23 Works
Data from: Climate outweighs native vs. non-native range-effects for genetics and common garden performance of a cosmopolitan weed
Christoph Rosche, Isabell Hensen, Adrian Schaar, Uzma Zehra, Marie Jasieniuk, Ragan M. Callaway, Damase P. Khasa, Mohammad M. Al-Gharaibeh, Ylva Lekberg, David U. Nagy, Robert W. Pal, Miki Okada, Karin Schrieber, Kathryn G. Turner, Susanne Lachmuth, Andrey Erst, Tomonori Tsunoda, Min Sheng, Robin Schmidt, Yanling Peng, Wenbo Luo, Yun Jäschke, Zafar A. Reshi & Manzoor A. Shah
Comparing genetic diversity, genetic differentiation and performance between native and non-native populations has advanced our knowledge of contemporary evolution and its ecological consequences. However, such between-range comparisons can be complicated by high among-population variation within native and non-native ranges. For example, native vs. non-native comparisons between small and non-representative subsets of populations for species with very large distributions have the potential to mislead because they may not sufficiently account for within-range adaptation to climatic conditions,...
Additional file 2 of A multi-country study on the impact of sex and age on oral features of COVID-19 infection in adolescents and young adults
Heba Jafar Sabbagh, Wafaa Abdelaziz, Maryam Quritum, Rana Abdullah Alamoudi, Nada Abu Bakr AlKhateeb, Joud Abourdan, Nafeesa Qureshi, Shabnum Qureshi, Ahmed H. N. Hamoud, Nada Mahmoud, Ruba Odeh, Nuraldeen Maher Al-Khanati, Rawiah Jaber, Abdulrahman Loaie Balkhoyor, Mohammed Shabi, Morenike Oluwatoyin Folayan, Omolola Alade, Noha Gomaa, Raqiya Alnahdi, Nawal A. Mahmoud, Hanane El Wazziki, Manal Alnaas, Bahia Samodien, Rawa A. Mahmoud, Nour Abu Assab … & Maha El Tantawi
Additional file 2.
Data from: Low genetic diversity despite multiple introductions of the invasive plant species Impatiens glandulifera in Europe
Jenny Hagenblad, Jennifer Hülskötter, Kamal Prasad Acharya, Jörg Brunet, Olivier Chabrerie, Sara A. O. Cousins, Pervaiz A. Dar, Martin Diekmann, Pieter De Frenne, Martin Hermy, Aurélien Jamoneau, Annette Kolb, Isgard Lemke, Jan Plue, Zafar A. Reshi & Bente Jessen Graae
Background: Invasive species can be a major threat to native biodiversity and the number of invasive plant species is increasing across the globe. Population genetic studies of invasive species can provide key insights into their invasion history and ensuing evolution, but also for their control. Here we genetically characterise populations of Impatiens glandulifera, an invasive plant in Europe that can have a major impact on native plant communities. We compared populations from the species’ native...
A multi-country study on the impact of sex and age on oral features of COVID-19 infection in adolescents and young adults
Heba Jafar Sabbagh, Wafaa Abdelaziz, Maryam Quritum, Rana Abdullah Alamoudi, Nada Abu Bakr AlKhateeb, Joud Abourdan, Nafeesa Qureshi, Shabnum Qureshi, Ahmed H. N. Hamoud, Nada Mahmoud, Ruba Odeh, Nuraldeen Maher Al-Khanati, Rawiah Jaber, Abdulrahman Loaie Balkhoyor, Mohammed Shabi, Morenike Oluwatoyin Folayan, Omolola Alade, Noha Gomaa, Raqiya Alnahdi, Nawal A. Mahmoud, Hanane El Wazziki, Manal Alnaas, Bahia Samodien, Rawa A. Mahmoud, Nour Abu Assab … & Maha El Tantawi
Abstract Background Oral diseases are features of COVID-19 infection. There is, however, little known about oral diseases associated with COVID-19 in adolescents and young adults (AYA). Therefore, the aim of this study was to assess oral lesions’ association with COVID-19 infection in AYA; and to identify if sex and age will modify these associations. Methodology Data was collected for this cross-sectional study between August 2020 and January 2021 from 11-to-23 years old participants in 43-countries...
