940 Works

sj-docx-1-scm-10.1177_00369330221132156 - Supplemental material for Half a century of the inverse care law: A comparison of general practitioner job satisfaction and patient satisfaction in deprived and affluent areas of Scotland

Stewart W Mercer, Carey J Lunan, Clare MacRae, David AG Henderson, Bridie Fitzpatrick, John Gillies, Bruce Guthrie & Johanna Reilly
Supplemental material, sj-docx-1-scm-10.1177_00369330221132156 for Half a century of the inverse care law: A comparison of general practitioner job satisfaction and patient satisfaction in deprived and affluent areas of Scotland by Stewart W Mercer, Carey J Lunan, Clare MacRae, David AG Henderson, Bridie Fitzpatrick, John Gillies, Bruce Guthrie and Johanna Reilly in Scottish Medical Journal

Data for: Corticosteroid-binding globulin (SERPINA6) establishes postpubertal sex differences in rat adrenal development

Julia NC Toews, Natalie Z M Homer, Tristan J Philippe, Lesley A Hill, Matthew Dordevic, Allende Miguelez-Crespo, Mark Nixon, Geoffrey L Hammond & Victor Viau
Encoded by SerpinA6, plasma corticosteroid-binding globulin (CBG) transports glucocorticoids and regulates their access to cells. We determined how CBG influences plasma corticosterone and adrenal development in rats during the pubertal to adult transition using CRISPR/cas9 to disrupt SerpinA6 gene expression. In the absence of CBG, total plasma corticosterone levels were ∼80% lower in adult rats of both sexes, with a greater absolute reduction in females than in males. Notably, free corticosterone and adrenocorticotropic hormone were...

Using national electronic health records for pandemic preparedness: validation of a parsimonious model for predicting excess deaths among those with COVID-19–a data-driven retrospective cohort study

Mehrdad A Mizani, Ashkan Dashtban, Laura Pasea, Alvina G Lai, Johan Thygesen, Chris Tomlinson, Alex Handy, Jil B Mamza, Tamsin Morris, Sara Khalid, Francesco Zaccardi, Mary Joan Macleod, Fatemeh Torabi, Dexter Canoy, Ashley Akbari, Colin Berry, Thomas Bolton, John Nolan, Kamlesh Khunti, Spiros Denaxas, Harry Hemingway, Cathie Sudlow & Amitava Banerjee
ObjectivesTo use national, pre- and post-pandemic electronic health records (EHR) to develop and validate a scenario-based model incorporating baseline mortality risk, infection rate (IR) and relative risk (RR) of death for prediction of excess deaths.DesignAn EHR-based, retrospective cohort study.SettingLinked EHR in Clinical Practice Research Datalink (CPRD); and linked EHR and COVID-19 data in England provided in NHS Digital Trusted Research Environment (TRE).ParticipantsIn the development (CPRD) and validation (TRE) cohorts, we included 3.8 million and 35.1...

Optimisation of the core subset for the APY approximation of genomic relationships

Ivan Pocrnic, Finn Lindgren, Daniel Tolhurst, William O. Herring & Gregor Gorjanc
Abstract Background By entering the era of mega-scale genomics, we are facing many computational issues with standard genomic evaluation models due to their dense data structure and cubic computational complexity. Several scalable approaches have been proposed to address this challenge, such as the Algorithm for Proven and Young (APY). In APY, genotyped animals are partitioned into core and non-core subsets, which induces a sparser inverse of the genomic relationship matrix. This partitioning is often done...

