5 Works

Data from: Reconstructing Asian faunal introductions to eastern Africa from multi-proxy biomolecular and archaeological datasets

Mary E. Prendergast, Michael Buckley, Alison Crowther, Heidi Eager, Laurent Frantz, Ophélie Lebrasseur, Rainer Hutterer, Ardern Hulme-Beaman, Wim Van Neer, Katerina Douka, Margaret-Ashley Veall, Eréndira M. Quintana Morales, Verena J. Schuenemann, Ella Reiter, Richard Allen, Evangelos A. Dimopoulos, Richard M. Helm, Ceri Shipton, Ogeto Mwebi, Christiane Denys, Mark C. Horton, Stephanie Wynne-Jones, Jeffrey Fleisher, Chantal Radimilahy, Henry Wright … & Mark Horton
Human-mediated biological exchange has had global social and ecological impacts. In sub-Saharan Africa, several domestic and commensal animals were introduced from Asia in the pre-modern period; however, the timing and nature of these introductions remain contentious. One model supports introduction to the eastern African coast after the mid-first millennium CE, while another posits introduction dating back to 3000 BCE. These distinct scenarios have implications for understanding the emergence of long-distance maritime connectivity, and the ecological...

Data from: Quantifying apart what belongs together: a multi-state species distribution modeling framework for species using distinct habitats

Veronica F. Frans, Amélie A. Augé, Hendrik A. Edelhoff, Stefan Erasmi, Niko Balkenhol, Jan O. Engler & Hendrik Edelhoff
1. Species distribution models (SDMs) have been used to inform scientists and conservationists about the status and change of occurrence patterns in threatened species. Many mobile species use multiple functionally distinct habitats, and cannot occupy one habitat type without the other being within a reachable distance. For such species, classical applications of SDMs might lead to erroneous representations of habitat suitability, as the complex relationships between predictors are lost when merging occurrence information across multiple...

Data from: Plio-Pleistocene phylogeography of the Southeast Asian Blue Panchax killifish, Aplocheilus panchax

Samantha V. Beck, Gary R. Carvalho, Axel Barlow, Lukas Rüber, Heok Hui Tan, Estu Nugroho, Daisy Wowor, Siti Azizah Mohd Nor, Fabian Herder, Zainal A. Muchlisin & Mark De Bruyn
The complex climatic and geological history of Southeast Asia has shaped this region’s high biodiversity. In particular, sea level fluctuations associated with repeated glacial cycles during the Pleistocene both facilitated, and limited, connectivity between populations. In this study, we used data from two mitochondrial and three anonymous nuclear markers to determine whether a fresh/brackish water killifish, Aplocheilus panchax, Hamilton, 1822, could be used to further understand how climatic oscillations and associated sea level fluctuations have...

Data from: Influence of device accuracy and choice of algorithm for species distribution modelling of seabirds: a case study using black-browed albatrosses

Petra Quillfeldt, Jan O. Engler, Janet R. D. Silk, Richard A. Phillips & Janet R.D. Silk
Species distribution models (SDM) based on tracking data from different devices are used increasingly to explain and predict seabird distributions. However, different tracking methods provide different data resolutions, ranging from < 10m to >100km. To better understand the implications of this variation, we modeled the potential distribution of black-browed albatrosses Thalassarche melanophris from South Georgia that were simultaneously equipped with a Platform Terminal Transmitter (PTT) (high resolution) and a Global Location Sensor (GLS) logger (coarse...

Data from: Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution

Chen Wu, Melissa D. Jordan, Richard D. Newcomb, Neil J. Gemmell, Sarah Bank, Karen Meusemann, Peter K. Dearden, Elizabeth J. Duncan, Sefanie Grosser, Kim Rutherford, Paul P. Gardner, Ross N. Crowhurst, Bernd Steinwender, Leah K. Tooman, Mark I. Stevens & Thomas R. Buckley
Background: The New Zealand collembolan genus Holacanthella contains the largest species of springtails (Collembola) in the world. Using Illumina technology we have sequenced and assembled a draft genome and transcriptome from Holacanthella duospinosa (Salmon). We have used this annotated assembly to investigate the genetic basis of a range of traits critical to the evolution of the Hexapoda, the phylogenetic position of H. duospinosa and potential horizontal gene transfer events. Results: Our genome assembly was ~375...

Registration Year

  • 2017
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Resource Types

  • Dataset
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Affiliations

  • Zoological Research Museum Alexander Koenig
    5
  • University of Otago
    2
  • University of Göttingen
    2
  • Hólar University College
    1
  • National Museum
    1
  • Bangor University
    1
  • Rice University
    1
  • Ghent University
    1
  • University of Michigan-Ann Arbor
    1
  • University of Queensland
    1