Identification of novel inhibitors of tetranectin–plasminogen interaction to suppress breast cancer invasion: an integrated computational and cell-based investigation
Asif Amin, Asif Lone, Faizah Farooq, Umer Majeed Wani, Fizallah Kawoosa & Raies A. Qadri
Tetranectin–plasminogen interaction plays a defining role in extracellular matrix degradation, enabling tumor cell invasion and metastasis. This interaction occurs via the carbohydrate recognition domain (CRD) and Kringle 4 domain of tetranectin and plasminogen, respectively, leading to activation of the plasminogen-cascade that triggers the proteolytic processes. Thus targeting this interaction represents an important strategy to suppress tumor cell migration and invasion. In this direction, we attempted to target the CRD of tetranectin to inhibit its interaction...
Additional file 1 of Is self-reported depression, HIV status, COVID-19 health risk profile and SARS-CoV-2 exposure associated with difficulty in adhering to COVID-19 prevention measures among residents in West Africa?
Morenike Oluwatoyin Folayan, Roberto Ariel Abeldaño Zuniga, Giuliana Florencia Abeldaño, Mir Faeq Ali Quadri, Mohammed Jafer, Muhammad Abrar Yousaf, Passent Ellakany, Ntombifuthi Nzimande, Eshrat Ara, Nuraldeen Maher Al-Khanati, Zumama Khalid, Folake Lawal, Mark Roque, Joanne Lusher, Bamidele O. Popoola, Abeedha Tu-Allah Khan, Martin Amogre Ayanore, Balgis Gaffar, Jorma I. Virtanen, Nourhan M. Aly, Joseph Chukwudi Okeibunor, Maha El Tantawi & Annie Lu Nguyen
Additional file 1. List of countries in West Africa number of respondents included in the analysis.
AMS dates and Neolithic cereal measurements from the Kashmir Prehistory Project
Michael Spate, Mumtaz Yatoo & Alison Betts
The Kashmir Valley is understood to be an important centre of early agriculture in the Western Himalayas. Direct dates of prehistoric cereal remains indicate the valley as a likely route of transmission of agricultural systems between South, Central and East Asia. The movement of these crops into novel mountain environments may have exerted environmental stresses influencing the morphology of cereal crops. This dataset presents AMS dates and measurements of carbonised cereal remains from prehistoric sites...
Is self-reported depression, HIV status, COVID-19 health risk profile and SARS-CoV-2 exposure associated with difficulty in adhering to COVID-19 prevention measures among residents in West Africa?
Morenike Oluwatoyin Folayan, Roberto Ariel Abeldaño Zuniga, Giuliana Florencia Abeldaño, Mir Faeq Ali Quadri, Mohammed Jafer, Muhammad Abrar Yousaf, Passent Ellakany, Ntombifuthi Nzimande, Eshrat Ara, Nuraldeen Maher Al-Khanati, Zumama Khalid, Folake Lawal, Mark Roque, Joanne Lusher, Bamidele O. Popoola, Abeedha Tu-Allah Khan, Martin Amogre Ayanore, Balgis Gaffar, Jorma I. Virtanen, Nourhan M. Aly, Joseph Chukwudi Okeibunor, Maha El Tantawi & Annie Lu Nguyen
Abstract Background The aim of this study was to determine whether self-reported depression, coronavirus disease of 2019 (COVID-19) health risk profile, HIV status, and SARS-CoV-2 exposure were associated with the use of COVID-19 prevention measures. Methods This survey collected data electronically between June 29 and December 31, 2020 from a convenient sample of 5050 adults 18 years and above living in 12 West African countries. The dependent variables were: social distancing, working remotely, difficulty obtaining...
