Polished UNCD surface topography measured using TEM, AFM, and Stylus Profilometry

This repository contains simulated datasets relating to the publication: Henshaw JM, Fromhage L, Jones AG (2022) The evolution of mating preferences for genetic attractiveness and quality in the presence of sensory bias. Proc. Natl. Acad. Sci. USA (doi:10.1073/pnas.2206262119) In this paper, we simulate the evolution of female preferences for multiple male ornament types (e.g., ‘Fisherian’, ‘handicap’ and ‘indicator’ ornaments) that differ in their associations with genes for attractiveness and for general ‘quality’ (operationalized as the...

This surface is the result of a Molecular Dynamics simulation of bi-axial compression of a CuZr (50% Cu, 50% Zr) metallic glass. The initial configuration was a CuZr cube with side length 100 nm. The glass had been produced by quenching from the melt at a rate of 1e11 K/s under fully periodic boundary conditions. In the compression simulation, the x- and y-directions were periodic, but the z-direction was free, hence the glass had free...

Abstract Background Ribosomal biogenesis and ribosomal proteins have attracted attention in the context of tumor biology in recent years. Instead of being mere translational machineries, ribosomes might play an active role in tumor initiation and progression. Despite its importance, regulation of ribosomal biogenesis is still not completely understood. Methods Using Gene Set Enrichment Analysis of RNA sequencing and proteomical mass spectrometry data in breast cancer cells expressing Krüppel-like factor 7 (KLF7), we identified processes altered...

Additional file 1: Table S1. Wood and carbon stocks in living trees in BL.Table S2. Wood and carbon stocks in living trees in WPS. Table S3. Wood and carbon stocks in living trees in NPS. Table S4. Deadwood stocks with the corresponding carbon masses for WPS and NPS. Table S5. Total carbon stocks in the forest. Table S6. Conversion factors for carbon in different tree species groups. Table S7. Wood and carbon volumes extracted in...

Additional file 1: Table S1. Vaccine effectiveness against viral variants. Studies of vaccine effectiveness against viral variants. Related to Table 2.

Additional file 3: Table S3. Vaccine booster effectiveness against viral variants. Studies of vaccine booster effectiveness against viral variants. Related to Table 2.

Additional file 2: Fig. S1. Example of calculating effect estimates. Fig. S2. Forest plot, random sequence (binary outcomes), main analysis. Fig. S3. Forest plot, random sequence (binary outcomes), sensitivity analysis: excluding highly correlated outcomes. Fig. S4. Forest plot, random sequence (binary outcomes), sensitivity analysis: including only one outcome per comparison. Fig. S5. Forest plot, random sequence (binary outcomes), subgroup analysis: clusters of interventions. Fig. S6. Forest plot, random sequence (binary outcomes), subgroup analysis: clusters of...

Supplemental material, sj-docx-1-cpa-10.1177_07067437221128477 for Trends in Involuntary Psychiatric Hospitalization in British Columbia: Descriptive Analysis of Population-Based Linked Administrative Data from 2008 to 2018 by Jackson P. Loyal, M. Ruth Lavergne, Mehdi Shirmaleki, Benedikt Fischer, Ridhwana Kaoser, Jack Makolewksi and Will Small in The Canadian Journal of Psychiatry

Supplemental material, sj-docx-1-tag-10.1177_17562848221100106 for Impact of NAFLD on clinical outcomes in hepatocellular carcinoma treated with sorafenib: an international cohort study by Jessica Howell, Amit Samani, Binish Mannan, Saur Hajiev, Leila Motedayen Aval, Rebecca Abdelmalak, Vincent C. Tam, Dominik Bettinger, Robert Thimme, Tamar H. Taddei, David E. Kaplan, Max Seidensticker and Rohini Sharma in Therapeutic Advances in Gastroenterology

Abstract Background Arteriovenous fistula (AVF) maturation is a process involving remodeling of venous arm of the AVFs. It is a challenge to balance adaptive AVF remodeling and neointima formation. In this study we temporally controlled Notch activation to promote AVF maturation while avoiding neointima formation. Methods Temporal Notch activation was controlled by regulating the expression of Notch transcription factor, RBP-Jκ, or dnMAML1 (dominant negative MAML2) in vascular smooth muscle cells (VSMCs). AVF mouse model was...

Additional file 9. Table S9A–D. Over-represented KEGG pathway among gene clusters in MaMe21, MaMel63a, HEM, and HDF.

