518 Works
Ecological quality assessment and monitoring using a time-series remote sensing-based ecological index (ts-RSEI)
Chao Sun, Jialin Li, Yongchao Liu, Luodan Cao, Jiahao Zheng, Zhenjie Yang, Junwei Ye & Yue Li
Ecological quality assessment is fundamental to revealing changes in ecological environments before the development of effective ecological conservation policies. The complex ecological environment can be assessed more reliably when multiple remote sensing indices are integrated, such as in the use of the prevalent Remote Sensing-based Ecological Index (RSEI). However, for effective ecological quality assessment, the requirement of acquisition time consistency for images has become an outstanding issue for broadening the application of the RSEI. In...
Additional file 1 of Targeted OUM1/PTPRZ1 silencing and synergetic CDT/enhanced chemical therapy toward uveal melanoma based on a dual-modal imaging-guided manganese metal–organic framework nanoparticles
Yue Li, Fang Li, Hui Pan, Xiaolin Huang, Jie Yu, Xueru Liu, Qinghao Zhang, Caiwen Xiao, He Zhang & Leilei Zhang
Additional file1: Fig. S1. OUM1 knockdown impairs UM cell metastasis and proliferation. Fig. S2. GO and pathway function analysis. Fig. S3. Bioinformatics analysis of OUM1 targets. Fig. S4. PTPRZ1 might be a target of OUM1. Fig. S5. Synergistic effect of SOV and OUM1 interference on apoptosis. Fig. S6. In vivo toxicity evaluation. Table S1. Downregulated and Upregulated gene. Table S2. Primers and siRNA used in this study. Table S3. Primers used in RNA-ChIP assay. Details...
Molecular detection and identification of relapsing fever Borrelia in ticks and wild small mammals in China
Xiao-Ai Zhang, Feng Tian, Yue Li, Xiao-Long Zhang, Bao-Gui Jiang, Bao-Cheng Liu, Jing-Tao Zhang, Shen Tian, Heng Ding, Shuang Li, Hao Li, Li-Qun Fang & Wei Liu
We identified relapsing fever (RF) Borrelia in 1.45% (145/10426) of the ticks and 1.40% (40/2850) of the wild mammals in a field investigation in China. Three RF Borrelia species, including human-pathogenic Borrelia miyamotoi, Borrelia persica and unclassified Babesia sp. were determined. Main species determined from ticks was B. miyamotoi (44.14%), followed by the unclassified Borrelia sp. (42.76%), and Borrelia theileri (13.10%). In wild mammals, main species found was B. persica (57.50%), followed by the unclassified...
Additional file 4 of SWI/SNF complex gene variations are associated with a higher tumor mutational burden and a better response to immune checkpoint inhibitor treatment: a pan-cancer analysis of next-generation sequencing data corresponding to 4591 cases
Yue Li, Xinhua Yang, Weijie Zhu, Yuxia Xu, Jiangjun Ma, Caiyun He & Fang Wang
Additional file 4: Table S1. Synthetic lethal interactive pairs and chemical inhibitors involving SWI/SNF members.
Facing hierarchy: a qualitative study of residents’ experiences in an obstetrical simulation scenario
Adam B. Garber, Glenn Posner, Taylor Roebotham, M. Dylan Bould & Taryn Taylor
Abstract Background Residents in surgical specialties face a steep hierarchy when managing medical crises. Hierarchy can negatively impact patient safety when team members are reluctant to speak up. Yet, simulation has scarcely been previously utilized to qualitatively explore the way residents in surgical specialities navigate this challenge. The study aimed to explore the experiences of residents in one surgical specialty, obstetrics and gynecology (Ob/Gyn), when challenging hierarchy, with the goal of informing future interventions to...
Additional file 1 of Facing hierarchy: a qualitative study of residents’ experiences in an obstetrical simulation scenario
Adam B. Garber, Glenn Posner, Taylor Roebotham, M. Dylan Bould & Taryn Taylor
Additional file 1. Themes and sample illustrative quotations of the communication strategies and coping mechanism categories.