Identification of novel inhibitors of tetranectin–plasminogen interaction to suppress breast cancer invasion: an integrated computational and cell-based investigation
Asif Amin, Asif Lone, Faizah Farooq, Umer Majeed Wani, Fizallah Kawoosa & Raies A. Qadri
Tetranectin–plasminogen interaction plays a defining role in extracellular matrix degradation, enabling tumor cell invasion and metastasis. This interaction occurs via the carbohydrate recognition domain (CRD) and Kringle 4 domain of tetranectin and plasminogen, respectively, leading to activation of the plasminogen-cascade that triggers the proteolytic processes. Thus targeting this interaction represents an important strategy to suppress tumor cell migration and invasion. In this direction, we attempted to target the CRD of tetranectin to inhibit its interaction...
Additional file 1 of Identification of key transcription factors and their functional role involved in Salmonella typhimurium infection in chicken using integrated transcriptome analysis and bioinformatics approach
Syed Mudasir Ahmad, Sahar Saleem Bhat, Shaista Shafi, Mashooq Ahmad Dar, Afnan Saleem, Zulfqarul Haq, Nida Farooq, Junaid Nazir & Basharat Bhat
Additional file 1: Supplementary figure 1. The PCA plot shows between different samples. This plot shows clear separation between samples. Supplementary table 1. Downloaded RNA-Seq data from Mashooq et al 2022 UR_Genomics_submission number (NCBI Accession number GSE 168060).
Species abundance along the railway of Kashmir Himalaya
Irfan Rashid, Marifatul Shiekh, Jonas Lembrechts, Anzar Khuroo, Anibal Pauchard & Jeffrey Dukes
1. The significant portion of global terrestrial biodiversity harbored in mountains is under increasing threat from a variety of anthropogenic impacts. Protecting fragile mountain ecosystems requires understanding how these human disturbances affect biodiversity. As roads and railways are extended further into mountain ecosystems, understanding the long-term impacts of this infrastructure on community composition and diversity gains urgency. 2. We used railway corridors constructed across the mountainous landscapes of the Kashmir Himalaya from 1994-2013 to study...
Additional file 1 of A multi-country study on the impact of sex and age on oral features of COVID-19 infection in adolescents and young adults
Heba Jafar Sabbagh, Wafaa Abdelaziz, Maryam Quritum, Rana Abdullah Alamoudi, Nada Abu Bakr AlKhateeb, Joud Abourdan, Nafeesa Qureshi, Shabnum Qureshi, Ahmed H. N. Hamoud, Nada Mahmoud, Ruba Odeh, Nuraldeen Maher Al-Khanati, Rawiah Jaber, Abdulrahman Loaie Balkhoyor, Mohammed Shabi, Morenike Oluwatoyin Folayan, Omolola Alade, Noha Gomaa, Raqiya Alnahdi, Nawal A. Mahmoud, Hanane El Wazziki, Manal Alnaas, Bahia Samodien, Rawa A. Mahmoud, Nour Abu Assab … & Maha El Tantawi
Additional file 1.
Additional file 2 of A multi-country study on the impact of sex and age on oral features of COVID-19 infection in adolescents and young adults
Heba Jafar Sabbagh, Wafaa Abdelaziz, Maryam Quritum, Rana Abdullah Alamoudi, Nada Abu Bakr AlKhateeb, Joud Abourdan, Nafeesa Qureshi, Shabnum Qureshi, Ahmed H. N. Hamoud, Nada Mahmoud, Ruba Odeh, Nuraldeen Maher Al-Khanati, Rawiah Jaber, Abdulrahman Loaie Balkhoyor, Mohammed Shabi, Morenike Oluwatoyin Folayan, Omolola Alade, Noha Gomaa, Raqiya Alnahdi, Nawal A. Mahmoud, Hanane El Wazziki, Manal Alnaas, Bahia Samodien, Rawa A. Mahmoud, Nour Abu Assab … & Maha El Tantawi
Additional file 2.
Additional file 1 of Is self-reported depression, HIV status, COVID-19 health risk profile and SARS-CoV-2 exposure associated with difficulty in adhering to COVID-19 prevention measures among residents in West Africa?
