11 Works

Data from: \"Transcriptome resources for two non-model freshwater crustacean species\" in Genomic Resources Notes accepted 1 October 2014 to 30 November 2014

Mariella Baratti, Federica Cattonaro, Tiziana Di Lorenzo, Valentina Iannilli, Alessio Iannucci, Diana Maria Paola Galassi, Dragos Postolache & Giovanni Giuseppe Vendramin
The aim of this study was to characterize the whole transcriptomes of two common Mediterranean freshwater crustaceans: the copepod Eucyclops serrulatus (Fischer, 1851) and the amphipod Echinogammarus veneris Heller, 1865. Whole transcriptomic approaches may assist in studying the response to environmental pollution of species with little or no available genomic information, allowing the identification of genes involved in adaptation processes to polluted environments that can be studied in expression profile variation at a later stage....

Data from: Unraveling conflicting density- and distance-dependent effects on plant reproduction using a spatially-explicit approach

José M. Fedriani, Thorsten Wiegand, Gemma Calvo, Alberto Suárez-Esteban, Miguel Jácome, Magdalena Żywiec & Miguel Delibes
1. Density- and distance-dependent (DDD) mechanisms are important determinants of plant reproductive success (PRS). Different components of sequential PRS can operate either in the same or in different directions and thus reinforce or neutralize each other, and they may also operate at different spatial scales. Thus, spatially-explicit approaches are needed to detect such complex DDD effects across multiple PRS components and spatial scales. 2. To reveal DDD effects of different components of early PRS of...

Data from: Variation in neighbourhood context shapes frugivore-mediated facilitation and competition among co-dispersed plant species

Jörg Albrecht, Victoria Bohle, Dana Berens, Bogdan Jaroszewicz, Nuria Selva, Nina Farwig & Dana G. Berens
1. Co-occurring and simultaneously fruiting plant species may either compete for dispersal by shared frugivores, or enhance each other's dispersal through joint attraction of frugivores. While competitive plant–plant interactions are expected to cause the evolutionary divergence of fruit phenologies, facilitative interactions are assumed to promote their convergence. To which extent competitive and facilitative interactions among plant species with similar phenological niches are controlled by spatial variation in their local abundance and co-occurrence is poorly understood....

Data from: Apolipoprotein (ApoE) polymorphism is related to differences in potential fertility in women: a case of antagonistic pleiotropy?

Grazyna Jasienska, Peter T. Ellison, Andrzej Galbarczyk, Michal Jasienski, Malgorzata Kalemba-Drozdz, Maria Kapiszewska, Ilona Nenko, Inger Thune & Anna Ziomkiewicz
The alleles that are detrimental to health, especially in older age, are thought to persist in populations because they also confer some benefits for individuals (through antagonistic pleiotropy). The ApoE4 allele at the ApoE locus, encoding apolipoprotein E (ApoE), significantly increases risk of poor health, and yet it is present in many populations at relatively high frequencies. Why has it not been replaced by natural selection with the health-beneficial ApoE3 allele? ApoE is a major...

Data from: Genome-wide analyses suggest parallel selection for universal traits may eclipse local environmental selection in a highly mobile carnivore

Astrid Vik Stronen, Bogumiła Jędrzejewska, Cino Pertoldi, Ditte Demontis, Ettore Randi, Magdalena Niedziałkowska, Tomasz Borowik, Vadim E. Sidorovich, Josip Kusak, Ilpo Kojola, Alexandros A. Karamanlidis, Janis Ozolins, Vitalii Dumenko & Sylwia D. Czarnomska
Ecological and environmental heterogeneity can produce genetic differentiation in highly mobile species. Accordingly, local adaptation may be expected across comparatively short distances in the presence of marked environmental gradients. Within the European continent, wolves (Canis lupus) exhibit distinct north–south population differentiation. We investigated more than 67-K single nucleotide polymorphism (SNP) loci for signatures of local adaptation in 59 unrelated wolves from four previously identified population clusters (northcentral Europe n = 32, Carpathian Mountains n =...

Data from: Plant – herbivorous beetle networks: molecular characterization of trophic ecology within a threatened steppic environment

Łukasz Kajtoch, Daniel Kubisz, Waldemar Heise, Miłosz A. Mazur & Wieslaw Babik
DNA barcoding facilitates many evolutionary and ecological studies, including the examination of the dietary diversity of herbivores. In this study, we present a survey of ecological associations between herbivorous beetles and host plants from seriously threatened European steppic grasslands. We determined host plants for the majority (65%) of steppic leaf beetles (55 species) and weevils (59) known from central Europe using two barcodes (trnL and rbcL) and two sequencing strategies (Sanger for mono/oligophagous species and...