Evidence on the social, economic, and environmental impact of interventions that facilitate bamboo industry development for sustainable livelihoods: a systematic map protocol
Lucy Binfield, Tamara L. Britton, Chunping Dai & John Innes
Abstract Background Bamboo has been identified as a potential instrument for socioeconomic development due to its fast growth, perceived environmental benefits, promising material properties, myriad applications, and relative underdevelopment as a global industrial product. Many projects and interventions have been carried out that aim to utilize bamboo’s social and environmental potential in development. However, critical evaluations that demonstrate this effect using real-world evidence and outcomes are rare, and existing case studies have not been collated...
sj-docx-1-mso-10.1177_20552173221128170 - Supplemental material for Autoimmune diseases and cancers overlapping with myelin oligodendrocyte glycoprotein antibody-associated disease (MOGAD): A systematic review
Negar Molazadeh, Gauruv Bose, Itay Lotan & Michael Levy
Supplemental material, sj-docx-1-mso-10.1177_20552173221128170 for Autoimmune diseases and cancers overlapping with myelin oligodendrocyte glycoprotein antibody-associated disease (MOGAD): A systematic review by Negar Molazadeh, Gauruv Bose, Itay Lotan and Michael Levy in Multiple Sclerosis Journal – Experimental, Translational and Clinical
Autoimmune diseases and cancers overlapping with myelin oligodendrocyte glycoprotein antibody-associated disease (MOGAD): A systematic review
Negar Molazadeh, Gauruv Bose, Itay Lotan & Michael Levy
BackgroundMyelin oligodendrocyte glycoprotein antibody-associated disease (MOGAD) has various similarities with AQP4-IgG-seropositive Neuromyelitis Optica Spectrum Disorder (AQP4-IgG + NMOSD) in terms of clinical presentations, magnetic resonance imaging (MRI) findings, and response to treatment. But unlike AQP4-IgG + NMOSD, which is known to coexist with various autoimmune diseases and cancers, an association of MOGAD with these conditions is less clear.MethodsWe conducted a systematic search in PubMed, Scopus, Web of Science, and Embase based on the preferred reporting...
Additional file 13 of Comparative transcriptomic analysis provides insights into the molecular basis underlying pre-harvest sprouting in rice
Dong Liu, Mingyang Zeng, Yan Wu, Yanli Du, Jianming Liu, Shaoqiang Luo & Yongjun Zeng
Additional file 13: Table S12. The list of representative DEGs related to phenylpropanoid biosynthesis.
Additional file 15 of Comparative transcriptomic analysis provides insights into the molecular basis underlying pre-harvest sprouting in rice
Dong Liu, Mingyang Zeng, Yan Wu, Yanli Du, Jianming Liu, Shaoqiang Luo & Yongjun Zeng
Additional file 15: Table S14. Primers used for quantitative real-time PCR in this study.
A scoping review of virtual synchronous intervention studies in preschool rehabilitation
Kathryn Hatherly, Danielle Glista, Daniela Testani, Laura Brunton & Barbara Jane Cunningham
To summarize the available evidence for the delivery of synchronous virtual rehabilitation intervention services for preschoolers and to identify key factors associated with virtual intervention. Five databases were searched to identify peer-reviewed articles that assessed virtual interventions for preschoolers delivered by rehabilitation health professionals including physical therapists, occupational therapists, speech-language pathologists, audiologists, and their associated assistants. Relevant data regarding demographics, technology, mode of service delivery, timing, engagement, and measurement data were extracted, and charted. Data...
Table S1
Narges Alipanah-Lechner, Lucile Neyton, Eran Mick, Andrew Willmore, Aleksandra Leligdowicz, Kevin Contrepois, Alejandra Jauregui, Hanjing Zhuo, Carolyn Hendrickson, Antonio Gomez, Pratik Sinha, Kirsten N. Kangelaris, Kathleen D. Liu, Michael A Matthay, Angela Rogers & Carolyn S. Calfee
Metabolites with differential abundance in the hyperinflammatory ARDS phenotype compared to the hypoinflammatory phenotype based on unadjusted analyses. Metabolites are listed in order of increasing log2 fold change.