Morenike Oluwatoyin Folayan, Roberto Ariel Abeldaño Zuniga, Giuliana Florencia Abeldaño, Mir Faeq Ali Quadri, Mohammed Jafer, Muhammad Abrar Yousaf, Passent Ellakany, Ntombifuthi Nzimande, Eshrat Ara, Nuraldeen Maher Al-Khanati, Zumama Khalid, Folake Lawal, Mark Roque, Joanne Lusher, Bamidele O. Popoola, Abeedha Tu-Allah Khan, Martin Amogre Ayanore, Balgis Gaffar, Jorma I. Virtanen, Nourhan M. Aly, Joseph Chukwudi Okeibunor, Maha El Tantawi & Annie Lu Nguyen
Additional file 1. List of countries in West Africa number of respondents included in the analysis.
Identification of key transcription factors and their functional role involved in Salmonella typhimurium infection in chicken using integrated transcriptome analysis and bioinformatics approach
Syed Mudasir Ahmad, Sahar Saleem Bhat, Shaista Shafi, Mashooq Ahmad Dar, Afnan Saleem, Zulfqarul Haq, Nida Farooq, Junaid Nazir & Basharat Bhat
Abstract Salmonella enterica serovar typhimurium is the cause of significant morbidity and mortality worldwide that causes economic losses to poultry and is able to cause infection in humans. Indigenous chicken breeds are a potential source of animal protein and have the added advantage of being disease resistant. An indigenous chicken, Kashmir favorella and commercial broiler were selected for understanding the mechanism of disease resistance. Following infection in Kashmir favorella, three differentially expressed genes Nuclear Factor...
Data for: Vegetation and soil ecology of threatened Himalayan Trillium habitats in Kashmir, Himalaya
Kausar Rashid, Sufiya Rashid, Tajamul Islam, Aijaz Ganie, Irshad Nawchoo & Anzar Khuroo
Understanding the vegetation and soil ecology of natural habitats harbouring threatened species is critical in conservation planning and restoration. The present study investigated the vegetation composition and soil physico-chemical attributes of natural habitats of Trillium govanianum – a threatened Himalayan endemic species. We laid 120 quadrats across eight randomly selected sites where the species was growing in the Kashmir Himalaya. We collected the soil samples from these sites and determined soil physico-chemical attributes using standard...
Is self-reported depression, HIV status, COVID-19 health risk profile and SARS-CoV-2 exposure associated with difficulty in adhering to COVID-19 prevention measures among residents in West Africa?
Morenike Oluwatoyin Folayan, Roberto Ariel Abeldaño Zuniga, Giuliana Florencia Abeldaño, Mir Faeq Ali Quadri, Mohammed Jafer, Muhammad Abrar Yousaf, Passent Ellakany, Ntombifuthi Nzimande, Eshrat Ara, Nuraldeen Maher Al-Khanati, Zumama Khalid, Folake Lawal, Mark Roque, Joanne Lusher, Bamidele O. Popoola, Abeedha Tu-Allah Khan, Martin Amogre Ayanore, Balgis Gaffar, Jorma I. Virtanen, Nourhan M. Aly, Joseph Chukwudi Okeibunor, Maha El Tantawi & Annie Lu Nguyen
Abstract Background The aim of this study was to determine whether self-reported depression, coronavirus disease of 2019 (COVID-19) health risk profile, HIV status, and SARS-CoV-2 exposure were associated with the use of COVID-19 prevention measures. Methods This survey collected data electronically between June 29 and December 31, 2020 from a convenient sample of 5050 adults 18 years and above living in 12 West African countries. The dependent variables were: social distancing, working remotely, difficulty obtaining...
Additional file 1 of A multi-country study on the impact of sex and age on oral features of COVID-19 infection in adolescents and young adults
Heba Jafar Sabbagh, Wafaa Abdelaziz, Maryam Quritum, Rana Abdullah Alamoudi, Nada Abu Bakr AlKhateeb, Joud Abourdan, Nafeesa Qureshi, Shabnum Qureshi, Ahmed H. N. Hamoud, Nada Mahmoud, Ruba Odeh, Nuraldeen Maher Al-Khanati, Rawiah Jaber, Abdulrahman Loaie Balkhoyor, Mohammed Shabi, Morenike Oluwatoyin Folayan, Omolola Alade, Noha Gomaa, Raqiya Alnahdi, Nawal A. Mahmoud, Hanane El Wazziki, Manal Alnaas, Bahia Samodien, Rawa A. Mahmoud, Nour Abu Assab … & Maha El Tantawi
Additional file 1.