Additional file 1 of PredictCBC-2.0: a contralateral breast cancer risk prediction model developed and validated in ~ 200,000 patients

Daniele Giardiello, Maartje J. Hooning, Michael Hauptmann, Renske Keeman, B. A. M. Heemskerk-Gerritsen, Heiko Becher, Carl Blomqvist, Stig E. Bojesen, Manjeet K. Bolla, Nicola J. Camp, Kamila Czene, Peter Devilee, Diana M. Eccles, Peter A. Fasching, Jonine D. Figueroa, Henrik Flyger, Montserrat García-Closas, Christopher A. Haiman, Ute Hamann, John L. Hopper, Anna Jakubowska, Floor E. Leeuwen, Annika Lindblom, Jan Lubiński, Sara Margolin … & Marjanka K. Schmidt
Additional file 1. Supplementary methods also including the following tables and figures Table S2. List of BCAC studies (including ABCS source) with the corresponding country and geographic area. Table S4: Clinical utility of the 5-year contralateral breast cancer risk prediction models (PredictCBC-1A with PredictCBC-2.0A and PredictCBC-1B with PredictCBC-2.0B). Figure S1. Visual assessment of calibration through calibration plots in the internal–external cross-validation at 5 years for the PredictCBC-2.0A model. Figure S2. Visual assessment of calibration through...

Additional file 2 of PredictCBC-2.0: a contralateral breast cancer risk prediction model developed and validated in ~ 200,000 patients

Daniele Giardiello, Maartje J. Hooning, Michael Hauptmann, Renske Keeman, B. A. M. Heemskerk-Gerritsen, Heiko Becher, Carl Blomqvist, Stig E. Bojesen, Manjeet K. Bolla, Nicola J. Camp, Kamila Czene, Peter Devilee, Diana M. Eccles, Peter A. Fasching, Jonine D. Figueroa, Henrik Flyger, Montserrat García-Closas, Christopher A. Haiman, Ute Hamann, John L. Hopper, Anna Jakubowska, Floor E. Leeuwen, Annika Lindblom, Jan Lubiński, Sara Margolin … & Marjanka K. Schmidt
Additional file 2: Table S1. Description of the studies included in the analyses.

Additional file 3 of Comparative analysis of the anthelmintic efficacy of European heather extracts on Teladorsagia circumcincta and Trichostrongylus colubriformis egg hatching and larval motility

Francesca Shepherd, Caroline Chylinski, Michael R. Hutchings, Joana Lima, Ross Davidson, Robert Kelly, Alastair Macrae, Juha-Pekka Salminen, Marica T. Engström, Veronika Maurer, Håvard Steinshamn, Susanne Fittje, Angela Morell Perez, Rocío Rosa García & Spiridoula Athanasiadou
Additional file 3: Table S2. Average egg hatching (%) and standard deviation (SE) for C. vulgaris extracts at decreasing concentrations (n = 3). Table S3. Average egg hatching (%) and SE for Spanish heather samples at decreasing concentrations (n = 3).

Albumin versus balanced crystalloid for resuscitation in the treatment of sepsis: A protocol for a randomised controlled feasibility study, “ABC-Sepsis”

John Cafferkey, Andrew Ferguson, Julia Grahamslaw, Katherine Oatey, John Norrie, Nazir Lone, Timothy Walsh, Daniel Horner, Andy Appelboam, Peter Hall, Richard Skipworth, Derek Bell, Kevin Rooney, Manu Shankar-Hari, Alasdair Corfield & Alasdair Gray
BackgroundPatients presenting with suspected sepsis to secondary care often require fluid resuscitation to correct hypovolaemia and/or septic shock. Existing evidence signals, but does not demonstrate, a benefit for regimes including albumin over balanced crystalloid alone. However, interventions may be started too late, missing a critical resuscitation window.MethodsABC Sepsis is a currently recruiting randomised controlled feasibility trial comparing 5% human albumin solution (HAS) with balanced crystalloid for fluid resuscitation in patients with suspected sepsis. This multicentre...

Lignans from Bupleurum marginatum and their antioxidant activity

Jian Zhou, Xin He, Rongjin Sun, Zhenlong Yu, Chao Wang, Sa Deng, Baojing Zhang, Shanshan Huang, Chunhui Han & Dawei Li
A new aryltetralin lignan, bupleroid A (1), along with ten known analogues (2–11) were isolated from Bupleurum marginatum. The structures of these isolates were determined by 1D and 2D NMR, HRESIMS, and ECD data analysis. In addition, the DPPH radical scavenging capacities of all compounds were evaluated. Compound 6 exhibited good DPPH radical scavenging activity at a concentration of 50 μM.