Additional file 3: Figure S3. Analysis of processes involved in ribosomal biogenesis in MCF7 cells. A) KLF7OE does not lead to significant changes in mRNA expression of the indicated genes in export, pseudouridylation, rRNA cleavage. B) No changes in POP1 and RMRP mRNA level by KLF7OE in MCF7 cells.

Additional file 3: Figure S3. Analysis of processes involved in ribosomal biogenesis in MCF7 cells. A) KLF7OE does not lead to significant changes in mRNA expression of the indicated genes in export, pseudouridylation, rRNA cleavage. B) No changes in POP1 and RMRP mRNA level by KLF7OE in MCF7 cells.

Recent studies have emphasized forests as crucial habitat for wild bees. In Europe, most forests are managed following the principles of close‐to‐nature silviculture, which combine timber production and nature conservation. However, open late and early successional stages within these forests are largely missing, which could be important for wild bees. This highlights that close‐to‐nature silviculture alone might not be sufficient to conserve bees within temperate forests. Open structures such as canopy gaps and road verges...

Abstract Background Lyme borreliosis (LB) is the most common tick-borne infectious disease in the northern hemisphere. The diagnosis of LB is usually made by clinical symptoms and subsequently supported by serology. In Europe, a two-step testing consisting of an enzyme-linked immunosorbent assay (ELISA) and an immunoblot is recommended. However, due to the low sensitivity of the currently available tests, antibody detection is sometimes inaccurate, especially in the early phase of infection, leading to underdiagnoses. Methods...

Additional file 1: Table S1: Borrelia Antigens used in the Borrelia multiplex. Table S2: Assay precision and LOD of the Borrelia multiplex on different Luminex platforms. . Table S3: Cohen’s kappa coefficients for the comparison of the Borrelia multiplex with commercial Borrelia test. Table S4: Serostatus of 1,555 serum samples from a German serological survey (MuSPAD study). Figure S1: Dilution linearity of Borrelia multiplex on different Luminex platforms.. Figure S2: ROC analysis for Borrelia specific...

Additional file 1: Table S1: Borrelia Antigens used in the Borrelia multiplex. Table S2: Assay precision and LOD of the Borrelia multiplex on different Luminex platforms. . Table S3: Cohen’s kappa coefficients for the comparison of the Borrelia multiplex with commercial Borrelia test. Table S4: Serostatus of 1,555 serum samples from a German serological survey (MuSPAD study). Figure S1: Dilution linearity of Borrelia multiplex on different Luminex platforms.. Figure S2: ROC analysis for Borrelia specific...

Additional file 1.

This data set is several three-component seismic data observed in Huainan Deep Underground Lab, including several small to moderate earthquakes and microseisms. All the data are recorded by CMG-40TDE broadband seismometers, and has been preprocessed by removing the linear trend and mean, removing instrument response and filtering.

Abstract Background IgA vasculitis (IgAV) is the most common form of systemic vasculitis in childhood and frequently involves the kidney. A minority of patients with IgA vasculitis nephritis (IgAVN), especially those presenting with heavy proteinuria and/or kidney failure at onset, are at risk of chronic end-stage kidney disease. For deciding upon treatment intensity, knowledge of the short-term clinical course of IgAVN is needed to improve treatment algorithms. Methods For this retrospective multicenter study, the medical...

Abstract Background Randomized controlled trials (RCTs) and cohort studies are the most common study design types used to assess treatment effects of medical interventions. We aimed to hypothetically pool bodies of evidence (BoE) from RCTs with matched BoE from cohort studies included in the same systematic review. Methods BoE derived from systematic reviews of RCTs and cohort studies published in the 13 medical journals with the highest impact factor were considered. We re-analyzed effect estimates...

Additional file 1. Supplement 1. Body mass index (BMI), 17β-estradiol, testosterone, sex hormone binding globulin and meannew bone formation (NBF) in female and male patients. Supplement 2. Reference ranges (a) of the body mass index (BMI), according to the World HealthOrganization (WHO, 2000), regardless of gender and (b) of the sex steroid hormone serumconcentrations according to the criteria of the Labor Berlin - Charité Vivantes GmbH.

Additional file 1: Table S1: Details about the antibodies used in the study.

Additional file 3. Table S3A–F. Over-represented biological processes (GO-bp) among over-expressed genes in MaMel cell lines.