A multi-country study on the impact of sex and age on oral features of COVID-19 infection in adolescents and young adults
Heba Jafar Sabbagh, Wafaa Abdelaziz, Maryam Quritum, Rana Abdullah Alamoudi, Nada Abu Bakr AlKhateeb, Joud Abourdan, Nafeesa Qureshi, Shabnum Qureshi, Ahmed H. N. Hamoud, Nada Mahmoud, Ruba Odeh, Nuraldeen Maher Al-Khanati, Rawiah Jaber, Abdulrahman Loaie Balkhoyor, Mohammed Shabi, Morenike Oluwatoyin Folayan, Omolola Alade, Noha Gomaa, Raqiya Alnahdi, Nawal A. Mahmoud, Hanane El Wazziki, Manal Alnaas, Bahia Samodien, Rawa A. Mahmoud, Nour Abu Assab … & Maha El Tantawi
Abstract Background Oral diseases are features of COVID-19 infection. There is, however, little known about oral diseases associated with COVID-19 in adolescents and young adults (AYA). Therefore, the aim of this study was to assess oral lesions’ association with COVID-19 infection in AYA; and to identify if sex and age will modify these associations. Methodology Data was collected for this cross-sectional study between August 2020 and January 2021 from 11-to-23 years old participants in 43-countries...
Exploring the Experiences of Women on Muslim Pilgrimage: A Study of Hazaratbal Shrine in Kashmir
Ab Qayoom Shah & Aneesa ShafiData from: Effect of altitude on volatile organic and phenolic compounds of artemisia brevifolia wall ex Dc. from the Western Himalayas
Nandita Nataraj, Manzoor Hussain, Mohd Ibrahim, Alexander E. Hausmann, Srinivas Rao, Satwinderjeet Kaur, Jabeena Khazir, Bilal Ahmad Mir & Shannon B. Olsson
Adaptation to changing environmental conditions is a driver of plant diversification. Elevational gradients offer a unique opportunity for investigating adaptation to a range of climatic conditions. The use of specialized metabolites as volatile and phenolic compounds is a major adaptation in plants, affecting their reproductive success and survival by attracting pollinators and protecting themselves from herbivores and other stressors. The wormseed Artemisia brevifolia can be found across multiple elevations in the Western Himalayas, a region...
Additional file 1 of Identification of key transcription factors and their functional role involved in Salmonella typhimurium infection in chicken using integrated transcriptome analysis and bioinformatics approach
Syed Mudasir Ahmad, Sahar Saleem Bhat, Shaista Shafi, Mashooq Ahmad Dar, Afnan Saleem, Zulfqarul Haq, Nida Farooq, Junaid Nazir & Basharat Bhat
Additional file 1: Supplementary figure 1. The PCA plot shows between different samples. This plot shows clear separation between samples. Supplementary table 1. Downloaded RNA-Seq data from Mashooq et al 2022 UR_Genomics_submission number (NCBI Accession number GSE 168060).
Identification of key transcription factors and their functional role involved in Salmonella typhimurium infection in chicken using integrated transcriptome analysis and bioinformatics approach
Syed Mudasir Ahmad, Sahar Saleem Bhat, Shaista Shafi, Mashooq Ahmad Dar, Afnan Saleem, Zulfqarul Haq, Nida Farooq, Junaid Nazir & Basharat Bhat
Abstract Salmonella enterica serovar typhimurium is the cause of significant morbidity and mortality worldwide that causes economic losses to poultry and is able to cause infection in humans. Indigenous chicken breeds are a potential source of animal protein and have the added advantage of being disease resistant. An indigenous chicken, Kashmir favorella and commercial broiler were selected for understanding the mechanism of disease resistance. Following infection in Kashmir favorella, three differentially expressed genes Nuclear Factor...