Supplementary Information for Dynamic model of bovine brucellosis to investigate control strategies in India from Modelling the control of bovine brucellosis in India

H. R. Holt, M. Walker, W. Beauvais, P. Kaur, J. S. Bedi, P. Mangtani, N. S. Sharma, J. P. S. Gill, J. Godfroid, J. McGiven & J. Guitian
This file contains Supplementary Information text with further description of model definition including equations, Figure S1, Figure S2 and Supplementary Information References.

Supplementary Information for Dynamic model of bovine brucellosis to investigate control strategies in India from Modelling the control of bovine brucellosis in India

H. R. Holt, M. Walker, W. Beauvais, P. Kaur, J. S. Bedi, P. Mangtani, N. S. Sharma, J. P. S. Gill, J. Godfroid, J. McGiven & J. Guitian
This file contains Supplementary Information text with further description of model definition including equations, Figure S1, Figure S2 and Supplementary Information References.

Socioeconomic inequalities in asthma and respiratory symptoms in a high-income country: changes from 1996 to 2016

Christian Schyllert, Anne Lindberg, Linnea Hedman, Caroline Stridsman, Martin Andersson, Heidi Andersén, Päivi Piirilä, Bright I. Nwaru, Steinar Krokstad, Eva Rönmark & Helena Backman
Objective: Low socioeconomic status based both on educational level and income has been associated with asthma and respiratory symptoms, but changes over time in these associations have rarely been studied. The aim was to study the associations between educational or income inequality and asthma and respiratory symptoms among women and men over a 20-year period in northern Sweden. Methods: The study was performed within the Obstructive Lung disease in Northern Sweden (OLIN) research program. Mailed...

Gender-ing English language classes across the globe: Practical activities for teachers

Vander Viana & Aisling O’Boyle

Gender equality in English language teaching practice: A resource book for teacher education

Vander Viana & Aisling O’Boyle

Sport, Cultural Relations and Peacebuilding

Grant Jarvie

GEospatial aNalysis of ExtRacorporeal membrane oxygenATion in Europe (GENERATE)

Stuart Gillon, Chunyu Zheng, Zhiqiang Feng, Marcel Fleig, Tommaso Scquizzato, Jan Belohlavek, Roberto Lorusso, Nazir Lone & Justyna Swol
IntroductionA cross-sectional survey GENERATE (GEospatial aNalysis of ExtRacorporeal membrane oxygenATion in Europe) initiated on behalf of the European chapter of the Extracorporeal Life Support Organization (EuroELSO), aims to provide a systematic, detailed description of contemporary Extracorporeal Life Support (ECLS) provision in Europe, map the spatial distribution of ECLS centers, and the accessibility of ECLS.MethodsStructured data collection forms were used to create a narrative description of ECLS provision in EuroELSO affiliated countries. This consisted of both...

Device safety assessment of bronchoscopic microwave ablation of normal swine peripheral lung using robotic-assisted bronchoscopy

Hector De Leon, Kevin Royalty, Louie Mingione, David Jaekel, Sarvesh Periyasamy, David Wilson, Paul Laeseke, William C. Stoffregen, Tim Muench, John P. Matonick, Grzegorz L. Kaluza & Gustavo Cipolla
The aim of this study was to assess the safety of bronchoscopic microwave ablation (MWA) of peripheral lung parenchyma using the NEUWAVE™ FLEX Microwave Ablation System, and robotic-assisted bronchoscopy (RAB) using the MONARCH™ Platform in a swine model. Computed tomography (CT)-guided RAB MWA was performed in the peripheral lung parenchyma of 17 Yorkshire swine (40–50 kg) and procedural adverse events (AEs) documented. The acute group (day 0, n = 5) received 4 MWAs at 100...

