15 Works

Data from: Moving in the Anthropocene: global reductions in terrestrial mammalian movements

Marlee A. Tucker, Katrin Böhning-Gaese, William F. Fagan, John M. Fryxell, Bram Van Moorter, Susan C. Alberts, Abdullahi H. Ali, Andrew M. Allen, Nina Attias, Tal Avgar, Hattie Bartlam-Brooks, Buuveibaatar Bayarbaatar, Jerrold L. Belant, Alessandra Bertassoni, Dean Beyer, Laura Bidner, Floris M. Van Beest, Stephen Blake, Niels Blaum, Chloe Bracis, Danielle Brown, P. J. Nico De Bruyn, Francesca Cagnacci, Justin M. Calabrese, Constança Camilo-Alves … & Thomas Mueller
Animal movement is fundamental for ecosystem functioning and species survival, yet the effects of the anthropogenic footprint on animal movements have not been estimated across species. Using a unique GPS-tracking database of 803 individuals across 57 species, we found that movements of mammals in areas with a comparatively high human footprint were on average one-half to one-third the extent of their movements in areas with a low human footprint. We attribute this reduction to behavioral...

Data from: Female American black bears do not alter space use or movements to reduce infanticide risk

D. Cody Norton, Jerrold L. Belant, John G. Bruggink, Dean E. Beyer, Nathan J. Svoboda & Tyler R. Petroelje
Infanticide occurs in a variety of animal species and infanticide risk has large implications for the evolution of behavior. Further, the sex hypothesis of sexual segregation predicts that for species in which infanticide occurs, females with dependent young will avoid males to reduce risk of sexually-selected infanticide. Infanticide risk-avoidance behavior has been studied primarily in social species, but also occurs in some solitary species. We used generalized linear mixed models to determine if space use...

Data from: Is barotrauma an important factor in the discard mortality of yellow perch?

Carey T. Knight, Richard T. Kraus, Demetra A. Panos, Ann Marie Gorman, Benjamin S. Leonhardt, Jason Robinson & Michael Thomas
In physoclistous fishes, barotrauma caused by rapid decompression during capture may be an important source of fishing mortality that is unquantified for some fisheries. We developed a predictive logistic model for barotrauma incidence in Yellow Perch Perca flavescens and applied this model to Ohio's recreational and commercial fisheries in Lake Erie where discard mortality is implicitly considered to be negligible in current stock assessment. As expected, most of the variation in incidence was explained by...

Data from: A comprehensive analysis of autocorrelation and bias in home range estimation

Michael J. Noonan, Marlee A. Tucker, Christen H. Fleming, Tom S. Akre, Susan C. Alberts, Abdullahi H. Ali, Jeanne Altmann, Pamela C. Antunes, Jerrold L. Belant, Dean Beyer, Niels Blaum, Katrin Böhning-Gaese, , Rogerio De Paula Cunha, Jasja Dekker, Jonathan Drescher-Lehman, Nina Farwig, Claudia Fichtel, Christina Fischer, Adam T. Ford, Jacob R. Goheen, René Janssen, Florian Jeltsch, Matthew Kauffman, Peter M. Kappeler … & Justin M. Calabrese
Home range estimation is routine practice in ecological research. While advances in animal tracking technology have increased our capacity to collect data to support home range analysis, these same advances have also resulted in increasingly autocorrelated data. Consequently, the question of which home range estimator to use on modern, highly autocorrelated tracking data remains open. This question is particularly relevant given that most estimators assume independently sampled data. Here, we provide a comprehensive evaluation of...

eDNA metabarcoding in lakes to quantify influences of landscape features and human activity on aquatic invasive species prevalence and fish community diversity

Lilian Pukk, Jeannette Kanefsky, Amanda Heathman, Ellen Weise, Lucas Nathan, Seth Herbst, Nicholas Sard, Kim Scribner & John Robinson
Aim: Our goal was to use eDNA metabarcoding to characterize fish community diversity, detect aquatic invasive species (AIS), and assess how measures of community (or AIS) diversity are influenced by lake physical and environmental covariates, measures of hydrological connectivity, and human accessibility. Location: Michigan, USA. Methods: eDNA samples collected from 22 lakes were sequenced using two mitochondrial gene regions (12S and 16S rRNA). Metabarcoding data were compared to traditional fisheries survey data for a subset...

Further evidence from common garden rearing experiments of heritable traits separating lean and siscowet lake charr (Salvelinus namaycusch) ecotypes

Peter Euclide, Andy Jasonowicz, Shawn Sitar, Greg Fischer & Rick Goetz
Genetic evidence of selection for complex and polygenically regulated phenotypes can easily become masked by neutral population genetic structure and phenotypic plasticity. Without direct evidence of genotype-phenotype associations it can be difficult to conclude to what degree a phenotype is heritable or a product of environment. Common garden laboratory studies control for environmental stochasticity and help to determine the mechanism that regulate traits. Here we assess lipid content, growth, weight, and length variation in full...

Data from: Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: a lake sturgeon case study in natural stream settings

Andrew O. Finley, Patrick S. Forsythe, James A. Crossman, Edward A. Baker & Kim T. Scribner
Modeling spatially explicit data provides a powerful approach to identify the effects of exogenous features associated with biological processes, including recruitment of stream fishes. However, the complex spatial and temporal dynamics of the stream and the species' reproductive and early life stage behaviors present challenges to drawing valid inference using traditional regression models. In these settings it is often difficult to ensure the spatial independence among model residuals---a key assumption that must be met to...

