222 Works

Develop and validate a radiomics space-time model to predict the pathological complete response in patients undergoing neoadjuvant treatment of rectal cancer: an artificial intelligence model study based on machine learning

Jiaxuan Peng, Wei Wang, Hui Jin, Xue Qin, Jie Hou, Zhang Yang & Zhenyu Shu
Abstract Objective In this study, we aimed to investigate the predictive efficacy of magnetic resonance imaging (MRI) radiomics features at different time points of neoadjuvant therapy for rectal cancer in patients with pathological complete response (pCR). Furthermore, we aimed to develop and validate a radiomics space–time model (RSTM) using machine learning for artificial intelligence interventions in predicting pCR in patients. Methods Clinical and imaging data of 83 rectal cancer patients were retrospectively analyzed, and the...

Develop and validate a radiomics space-time model to predict the pathological complete response in patients undergoing neoadjuvant treatment of rectal cancer: an artificial intelligence model study based on machine learning

Jiaxuan Peng, Wei Wang, Hui Jin, Xue Qin, Jie Hou, Zhang Yang & Zhenyu Shu
Abstract Objective In this study, we aimed to investigate the predictive efficacy of magnetic resonance imaging (MRI) radiomics features at different time points of neoadjuvant therapy for rectal cancer in patients with pathological complete response (pCR). Furthermore, we aimed to develop and validate a radiomics space–time model (RSTM) using machine learning for artificial intelligence interventions in predicting pCR in patients. Methods Clinical and imaging data of 83 rectal cancer patients were retrospectively analyzed, and the...

Data from: REM sleep stabilizes hypothalamic representation of feeding behavior

Lukas T. Oesch, Mary Gazea, Thomas C. Gent, Mojtaba Bandarabadi, Carolina Gutierrez Herrera & Antoine R. Adamantidis
During rapid eye movement (REM) sleep, behavioral unresponsiveness contrasts strongly with intense brain-wide neural network dynamics. Yet, the physiological functions of this cellular activation remain unclear. Using in vivo calcium imaging in freely behaving mice, we found that inhibitory neurons in the lateral hypothalamus (LHvgat) show unique activity patterns during feeding that are reactivated during REM, but not NREM, sleep. REM sleep specific optogenetic silencing of LHvgat cells induced a re-organization of these activity patterns...

Deep-sequencing of viral genomes from treatment-naive HIV-infected persons shows positive association between intrahost genetic diversity and viral load

Migle Gabrielaite, Marc Bennedbæk, Malthe Sebro Rasmussen, Virginia Kan, Hansjakob Furrer, Robert Flisiak, Marcelo Losso, Jens D. Lundgren & Rasmus L. Marvig
Background: Infection with human immunodeficiency virus type 1 (HIV) typically results from transmission of a small and genetically uniform viral population. Following transmission, the virus population becomes more diverse because of recombination and acquired mutations through genetic drift and selection. Viral intrahost genetic diversity remains a major obstacle to the cure of HIV; however, there is a disagreement whether intrahost viral genetic diversification associates positively or negatively with disease progression and progression markers. Viral load...

Supplemental Material - Coronary artery calcium score and coronary computed tomography angiography predict one-year mortality in patients with type 2 diabetes and peripheral artery disease undergoing partial foot amputation

Evgeniya Shalaeva, Arjola Bano, Ulugbek Kasimov, Bakhtiyor Janabaev, Iris Baumgartner, Markus Laimer & Hugo Saner
Supplemental Material for Coronary artery calcium score and coronary computed tomography angiography predict one-year mortality in patients with type 2 diabetes and peripheral artery disease undergoing partial foot amputation by Evgeniya Shalaeva, Arjola Bano, Ulugbek Kasimov, Bakhtiyor Janabaev, Iris Baumgartner, Markus Laimer and Hugo Saner in Diabetes and Vascular Disease Research

Additional file 1 of StOP? II trial: cluster randomized clinical trial to test the implementation of a toolbox for structured communication in the operating room—study protocol

Sandra Keller, Franziska Tschan, Norbert K. Semmer, Sven Trelle, Tanja Manser & Guido Beldi
Additional file 1.

sj-docx-1-hej-10.1177_00178969221133238 – Supplemental material for Paediatric manikins and school nurses as Basic Life Support coordinators: A useful strategy for schools?

