study, we found that AGEs significantly reduced...
Immune implication of FAM83D gene in hepatocellular carcinoma
Tao Meng, Zhong Tong, Ming-Ya Yang, Yan Zhang, Yu Liu, Zhen-Zhen Wang, Li-Xin Zhu & Jin Wu
FAM83D has been demonstrated to contribute to tumorigenesis. However, its immune effects in hepatocellular carcinoma (HCC) have not been reported. This study aimed to identify the immune role of FAM83D in HCC. FAM83D was over-expressed in HCC and contributed to poor prognosis according to the results of data analysis based on The Cancer Genome Atlas (TCGA). Afterward, the levels of immune cells infiltration were found to be correlated with the expression level of FAM83D in...
Developmental validation of the novel six-dye GoldeneyeTM DNA ID System 35InDel kit for forensic application
Qi Yang, Huan Yu, Yiling Qu, Xiaochun Zhang, Ruocheng Xia, Ziwei Wang, Rui Tan, Lei Xiong, Shihan Xi, Jun Wu, Yuzhen Gao, Suhua Zhang & Chengtao Li
Insertion/deletion polymorphisms (InDels) have been treated as a prospective and helpful genetic marker in the fields of forensic human identification, anthropology and population genetics for the past few years. In this study, we developed a six-dye multiplex typing system consisting of 34 autosomal InDels and Amelogenin for forensic application. The contained InDels were specifically selected for Chinese population with the MAF ≥ 0.25 in East Asia, which do not overlap with the markers of Investigator®...
Additional file 1 of Temporal expression study of miRNAs in the crown tissues of winter wheat grown under natural growth conditions
Menglei Wang, Chenhui Yang, Kangning Wei, Miao Zhao, Liqiang Shen, Jie Ji, Li Wang, Daijing Zhang, Junqiang Guo, Yun Zheng, Juanjuan Yu, Mo Zhu, Haiying Liu & Yong-Fang Li
Additional file 1: Table S1. Expression of known miRNAs identified in wheat crown tissues.
Affiliations
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Southwest Medical University152
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Chinese Academy of Medical Sciences & Peking Union Medical College121
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Huazhong University of Science and Technology109
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Sun Yat-sen University107
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Shanghai Jiao Tong University105
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Chinese Academy of Sciences105
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Sichuan University104
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Fudan University104
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Zhejiang University102
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Peking University93