Table S1
Narges Alipanah-Lechner, Lucile Neyton, Eran Mick, Andrew Willmore, Aleksandra Leligdowicz, Kevin Contrepois, Alejandra Jauregui, Hanjing Zhuo, Carolyn Hendrickson, Antonio Gomez, Pratik Sinha, Kirsten N. Kangelaris, Kathleen D. Liu, Michael A Matthay, Angela Rogers & Carolyn S. Calfee
Metabolites with differential abundance in the hyperinflammatory ARDS phenotype compared to the hypoinflammatory phenotype based on unadjusted analyses. Metabolites are listed in order of increasing log2 fold change.
Additional file 4 of A novel nomogram to stratify quality of life among advanced cancer patients with spinal metastatic disease after examining demographics, dietary habits, therapeutic interventions, and mental health status
Yue Li, Ze Long, Xiuju Wang, Mingxing Lei, Chunzi Liu, Xiaolin Shi & Yaosheng Liu
Additional file 4.
Additional file 1 of A novel nomogram to stratify quality of life among advanced cancer patients with spinal metastatic disease after examining demographics, dietary habits, therapeutic interventions, and mental health status
Yue Li, Ze Long, Xiuju Wang, Mingxing Lei, Chunzi Liu, Xiaolin Shi & Yaosheng Liu
Additional file 1.
Additional file 8 of A novel nomogram to stratify quality of life among advanced cancer patients with spinal metastatic disease after examining demographics, dietary habits, therapeutic interventions, and mental health status
Yue Li, Ze Long, Xiuju Wang, Mingxing Lei, Chunzi Liu, Xiaolin Shi & Yaosheng Liu
Additional file 8.
Additional file 1 of The impact of funding models on the integration of registered nurses in primary health care teams: protocol for a multi-phase mixed-methods study in Canada
Maria Mathews, Sarah Spencer, Lindsay Hedden, Julia Lukewich, Marie-Eve Poitras, Emily Gard Marshall, Judith Belle Brown, Shannon Sibbald & Alison A. Norful
Additional file 1. Case Study Interview Guides.
Transcriptomic analysis of the innate immune signatures of a SARS-CoV-2 protein subunit vaccine ZF2001 and an mRNA vaccine RRV
Qian Wang, Ziyang Song, Jinghuan Yang, Qian He, Qunying Mao, Yu Bai, Jianyang Liu, Chaoqiang An, Xujia Yan, Bopei Cui, Lifang Song, Dong Liu, Miao Xu & Zhenglun Liang
Analysis of large-scale gene expression post vaccination can provide an overview of immune responses. We used transcriptional approaches to comprehensively analyze the innate immune response signatures elicited by protein subunit (PS) vaccine ZF2001 and an mRNA vaccine named RRV. A fine-grained time-dependent dissection of large-scale gene expression post immunization revealed that ZF001 induced MHC class II-related genes, including cd74 and H2-Aa, more expeditiously than the RRV. Notably, the RRV induced MHC class I-related genes such...
sj-docx-1-tab-10.1177_1759720X221131604 – Supplemental material for Early Osteoarthritis Questionnaire (EOAQ): a tool to assess knee osteoarthritis at initial stage
Alberto Migliore, Liudmila Alekseeva, Sachin R. Avasthi, Raveendhara R. Bannuru, Xavier Chevalier, Thierry Conrozier, Sergio Crimaldi, Gustavo C. de Campos, Demirhan Diracoglu, Gianfranco Gigliucci, Gabriel Herrero-Beaumont, Giovanni Iolascon, Ruxandra Ionescu, Jörg Jerosch, Jorge Lains, Emmanuel Maheu, Souz Makri, Natalia Martusevich, Marco Matucci-Cerinic, Karen Pavelka, Robert J. Petrella, Raghu Raman & Umberto Tarantino
Supplemental material, sj-docx-1-tab-10.1177_1759720X221131604 for Early Osteoarthritis Questionnaire (EOAQ): a tool to assess knee osteoarthritis at initial stage by Alberto Migliore, Liudmila Alekseeva, Sachin R. Avasthi, Raveendhara R. Bannuru, Xavier Chevalier, Thierry Conrozier, Sergio Crimaldi, Gustavo C. de Campos, Demirhan Diracoglu, Gianfranco Gigliucci, Gabriel Herrero-Beaumont, Giovanni Iolascon, Ruxandra Ionescu, Jörg Jerosch, Jorge Lains, Emmanuel Maheu, Souz Makri, Natalia Martusevich, Marco Matucci-Cerinic, Karen Pavelka, Robert J. Petrella, Raghu Raman and Umberto Tarantino in Therapeutic Advances in Musculoskeletal...