Martín Otero-Agra, Luz Rey-Fernández, David Pacheco-Rodríguez, Felipe Fernández-Méndez, Roberto Barcala-Furelos & Robert Greif
Supplemental material, sj-docx-1-hej-10.1177_00178969221133238 for Paediatric manikins and school nurses as Basic Life Support coordinators: A useful strategy for schools? by Martín Otero-Agra, Luz Rey-Fernández, David Pacheco-Rodríguez, Felipe Fernández-Méndez, Roberto Barcala-Furelos and Robert Greif in Health Education Journal

Additional file 2 of VoiceS: voice quality after transoral CO2 laser surgery versus single vocal cord irradiation for unilateral stage 0 and I glottic larynx cancer—a randomized phase III trial

Philipp Reinhardt, Roland Giger, Eberhard Seifert, Mohamed Shelan, Elena Riggenbach, Dario Terribilini, Andreas Joosten, Daniel H. Schanne, Daniel M. Aebersold, Peter Manser, Matthias S. Dettmer, Christian Simon, Esat M. Ozsahin, Raphaël Moeckli, Andreas Limacher, Francesca Caparrotti, Deepa Nair, Jean Bourhis, Martina A. Broglie, Abrahim Al-Mamgani & Olgun Elicin
Additional file 2. SPIRIT checklist

UBR7 inhibits HCC tumorigenesis by targeting Keap1/Nrf2/Bach1/HK2 and glycolysis

Liang Zhao, Min Kang, Xiaomeng Liu, Zhenran Wang, Yan Wang, Haiqiang Chen, Wenhui Liu, Shiqian Liu, Baibei Li, Chong Li, Antao Chang & Bo Tang
Abstract Background Glycolysis metabolism is an attractive target for cancer therapy. Reprogramming metabolic pathways could improve the ability of metabolic inhibitors to suppress cancers with limited treatment options. The ubiquitin–proteasome system facilitates the turnover of most intracellular proteins with E3 ligase conferring the target selection and specificity. Ubiquitin protein ligase E3 component N-recognin 7 (UBR7), among the least studied E3 ligases, recognizes its substrate through a plant homeodomain (PHD) finger. Here, we bring into focus...

Additional file 1 of Development and validation of a prognostic model for the early identification of COVID-19 patients at risk of developing common long COVID symptoms

Manja Deforth, Caroline E. Gebhard, Susan Bengs, Philipp K. Buehler, Reto A. Schuepbach, Annelies S. Zinkernagel, Silvio D. Brugger, Claudio T. Acevedo, Dimitri Patriki, Benedikt Wiggli, Raphael Twerenbold, Gabriela M. Kuster, Hans Pargger, Joerg C. Schefold, Thibaud Spinetti, Pedro D. Wendel-Garcia, Daniel A. Hofmaenner, Bianca Gysi, Martin Siegemund, Georg Heinze, Vera Regitz-Zagrosek, Catherine Gebhard & Ulrike Held
Additional file 1. Histogram, smooth function and Pearson's correlation coefficients for continuous candidate predictors.

Additional file 2 of Development and validation of a prognostic model for the early identification of COVID-19 patients at risk of developing common long COVID symptoms

Manja Deforth, Caroline E. Gebhard, Susan Bengs, Philipp K. Buehler, Reto A. Schuepbach, Annelies S. Zinkernagel, Silvio D. Brugger, Claudio T. Acevedo, Dimitri Patriki, Benedikt Wiggli, Raphael Twerenbold, Gabriela M. Kuster, Hans Pargger, Joerg C. Schefold, Thibaud Spinetti, Pedro D. Wendel-Garcia, Daniel A. Hofmaenner, Bianca Gysi, Martin Siegemund, Georg Heinze, Vera Regitz-Zagrosek, Catherine Gebhard & Ulrike Held
Additional file 2. Partial plots for continuous candidate predictors of the global logistic generalized additive model. The y-axis contains the REST outcome on the log-odds scale $$(ln(\frac{\hat{y}}{1-\hat{y}}))$$ ( l n ( y ^ 1 - y ^ ) ) , with the patient's predicted probability $$\hat{y}$$ y ^ of developing REST symptoms.

