892 Works

Data from: Inferring subjective states through the observation of actions

Deevia Patel, Steve M. Flemming, James M. Kilner & S. M. Fleming
Estimating another person’s subjective confidence is crucial for social interaction, but how this inference is achieved is unknown. Previous research has demonstrated that the speed at which people make decisions is correlated with their confidence in their decision. Here we show that 1) subjects’ are able to infer the subjective confidence of another person simply through the observation of their actions and 2) this inference is dependent upon the performance of each subject when executing...

Data from: Electricity and water conservation on college and university campuses in response to national competitions among dormitories: quantifying relationships between behavior, conservation strategies and psychological metrics

John E. Petersen, Cynthia M. Frantz, , Tess M. Yanisch, Evan Tincknell & Noel Myers
“Campus Conservation Nationals” (CCN) is a recurring, nation-wide electricity and water-use reduction competition among dormitories on college campuses. We conducted a two year empirical study of the competition’s effects on resource consumption and the relationship between conservation, use of web technology and various psychological measures. Significant reductions in electricity and water use occurred during the two CCN competitions examined (n = 105,000 and 197,000 participating dorm residents respectively). In 2010, overall reductions during the competition...

National School System and the Irish Language Heaney Lecture 2015

Nicholas Wolf
R scripts, codebook, data, and reproducibility file for plots used in the article "The National School System and the Irish Language in the Nineteenth Century," published as part of the 2015 Heaney Lecture Proceedings, Dublin City University/St. Patrick's College by Four Courts Press.

What makes a digital steward?: A competency profile based on the National Digital Stewardship Residencies

Karl-Rainer Blumenthal, Peggy Griesinger, Julia Kim, Shira Peltzman & Vicky Rampin

A - Z Databases Management

Andrew Battista, Alex Ducett, Stephen Balogh & Nancy Lin
This project contains all documentation, communication, data, and metadata associated with the presentation and management of A-Z databases for NYU Libraries. Definitions of components are on the project page wiki

Workshop Use Case 2: ReproZip

Vicky Rampin, Remi Rampin, Fernando Chirigati & Julie Vecchio
Use Case 2: ReproZip Breakout Session(s) held at Container Strategies for Data & Software Preservation Workshop convened by Data and Software Preservation for Open Science (DASPOS) at University of Notre Dame May 19-20, 2016.

A non-invasive, quantitative study of broadband spectral responses in human visual cortex

Jonathan Winawer, Eline Kupers, Helena Wang, Kaoru Amano, Kendrick Kay & David Heeger
Code and data in support of the manuscript, "Broadband spectral responses in visual cortex revealed by a new MEG denoising algorithm," by Eline Kupers, Helena Wang, Kaoru Amano, Kendrick Kay, David Heeger, and Jonathan Winawer

Data from: Experimental evidence that primate trichromacy is well suited for detecting primate social colour signals

Chihiro Hiramatsu, Amanda D. Melin, William L. Allen, Constance Dubuc & James P. Higham
Primate trichromatic colour vision has been hypothesized to be well tuned for detecting variation in facial coloration, which could be due to selection on either signal wavelengths or the sensitivities of the photoreceptors themselves. We provide one of the first empirical tests of this idea by asking whether, when compared with other visual systems, the information obtained through primate trichromatic vision confers an improved ability to detect the changes in facial colour that female macaque...

Creating noisy 3D shapes - an implementation using free and open source tools

Zoltan Derzsi & Robert Volcic
Distorting the shape of a three-dimensional object in a randomised manner is a very difficult task. We present a script in this paper that programmatically generates spheres with added radius noise, utilising Meshlab’s software back-end. We successfully tested the script on Mac OS, Windows, and Linux operating systems. We also have given instructions on how to set up the environment for each platform, and how to replicate what the script does manually.

Stage 2: Virome Sniff

Jose Vargas-Asencio, Roy Nunez, Rajeeva Musunuri, Michael McCormack, Patrick Hagerty, Raehash Shah & Martina Bradic

GeoBlacklight Metadata Scoring Project

Karen Majewicz & Andrew Battista
This OSF project contains all materials related to a provisional geospatial metadata scoring process.

Facebook network structure and loneliness

Riana Brown, Sam Roberts & Thomas Pollet
This is the OSF project page accompanying: Loneliness is negatively related to Facebook network size, but not related to Facebook network structure

Data from: Encephalization and longevity evolved in a correlated fashion in Euarchontoglires but not in other mammals

Alex R. DeCasien, Nicole A. Thompson, Scott A. Williams & Milena R. Shattuck
Across mammals, encephalization and longevity show a strong correlation. It is not clear, however, whether these traits evolved in a correlated fashion within mammalian orders, or when they do, whether one trait drives changes in the other. Here, we compare independent and correlated evolutionary models to identify instances of correlated evolution within six mammalian orders. In cases of correlated evolution, we subsequently examined transition patterns between small/large relative brain size and short/long lifespan. In four...

Data from: The complex geography of domestication of the African rice Oryza glaberrima

Jae Young Choi, Maricris Zaidem, Rafal Gutaker, Katherine Dorph, Rakesh Kumar Singh & Michael D. Purugganan
While the domestication history of Asian rice has been extensively studied, details of the evolution of African rice remain elusive. The inner Niger delta has been suggested as the center of origin but molecular data to support this hypothesis is lacking. Here, we present a comprehensive analysis of the evolutionary and domestication history of African rice. By analyzing whole genome re-sequencing data from 282 individuals of domesticated African rice Oryza glaberrima and its progenitor O....