Data from: Biological introduction threats from shipping in a warming Arctic

Chris Ware, Jørgen Berge, Anders Jelmert, Steffen M. Olsen, Loïc Pellissier, Mary Wisz, Darren Kriticos, Georgy Semenov, Slawomir Kwasniewski & Inger G. Alsos
Several decades of research on invasive marine species have yielded a broad understanding of the nature of species invasion mechanisms and associated threats globally. However, this is not true of the Arctic, a region where ongoing climatic changes may promote species invasion. Here, we evaluated risks associated with non-indigenous propagule loads discharged with ships' ballast water to the high-Arctic archipelago, Svalbard, as a case study for the wider Arctic. We sampled and identified transferred propagules...

Data from: \"Diagnostic SNPs for inferring population structure in American mink (Neovison vison) identified through RAD sequencing\" in Genomic Resources Notes accepted 1 October 2014 to 30 November 2014

Janne Pia Thirstrup, Aritz Ruiz-Gonzalez, Jose Martin Pujolar, Peter Foged Larsen, Rasmus O. Nielsen, Ettore Randi, Andrzej Zalewski, Cino Pertoldi, Mariella Baratti, Tiziana Di Lorenzo, Alessio Iannucci, Diana Maria Paola Galassi, Valentina Iannilli, Just Jensen, Dragos Postolache & Giovanni Giuseppe Vendramin
The article documents the public availability of RAD sequencing data and generated SNPs for the American mink (Neovison vison). 224,095 polymorphic loci were identified from 14 mink from which primers were designed for a subset of 380 SNPs. The panel was tested on 211 mink. Fisher’s F-statistics (Fis, FIT and FST) as well as observed (HO), expected (HE) and unbiased expected (uHE) heterozygosity was calculated for the SNPs and 194 SNPs was validated as being...

Data from: On the origin of mongrels: evolutionary history of free-breeding dogs in Eurasia

Małgorzata Pilot, Tadeusz Malewski, Andre E. Moura, Tomasz Grzybowski, Kamil Oleński, Anna Ruść, Stanisław Kamiński, Fernanda Fadel, Daniel S. Mills, Abdulaziz N. Alagaili, Osama B. Mohammed, Grzegorz Kłys, Innokentiy M. Okhlopkov, Ewa Suchecka, Wieslaw Bogdanowicz & Fernanda Ruiz Fadel
Although a large part of the global domestic dog population is free-ranging and free-breeding, knowledge of genetic diversity in these free-breeding dogs (FBDs) and their ancestry relations to pure-breed dogs is limited, and the indigenous status of FBDs in Asia is still uncertain. We analyse genome-wide SNP variability of FBDs across Eurasia, and show that they display weak genetic structure and are genetically distinct from pure-breed dogs rather than constituting an admixture of breeds. Our...

Data from: The contemporary genetic pattern of European moose is shaped by postglacial recolonization, bottlenecks, and the geographical barrier of the Baltic Sea

Magdalena Niedziałkowska, Kris J. Hundertmark, Bogumiła Jędrzejewska, Vadim E. Sidorovich, Hanna Zalewska, Rauno Veeroja, Erling J. Solberg, Sauli Laaksonen, Håkan Sand, Vyacheslav A. Solovyev, Andrey Sagaydak, Juha Tiainen, Rimvydas Juškaitis, Gundega Done, Vadim A. Borodulin, Evgenii A. Tulandin & Krzysztof Niedziałkowski
To investigate genetic diversity and the population structure of the European moose (Alces alces), we analyzed 14 microsatellite loci for 694 samples collected across 16 localities. The highest genetic diversity was detected in Belarus and Russia and the lowest was found in Scandinavia. Two major genetic clusters existed, Scandinavian and continental, and some further spatial structure was detected. There was high concordance between the spatial distribution of microsatellite clusters analyzed in the present study and...

Data from: Time constraint effects on phenology and life history synchrony in a damselfly along a latitudinal gradient

Szymon Śniegula, Maria J. Gołąb & Frank Johansson
In organisms with complex life cycles living in seasonal environments, the synchronisation of phenological events is important from the ecological and evolutionary perspectives. Life history transitions should be synchronised to a greater degree at northern latitudes. We quantified hatching and emergence timing and synchrony in the obligate univoltine damselfly Lestes sponsa along a latitudinal gradient covering its entire north–south range in Europe. In our first experiment, populations from different latitudes were grown in separate climate...

Registration Year

  • 2015
    11

Resource Types

  • Dataset
    11

Affiliations

  • Polish Academy of Sciences
    11
  • Aalborg University
    3
  • Mammal Research Institute
    3
  • Aarhus University
    2
  • Natural Resources Institute Finland
    2
  • Jagiellonian University
    2
  • Zoological Society of London
    2
  • Opole University
    2
  • Helmholtz Centre for Environmental Research
    1
  • University of the Basque Country
    1