Antenatal and postpartum immunological markers levels in women with HIV infection and malnutrition in a low resource setting: A pilot study

Panashe Chandiwana, Privilege T Munjoma, Arthur J Mazhandu, Lovemore R Mazengera, Benjamin Misselwitz, Sebastian B U Jordi, Bahtiyar Yilmaz & Kerina Duri
Objectives: Both, Human Immunodeficiency Virus (HIV) infection and malnutrition are major challenges in pregnancy and postpartum in low-resource settings and the respective cytokine levels remain poorly described. The main objectives of this study were to find immune markers that are associated with HIV infection and malnutrition in pregnant women and to determine how these would change at 14 weeks postpartum.Method: Pregnant women of at least 20 weeks gestational age were enrolled into this longitudinal observational...

Serum S-100B adds incremental value for the prediction of symptomatic intracranial hemorrhage and brain edema after acute ischemic stroke

Tim Honegger, Juliane Schweizer, Antonela Bicvic, Laura P Westphal, Valerie Schütz, Corinne Inauen, Thomas Pokorny, Katja Bracher, Marcel Arnold, Urs Fischer, Leo H Bonati, Gian Marco De Marchis, Krassen Nedeltchev, Timo Kahles, Carlo Cereda, Georg Kägi, Joan Montaner, Alejandro Bustamante, Elena Palà, George Ntaios, Christian Foerch, Andreas Luft, Katharina Spanaus, Lanja Saleh, Arnold von Eckardstein … & Mira Katan
Background:Early identification of patients developing symptomatic intracranial hemorrhage and symptomatic brain edema after acute ischemic stroke is essential for clinical decision-making. Astroglial protein S-100B is a marker of blood-brain barrier disruption, which plays an important role in the formation of intracranial hemorrhage and brain edema. In this study, we assessed the prognostic value of serum S-100B for the development of these complications.Methods:Serum S-100B levels were measured within 24 h from symptom onset in 1749 consecutive...

sj-docx-1-sel-10.1177_17585732221145608 - Supplemental material for Fast treatment of anterior shoulder dislocations with two sedation-free methods: The Davos self-reduction method and Arlt method

Lukas Werner Widmer, Till Dominic Lerch, Anna Genthner, Lara Pozzi, James Geiger & Hans-Curd Frei
Supplemental material, sj-docx-1-sel-10.1177_17585732221145608 for Fast treatment of anterior shoulder dislocations with two sedation-free methods: The Davos self-reduction method and Arlt method by Lukas Werner Widmer, Till Dominic Lerch, Anna Genthner, Lara Pozzi, James Geiger and Hans-Curd Frei in Shoulder & Elbow

Pretreatment Serum Lactate Dehydrogenase and Metastases Numbers as Potential Determinants of Anti-PD-1 Therapy Outcome in Nasopharyngeal Carcinoma

Wael A. S. Ali, Xinxin Huang, Yuehan Wu, Yuxiang Ma, Hui Pan, Jun Liao, Zhang Yang, Shaodong Hong, Yunpeng Yang, Yan Huang, Yuanyuan Zhao, Wenfeng Fang, Hongyun Zhao & Li Zhang
BackgroundWe aimed to investigate the determinant factors of anti-PD-1 therapy outcome in nasopharyngeal carcinoma (NPC).MethodsIn this retrospective study, we included 64 patients with recurrent/metastatic NPC. The association of patients’ characteristics, C-reactive protein (CRP), neutrophil to lymphocyte ratio (NLR), and lactate dehydrogenase (LDH) with survival benefit of anti-PD-1 therapy were analyzed using Cox regression models and Kaplan-Meier analyses. Patients were divided based on the median value of CRP, NLR or LDH into different subgroups.ResultsAt a median...

sj-docx-2-eso-10.1177_23969873221145391 – Supplemental material for Serum S-100B adds incremental value for the prediction of symptomatic intracranial hemorrhage and brain edema after acute ischemic stroke