Data from: Complex interactions between temperature, sexual signals, and mate choice in a desert-dwelling jumping spider
Erin Brandt, Malcolm Rosenthal & Damian Elias
Environmental context is a crucial factor that influences sexual communication systems. Particularly in ectotherms, which cannot metabolically regulate their body temperature, temperature has an outsized effect on these intraspecific interactions. Using a desert-dwelling jumping spider Habronattus clypeatus, we assessed how temperature impacts various parts of the male signal and female mate choice for the signal. These spiders have multimodal, temporally-structured courtship displays that begin with visual-only “sidling” displays and proceed to multimodal visual and vibratory...
A comparative study on DNA and protein binding properties of thymol and thymoquinone
Syed Ismattowaha Parvin, Md. Kalimuddin Mandal, Priyanka Gopi, Shweta Singh, Mahammad Rizwan Khan, Prateek Pandya, Md. Maidul Islam & Harun Al Rasid Gazi
Two phytochemicals, thymol and thymoquinone obtained from thymes (Thymus vulgaris L., Lamiaceae etc.) and Nagila Sativa seed, respectively. Both the phytochemicals show several biochemical activities like anticancer, antimicrobial etc. In this paper, we studied the affinities of thymol and thymoquinone towards calf thymus DNA (CT-DNA) and protein (bovine serum albumin). Spectroscopic and molecular modelling studies revealed that both compounds have a high affinity toward both the receptors; DNA and protein. Both phytochemicals binds to the...
Wild Panax plants adapt to their thermal environment by harboring abundant beneficial seed endophytic bacteria
Dong Liu, Liang Lin, Tie Zhang, Qian Xue, Mulan Wang, Minghai Gao, Parag Bhople, Hugh W. Pritchard, Xiangyun Yang & Fuqiang Yu
The seed microbiome of crop wild relatives is a potential reservoir of beneficial traits that potentially improve their host plant resilience to fluctuating environments and pathogenic threats. Herein, we studied the seed microbiome of three species of the medicinal genus Panax (P. vietnamensis, P. japonicas, and P. stipuleanatus) collected from seven locations in Southwest China. We used qPCR and metabarcoding high-throughput sequencing to target both endophytic bacteria and fungi. Seed bacterial absolute abundance (1.1 ×...
Additional file 5 of Comparative transcriptomic analysis provides insights into the molecular basis underlying pre-harvest sprouting in rice
Dong Liu, Mingyang Zeng, Yan Wu, Yanli Du, Jianming Liu, Shaoqiang Luo & Yongjun Zeng
Additional file 5: Table S4. The list of annotated DEGs identified in MXXZ-T vs. JXZ-T.
Additional file 5 of Comparative transcriptomic analysis provides insights into the molecular basis underlying pre-harvest sprouting in rice
Dong Liu, Mingyang Zeng, Yan Wu, Yanli Du, Jianming Liu, Shaoqiang Luo & Yongjun Zeng
Additional file 5: Table S4. The list of annotated DEGs identified in MXXZ-T vs. JXZ-T.
Affiliations
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Western University517
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Soochow University151
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Sun Yat-sen University125
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Sun Yat-sen University Cancer Center125
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Xuzhou Medical College125
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Shandong Agricultural University123
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Sixth Affiliated Hospital of Sun Yat-sen University119
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First Affiliated Hospital of Soochow University119
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McGill University118
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Tianjin Medical University General Hospital111