Data from: The extent and genetic basis of phenotypic divergence in life history traits in Mimulus guttatus

Jannice Friedman, Alex D. Twyford, John H. Willis & Benjamin K. Blackman
Differential natural selection acting on populations in contrasting environments often results in adaptive divergence in multivariate phenotypes. Multivariate trait divergence across populations could be caused by selection on pleiotropic alleles or through many independent loci with trait-specific effects. Here, we assess patterns of association between a suite of traits contributing to life history divergence in the common monkeyflower, Mimulus guttatus, and examine the genetic architecture underlying these correlations. A common garden survey of 74 populations...

Data from: Bacterial cooperation causes systematic errors in pathogen risk assessment due to the failure of the independent action hypothesis

Daniel M. Cornforth, Andrew Matthews, Sam P. Brown & Ben Raymond
The Independent Action Hypothesis (IAH) states that pathogenic individuals (cells, spores, virus particles etc.) behave independently of each other, so that each has an independent probability of causing systemic infection or death. The IAH is not just of basic scientific interest; it forms the basis of our current estimates of infectious disease risk in humans. Despite the important role of the IAH in managing disease interventions for food and water-borne pathogens, experimental support for the...

Data from: Spontaneous mutation accumulation in multiple strains of the green alga, Chlamydomonas reinhardtii

Andrew D. Morgan, Rob W. Ness, Peter David Keightley & Nick Colegrave
Estimates of mutational parameters, such as the average fitness effect of a new mutation and the rate at which new genetic variation for fitness is created by mutation, are important for the understanding of many biological processes. However, the causes of interspecific variation in mutational parameters and the extent to which they vary within species remain largely unknown. We maintained multiple strains of the unicellular eukaryote Chlamydomonas reinhardtii, for approximately 1000 generations under relaxed selection...

Data from: Cultural evolution of systematically structured behaviour in a non-human primate

Nicolas Claidière, Kenny Smith, Simon Kirby & Joël Fagot
Culture pervades human life and is at the origin of the success of our species. A wide range of other animals have culture too, but often in a limited form that does not complexify through the gradual accumulation of innovations. We developed a new paradigm to study cultural evolution in primates in order to better evaluate our closest relatives' cultural capacities. Previous studies using transmission chain experimental paradigms, in which the behavioural output of one...

Data from: Selection history and epistatic interactions impact dynamics of adaptation to novel environmental stresses

Mato Lagator, Nick Colegrave & Paul Neve
In rapidly changing environments, selection history may impact the dynamics of adaptation. Mutations selected in one environment may result in pleiotropic fitness trade-offs in subsequent novel environments, slowing the rates of adaptation. Epistatic interactions between mutations selected in sequential stressful environments may slow or accelerate subsequent rates of adaptation, depending on the nature of that interaction. We explored the dynamics of adaptation during sequential exposure to herbicides with different modes of action in Chlamydomonas reinhardtii....

Data from: Determining the phylogenetic and phylogeographic origin of highly pathogenic avian influenza (H7N3) in Mexico

Lu Lu, Samantha J. Lycett & Andrew J. Leigh Brown
Highly pathogenic (HP) avian influenza virus (AIV) H7N3 outbreaks occurred 3 times in the Americas in the past 10 years and caused severe economic loss in the affected regions. In June/July 2012, new HP H7N3 outbreaks occurred at commercial farms in Jalisco, Mexico. Outbreaks continued to be identified in neighbouring states in Mexico till August 2013. To explore the origin of this outbreak, time resolved phylogenetic trees were generated from the eight segments of full-length...

Data from: Basal dinosauriform and theropod dinosaurs from the middle-late Norian (Late Triassic) of Poland: implications for Triassic dinosaur evolution and distribution

Grzegorz Niedźwiedzki, Stephen L. Brusatte, Tomasz Sulej & Richard J. Butler
The rise of dinosaurs during the Triassic is a widely studied evolutionary radiation, but there are still many unanswered questions about early dinosaur evolution and biogeography that are hampered by an unevenly sampled Late Triassic fossil record. Although very common in western North America and parts of South America, dinosaur (and more basal dinosauriform) remains are relatively rare in the Upper Triassic deposits of Europe, making any new discoveries critically important. One of the most...

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