9 Works

Data from: The costs and benefits of tolerance to competition in Ipomoea purpurea, the common morning glory

Lindsay Chaney & Regina S. Baucom
Tolerance to competition has been hypothesized to reduce the negative impact of plant-plant competition on fitness. Although competitive interactions are a strong selective force, an analysis of net selection on tolerance to competition is absent in the literature. Using fifty-five full/half-sibling families from 18 maternal lines in the crop weed Ipomoea purpurea we measured fitness and putative tolerance traits when grown with and without competition in an agricultural field. We tested for the presence of...

Data from: Crinoid assemblages from the Fort Payne Formation (late Osagean, early Viséan, Mississippian) from Kentucky, Tennessee, and Alabama

Elyssa B. Krivicich, William I. Ausich & David L. Meyer
The Mississippian Fort Payne Formation of Kentucky, Tennessee, and Alabama is well known for its abundant crinoids and a diverse array of autochthonous and allochthonous carbonate and siliciclastic facies. Using Principal Coordinate Analysis and Non-Metric Multidimensional Scaling, it is demonstrated that distinct, contemporaneous, and geographically adjacent autochthonous facies in south-central Kentucky supported distinct crinoid assemblages. The two carbonate buildup facies had different assemblages dominated by camerate crinoids, carbonate channel-fill deposits were dominated by advanced cladid...

Data from: The evolutionary history of Darwin's finches: speciation, gene flow, and introgression in a fragmented landscape

Heather L. Farrington, Lucinda P. Lawson, Courtney M. Clark & Kenneth Petren
Many classic examples of adaptive radiations take place within fragmented systems such as islands or mountains, but the roles of mosaic landscapes and variable gene flow in facilitating species diversification is poorly understood. Here we combine phylogenetic and landscape genetic approaches to understand diversification in Darwin's finches, a model adaptive radiation. We combined sequence data from 14 nuclear introns, mitochondrial markers, and microsatellite variation from 51 populations of all 15 recognized species. Phylogenetic species-trees recovered...

Data from: Comparative and population mitogenomic analyses of Madagascar’s extinct, giant ‘subfossil’ lemurs

Logan Kistler, Aakrosh Ratan, Laurie R. Godfrey, Brooke E. Crowley, Cris E. Hughes, Runhua Lei, Yinqui Cui, Mindy L. Wood, Kathleen M. Muldoon, Haingoson Andriamialison, John J. McGraw, Lynn P. Tomsho, Stephan C. Schuster, Webb Miller, Edward E. Louis, Anne D. Yoder, Ripan S. Malhi, George H. Perry & Yinqiu Cui
Humans first arrived on Madagascar only a few thousand years ago. Subsequent habitat destruction and hunting activities have had significant impacts on the island's biodiversity, including the extinction of megafauna. For example, we know of 17 recently extinct ‘subfossil’ lemur species, all of which were substantially larger (body mass ∼11–160 kg) than any living population of the ∼100 extant lemur species (largest body mass ∼6.8 kg). We used ancient DNA and genomic methods to study...

Data from: Evaluating the postcopulatory sexual selection hypothesis for genital evolution reveals evidence for pleiotropic harm exerted by the male genital spines of Drosophila ananassae

Karl Grieshop, Michal Polack & M. Polak
The contemporary explanation for the rapid evolutionary diversification of animal genitalia is that such traits evolve by post-copulatory sexual selection. Here, we test the hypothesis that the male genital spines of Drosophila ananassae play an adaptive role in post-copulatory sexual selection. Whereas previous work on two Drosophila species shows that these spines function in precopulatory sexual selection to initiate genital coupling and promote male competitive copulation success, further research is needed to evaluate the potential...

Data from: Ecological fidelity of functional traits based on species presence-absence in a modern mammalian bone assemblage (Amboseli, Kenya)

Joshua H. Miller, Anna Kay Behrensmeyer, Andrew Du, S. Kathleen Lyons, David Patterson, Anikó Tóth, Amelia Villaseñor, Erustus Kanga & Denné Reed
Comparisons between modern death assemblages and their source communities have demonstrated fidelity to species diversity across a variety of environments and taxonomic groups. However, differential species preservation and collection (including body-size bias) in both modern and fossil death assemblages may still skew the representation of other important ecological characteristics. Here, we move beyond live-dead taxonomic fidelity and focus on the recovery of functional ecology (how species interact with their ecosystem) at the community level for...

Data from: Gripping during climbing of arboreal snakes may be safe but not economical

Greg Byrnes & Bruce C. Jayne
On the steep surfaces that are common in arboreal environments, many types of animals without claws or adhesive structures must use muscular force to generate sufficient normal force to prevent slipping and climb successfully. Unlike many limbed arboreal animals that have discrete gripping regions on the feet, the elongate bodies of snakes allow for considerable modulation of both the size and orientation of the gripping region. We quantified the gripping forces of snakes climbing a...

Data from: Landscape structure and the genetic effects of a population collapse

Serena A. Caplins, Kimberly J. Gilbert, Claudia Ciotir, Jens Roland, Stephen F. Matter & Nusha Keyghobadi
Both landscape structure and population size fluctuations influence population genetics. While independent effects of these factors on genetic patterns and processes are well studied, a key challenge is to understand their interaction, as populations are simultaneously exposed to habitat fragmentation and climatic changes that increase variability in population size. In a population network of an alpine butterfly, abundance declined 60–100% in 2003 because of low over-winter survival. Across the network, mean microsatellite genetic diversity did...

Data from: A high-density linkage map for Astyanax mexicanus using genotyping-by-sequencing technology

Brian M. Carlson, Samuel W. Onusko & Joshua B. Gross
The Mexican tetra, Astyanax mexicanus, is a unique model system consisting of cave-adapted and surface-dwelling morphotypes which diverged >1My ago. This remarkable natural experiment has enabled powerful genetic analyses of cave adaptation. Here, we describe the application of next-generation sequencing technology to the creation of a high-density linkage map. Our map comprises over 2200 markers populating 25 linkage groups constructed from genotypic data generated from a single genotyping-by-sequencing project. We leveraged emergent genomic and transcriptomic...

Registration Year

  • 2014

Resource Types

  • Dataset


  • University of Cincinnati
  • University of Massachusetts Amherst
  • The University of Texas at Austin
  • University of Michigan-Ann Arbor
  • Jilin University
  • Duke University
  • The Ohio State University
  • George Washington University
  • University of Virginia
  • University of Alberta