Data from: Coalescent models characterize sources and demographic history of recent round goby colonization of Great Lakes and inland waters

Nicholas Sard, John Robinson, Jeannette Kanefsky, Seth Herbst & Kim Scribner
The establishment and spread of aquatic invasive species is ecologically and economically harmful and a source of conservation concern internationally. Processes of species invasion have traditionally been inferred from observational data of species presence/absence and relative abundance. However, genetic-based approaches can provide valuable sources of inference. Restriction-site associated DNA sequencing was used to identify and genotype single nucleotide polymorphism (SNP) loci for Round Gobies (Neogobius melanostomus) (N=440) from 18 sampling locations in the Great Lakes...

Data from: Comparison of fish detections, community diversity, and relative abundance using environmental DNA metabarcoding and traditional gears

Nicholas M. Sard, Seth J. Herbst, Lucas Nathan, Genelle Uhrig, Jeannette Kanefsky, John D. Robinson & Kim T. Scribner
Background Detecting species at low abundance, including aquatic invasive species (AIS), is critical for making informed management decisions. Environmental DNA (eDNA) methods have become a powerful tool for rare or cryptic species detection; however, many eDNA assays offer limited utility for community‐level analyses due to their use of species‐specific (presence/absence) ‘barcodes’. Metabarcoding methods provide information on entire communities based on sequencing of all taxon‐specific barcodes within an eDNA sample. Aims Evaluate measures of fish species...

Relative reproductive phenology and synchrony affect neonate survival in a nonprecocial ungulate

Eric Michel, Bronson Strickland, Stephen Demarais, Jerrold Belant, Todd Kautz, Jared Duquette, Dean Beyer, Michael Chamberlain, Karl Miller, Rebecca Shuman, John Kilgo, Duane Diefenbach, Bret Wallingford, Justin Vreeland, Steve Ditchkoff, Christopher DePerno, Christopher Moorman, Michael Chitwood & Marcus Lashley
1. Degree of reproductive synchronization in prey is hypothesized as a predator defense strategy reducing prey risk via predator satiation or predator avoidance. Species with precocial young, especially those exposed to specialist predators, should be highly synchronous to satiate predators (predator satiation hypothesis), while prey with nonprecocial (i.e., altricial) young, especially those exposed to generalist predators, should become relatively asynchronous to avoid predator detection (predator avoidance hypothesis). The white-tailed deer (Odocoileus virginianus) in North America...

Data from: Interannual variation in effective number of breeders and estimation of effective population size in long-lived iteroparous lake sturgeon (Acipenser fulvescens)

Thuy Yen Duong, Kim T. Scribner, Patrick S. Forsythe, James A. Crossman & Edward A. Baker
Quantifying interannual variation in effective adult breeding number (Nb) and relationships between Nb, effective population size (Ne), adult census size (N) and population demographic characteristics are important to predict genetic changes in populations of conservation concern. Such relationships are rarely available for long-lived iteroparous species like lake sturgeon (Acipenser fulvescens). We estimated annual Nb and generational Ne using genotypes from 12 microsatellite loci for lake sturgeon adults (n = 796) captured during ten spawning seasons...

Data from: American marten and fisher do not segregate in space and time during winter in a mixed-forest system

Elizabeth Croose, Florent Bled, Nicholas L. Fowler, & Jerrold L. Belant
Understanding the mechanisms of coexistence between ecologically similar species is an important issue in ecology. Carnivore coexistence may be facilitated by spatial segregation, temporal avoidance, and differential habitat selection. American martens Martes americana and fishers Pekania pennanti are medium‐sized mustelids that occur sympatrically across portions of North America, yet mechanisms of coexistence between the two species are not fully understood. We assessed spatial and temporal partitioning in martens and fishers in the Upper Peninsula of...

Data from: Pairing field methods to improve inference in wildlife surveys while accommodating detection covariance

John Clare, Shawn T. McKinney, John E. DePue & Cynthia S. Loftin
It is common to use multiple field sampling methods when implementing wildlife surveys to compare method efficacy or cost-efficiency, integrate distinct pieces of information provided by separate methods, or evaluate method-specific biases and misclassification error. Existing models that combine information from multiple field methods or sampling devices permit rigorous comparison of method-specific detection parameters, enable estimation of additional parameters such as false-positive detection probability, and improve occurrence or abundance estimates, but with the assumption that...

Interference competition between wolves and coyotes during variable prey abundance

Tyler Petroelje, Jerrold Belant, Dean Beyer & Todd Kautz
Interference competition occurs when two species have similar resource requirements and one species is dominant and can suppress or exclude the subordinate species. Wolves (Canis lupus) and coyotes (C. latrans) are sympatric across much of their range in North America where white-tailed deer (Odocoileus virginianus) can be an important prey species. We assessed the extent of niche overlap between wolves and coyotes using activity, diet, and space use as evidence for interference competition during 3...

Data from: Bioregions are predominantly climatic for fishes of northern lakes

Charlie Loewen, Donald Jackson, Cindy Chu, Karen Alofs, Gretchen Hansen, Andrew Honsey, Charles Minns & Kevin Wehrly
Aim: Recurrent species assemblages integrate important biotic interactions and joint responses to environmental and spatial filters that enable local coexistence. Here, we applied a bipartite (site-species) network approach to develop a natural typology of lakes sharing distinct fish faunas and provide a detailed, hierarchical view of their bioregions. We then compared the roles of key biogeographic factors to evaluate alternative hypotheses about how fish communities are assembled from the regional species pool. Location: Ontario, Canada...

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  • Michigan Department of Natural Resources
  • Michigan State University
  • Max Planck Institute for Ornithology
  • University of Montana
  • Princeton University
  • Field Museum of Natural History
  • Duke University
  • SUNY College of Environmental Science and Forestry
  • University of Georgia
  • Senckenberg Nature Research Society