Tim Honegger, Juliane Schweizer, Antonela Bicvic, Laura P Westphal, Valerie Schütz, Corinne Inauen, Thomas Pokorny, Katja Bracher, Marcel Arnold, Urs Fischer, Leo H Bonati, Gian Marco De Marchis, Krassen Nedeltchev, Timo Kahles, Carlo Cereda, Georg Kägi, Joan Montaner, Alejandro Bustamante, Elena Palà, George Ntaios, Christian Foerch, Andreas Luft, Katharina Spanaus, Lanja Saleh, Arnold von Eckardstein … & Mira Katan
Supplemental material, sj-docx-2-eso-10.1177_23969873221145391 for Serum S-100B adds incremental value for the prediction of symptomatic intracranial hemorrhage and brain edema after acute ischemic stroke by Tim Honegger, Juliane Schweizer, Antonela Bicvic, Laura P Westphal, Valerie Schütz, Corinne Inauen, Thomas Pokorny, Katja Bracher, Marcel Arnold, Urs Fischer, Leo H Bonati, Gian Marco De Marchis, Krassen Nedeltchev, Timo Kahles, Carlo Cereda, Georg Kägi, Joan Montaner, Alejandro Bustamante, Elena Palà, George Ntaios, Christian Foerch, Andreas Luft, Katharina Spanaus, Lanja...

Additional file 1 of Association between remnant cholesterol and verbal learning and memory function in the elderly in the US

Ying-Yi Xie, Liang Zhao, Li-Jian Gao, Rui-Xia Xu, Ying Gao, Ke-Fei Dou, Yuan-Lin Guo & Yong-Ming He
Additional file 1: Table S1. Weighted multivariable ordinal logistic regression analysis between RC levels (log-transformed) and age-stratified quartiles of the CERAD delayed score. Table S2. Weighted multivariable ordinal logistic regression analysis between the TC/RC ratio (log-transformed) and age-stratified quartiles of the CERAD delayed score.

Additional file 2 of Impact of random outliers in auto-segmented targets on radiotherapy treatment plans for glioblastoma

Robert Poel, Elias Rüfenacht, Ekin Ermis, Michael Müller, Michael K. Fix, Daniel M. Aebersold, Peter Manser & Mauricio Reyes
Additional file 2. Results deep learning segmented outliers.

Additional file 3 of mTORC1-c-Myc pathway rewires methionine metabolism for HCC progression through suppressing SIRT4 mediated ADP ribosylation of MAT2A

Liang Zhao, Huizhao Su, Xiaomeng Liu, Hongquan Wang, Yukuan Feng, Yan Wang, Haiqiang Chen, Luo Dai, Shihui Lai, Siqi Xu, Chong Li, Jihui Hao & Bo Tang
Additional file 3: Table S2. The changes of metabolite levels upon methionine restriction in livers of HCC mouce models.

Additional file 1 of Impact of random outliers in auto-segmented targets on radiotherapy treatment plans for glioblastoma

Robert Poel, Elias Rüfenacht, Ekin Ermis, Michael Müller, Michael K. Fix, Daniel M. Aebersold, Peter Manser & Mauricio Reyes
Additional file 1. Results synthetic experiments.

Supplementary document for Sub-Wavelength Passive Single-Shot Computational Super-Oscillatory Imaging - 6126458.pdf

Haitang Yang, Esther Lin, Kiriakos Kutulakos & George Eleftheriades
Extra simulations and experimental results

Sub-Wavelength Passive Single-Shot Computational Super-Oscillatory Imaging

Haitang Yang, Esther Lin, Kiriakos Kutulakos & George Eleftheriades
All optical imaging systems suffer from one fundamental constraint on image resolution—the diffraction limit. Prior efforts for breaking the diffraction limit rely on near-field placements, long scanning times, fluorescence labeling, active illuminations, or specially-designed superlenses. We present a technique that combines the mathematical concept of super-oscillations (SO) and computational deconvolution techniques to achieve a passive single-shot deep sub-diffraction imaging method free of these restrictions. Furthermore, our method requires no training data and is scene-independent. We...

Green HEMS: how to make it happen

E. ter Avest, M. Kratz, T. Dill & M. Palmer
Additional files from Green HEMS: how to make it happen

Additional file 1 of Mapping associations between anxiety and sleep problems among outpatients in high-altitude areas: a network analysis

Yu Jin, Jiaqi Li, Jing Ye, Xianyu Luo, Amanda Wilson, Lanxue Mu, Pinyi Zhou, Yunhui Lv & Yuanyuan Wang
Supplementary Material 1 Appendix

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  • University Hospital of Bern
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