2012 Machine Learning Data Set for NASA's Solar Dynamics Observatory - Atmospheric Imaging Assembly

David Fouhey, Meng Jin, Mark Cheung, Abndres Munoz-Jaramillo, Richard Galvez, Rajat Thomas, Paul Wright, Alexander Szenicer, Monica G. Bobra, Yang Liu & James Mason
We present a curated dataset from the NASA Solar Dynamics Observatory (SDO) mission in a format suitable for machine learning research. Beginning from level 1 scientific products we have processed various instrumental corrections, downsampled to manageable spatial and temporal resolutions, and synchronized observations spatially and temporally. We anticipate this curated dataset will facilitate machine learning research in heliophysics and the physical sciences generally, increasing the scientific return of the SDO mission. This work is a...

2017 Machine Learning Data Set for NASA's Solar Dynamics Observatory - Atmospheric Imaging Assembly

David Fouhey, Meng Jin, Mark Cheung, Abndres Munoz-Jaramillo, Richard Galvez, Rajat Thomas, Paul Wright, Alexander Szenicer, Monica G. Bobra, Yang Liu & James Mason
We present a curated dataset from the NASA Solar Dynamics Observatory (SDO) mission in a format suitable for machine learning research. Beginning from level 1 scientific products we have processed various instrumental corrections, downsampled to manageable spatial and temporal resolutions, and synchronized observations spatially and temporally. We anticipate this curated dataset will facilitate machine learning research in heliophysics and the physical sciences generally, increasing the scientific return of the SDO mission. This work is a...

2018 Machine Learning Data Set for NASA's Solar Dynamics Observatory - Atmospheric Imaging Assembly

David Fouhey, Meng Jin, Mark Cheung, Abndres Munoz-Jaramillo, Richard Galvez, Rajat Thomas, Paul Wright, Alexander Szenicer, Monica G. Bobra, Yang Liu & James Mason
We present a curated dataset from the NASA Solar Dynamics Observatory (SDO) mission in a format suitable for machine learning research. Beginning from level 1 scientific products we have processed various instrumental corrections, downsampled to manageable spatial and temporal resolutions, and synchronized observations spatially and temporally. We anticipate this curated dataset will facilitate machine learning research in heliophysics and the physical sciences generally, increasing the scientific return of the SDO mission. This work is a...

Data from: Health insurance coverage with or without a nurse-led task shifting strategy for hypertension control: a pragmatic cluster randomized trial in Ghana

Gbenga Ogedegbe, Jacob Plange-Rhule, Joyce Gyamfi, William Chaplin, Michael Ntim, Kingsley Apusiga, Juliet Iwelunmor, Kwasi Yeboah Awudzi, Kofi Nana Quakyi, Jazmin N. Mogavero, Kiran Khurshid, Bamidele Tayo & Richard Cooper
Rationale: Poor access to care and physician shortage are major barriers to hypertension control in sub-Saharan Africa. Implementation of evidence-based systems-level strategies targeted at these barriers are lacking. Objective: To evaluate the comparative effectiveness of provision of health insurance coverage (HIC) alone versus a nurse-led task-shifting strategy for hypertension control (TASSH) plus HIC on systolic BP reduction among patients with uncontrolled hypertension in Ghana. Methods and Findings: Using a pragmatic cluster-randomized trial, 32 community health...

Reproducing & Archiving Scholarship with ReproZip

Vicky Rampin

Triadic interactions support infants’ emerging understanding of intentional actions

Amanda Brandone, Wyntre Stout & Kelsey Moty

Data from: State-aware detection of sensory stimuli in the cortex of the awake mouse

Audrey J. Sederberg, Aurelie Pala, He J. V. Zheng, Biyu J. He & Garrett B. Stanley
Cortical responses to sensory inputs vary across repeated presentations of identical stimuli, but how this trial-to-trial variability impacts detection of sensory inputs is not fully understood. Using multi-channel local field potential (LFP) recordings in primary somatosensory cortex (S1) of the awake mouse, we optimized a data-driven cortical state classifier to predict single-trial sensory-evoked responses, based on features of the spontaneous, ongoing LFP recorded across cortical layers. Our findings show that, by utilizing an ongoing prediction...

Cultural Transmission of Social Essentialism - Online Replication

Rachel Leshin & Marjorie Rhodes

Beringer Polyhedral Sundial

Zenobie Garrett, Matt Cook, John Grime, Zack Lischer-Katz & Kristi Wyatt
3D Photogrammetric Scan of Beringer Polyhedral Sundial (History of Science Collection, University of Oklahoma Libraries)

Female ornaments: is red skin color attractive to males and related to condition in rhesus macaques?

James Higham, Clare Kimock, Tara Mandalaywala, Michael Heistermann, Julie Cascio, Megan Petersdorf, Sandra Winters, Will Allen & Constance Dubuc
Sexual selection produces extravagant male traits, such as colorful ornaments, via female mate choice. More rarely, in mating systems in which males allocate mating effort between multiple females, female ornaments may evolve via male mate choice. Females of many anthropoid primates exhibit ornaments that indicate intra-individual cyclical fertility, but which have also been proposed to function as inter-individual quality signals. Rhesus macaque females are one such species, exhibiting cyclical facial color variation that indicates ovulatory...

Detecting Patterns of Engagement in a Digital Cognitive Skills Training Game

Teresa Ober & Corinne Brenner
In this project, we examined patterns of engagement in a cognitive skills training game designed to enhance the executive function skill of inhibitory control among a group of adolescents. Digital log data were collected while participants played the game. Latent class mixture modeling was conducted both with reaction time and a measure of response accuracy (d’) of log data. Posthoc analyses were conducted to investigate associations between latent class membership and improvement in the Flanker...

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